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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:995490..996549+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000350-T1 ID=CBS51388_000350-T1|Name=CBS51388_000350-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1060bp|location=Sequence derived from alignment at An01:995490..996549+ (Aspergillus niger CBS 513.88)
ATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGC
CCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCA
GCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTC
GTCCTGATGGGTAAGAACACCATGGTATGATGATCCTCTGAAACCACCGG
TGCCCGTTCCGCATGCTGATGAGTTGTCCAGGTTCGCCGTGCCATCAAGG
GCTTCGTCAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAG
GGTAAGTGAAGTTGCTTCCAGAGTCTGCGGCGATGTCAATTGGCTAACAT
TTGCCTTCCGCACAGGTAACGTTGGTTTCATCTTCACCAACGGTGACCTC
AAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTCCCGCTCG
TGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGTAACACCG
GTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGTCCCCACC
AAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGCTCGTTGA
GGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAACATGCTGA
ACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTACGACCAG
GGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTCAGCTCCT
CGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCCCTGGCTG
TCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAACAGCTAC
AAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGCCCGAGAT
TGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCCTCCGCTG
CTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGCCGCTGAG
GCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCTTCGGCCT
CTTCGACTAA back to topCoding sequence (CDS) from alignment at An01:995490..996549+ >CBS51388_000350-T1 ID=CBS51388_000350-T1|Name=CBS51388_000350-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2817bp|location=Sequence derived from alignment at An01:995490..996549+ (Aspergillus niger CBS 513.88)
ATGGGGGGCAAGTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGC
CCTTCTCGATGAGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCA
GCTCTCAGCAGATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTC
GTCCTGATGGGTAAGAACACCATGGTTCGCCGTGCCATCAAGGGCTTCGT
CAACGACAACCCCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGGTAACG
TTGGTTTCATCTTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATC
CTGGCCAACCGTGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGG
CGATGTCTGGGTCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCT
CTTTCTTCCAGGCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATT
GAAATTACCACCGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCC
CTCCGAGGCCACCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATG
GTATGACCATCCAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCT
GTCCTGGACATTGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCAT
TAACACCATCACCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCG
CTGTCATGCACTCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCT
GTTGAGACCGAGTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTAT
TGCCAACCCTGACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCC
CTGCTGCCGGTGGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAG
GAGTCCGATGAGGACATGGGCTTCGGCCTCTTCGACTAAATGGGGGGCAA
GTCTGCTACCAAGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTCGATG
AGTACAAGACGGTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCAGCAG
ATGCACGAGATTCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGATGGG
TAAGAACACCATGGTTCGCCGTGCCATCAAGGGCTTCGTCAACGACAACC
CCGAGTACGAGCGTCTGCTCCCCTTCGTTAAGGGTAACGTTGGTTTCATC
TTCACCAACGGTGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCG
TGTCGCTGCTCCCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGG
TCCCCGCCGGTAACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAG
GCTCTTGGTGTCCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCAC
CGACCTCAAGCTCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCA
CCCTGCTCAACATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATC
CAGCAGGTCTACGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACAT
TGAGGAGTCTCAGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCA
CCACCATCTCCCTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCAC
TCCCTCGTCAACAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGA
GTACAGCTGGCCCGAGATTGAGGAGCTCAAGGACCGTATTGCCAACCCTG
ACGCTTACGCCTCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGT
GGTGCTCCCGCCGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTCCGATGA
GGACATGGGCTTCGGCCTCTTCGACTAAATGGGGGGCAAGTCTGCTACCA
AGGCCGCTTACTTCGAGAAGCTCAAGGCCCTTCTCGATGAGTACAAGACG
GTCTTCATTGTCGGTGTCGACAATGTCAGCTCTCAGCAGATGCACGAGAT
TCGTCTGAGTCTCCGTGGCGAGGGTGTCGTCCTGATGGGTAAGAACACCA
TGGTTCGCCGTGCCATCAAGGGCTTCGTCAACGACAACCCCGAGTACGAG
CGTCTGCTCCCCTTCGTTAAGGGTAACGTTGGTTTCATCTTCACCAACGG
TGACCTCAAGGCCACCAAGGAGAAGATCCTGGCCAACCGTGTCGCTGCTC
CCGCTCGTGCCGGTGCCATCGCTCCTGGCGATGTCTGGGTCCCCGCCGGT
AACACCGGTATGGAACCCGGTAAGACCTCTTTCTTCCAGGCTCTTGGTGT
CCCCACCAAGATTGCTCGTGGTACCATTGAAATTACCACCGACCTCAAGC
TCGTTGAGGCTGGAAGCAAGGTCGGTCCCTCCGAGGCCACCCTGCTCAAC
ATGCTGAACATCTCTCCCTTCACCTATGGTATGACCATCCAGCAGGTCTA
CGACCAGGGTCAGTGCTTCAGCTCTGCTGTCCTGGACATTGAGGAGTCTC
AGCTCCTCGAGGCCTTCTCCAGCGCCATTAACACCATCACCACCATCTCC
CTGGCTGTCAGCTACCCCACTATCCCCGCTGTCATGCACTCCCTCGTCAA
CAGCTACAAGAAGGTTCTTGCCGTTGCTGTTGAGACCGAGTACAGCTGGC
CCGAGATTGAGGAGCTCAAGGACCGTATTGCCAACCCTGACGCTTACGCC
TCCGCTGCTCCTGCCGCTGCCGCTGCCCCTGCTGCCGGTGGTGCTCCCGC
CGCTGAGGCTCCCAAGGAGGAAGAGGAGGAGTCCGATGAGGACATGGGCT
TCGGCCTCTTCGACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042254 | ribosome biogenesis |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264G1I |
| DBxref | InterPro:IPR043141 |
| DBxref | InterPro:IPR030670 |
| DBxref | InterPro:IPR001790 |
| DBxref | InterPro:IPR040637 |
| DBxref | InterPro:IPR043164 |
| DBxref | PFAM:PF17777 |
| DBxref | PFAM:PF00466 |
| DBxref | PFAM:PF00428 |
| Product | 60s acidic ribosomal protein P2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:995490..996549 + |
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