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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:997368..998661+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000351-T1 ID=CBS51388_000351-T1|Name=CBS51388_000351-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1294bp|location=Sequence derived from alignment at An01:997368..998661+ (Aspergillus niger CBS 513.88)
ATGCAGCATCAATTCGAGCCATTGAAGAACGACCTCTTGCTGAGGGCTGC
TAGGGGTAATTCTGATTTTAAACCATTATATTCAAAGAGATGGGACTGAT
ATCATTGCAGGCGAGAAAGTCCAGCGTCCTCCGATATGGGTTATGCGGCA
AGGTACGCCTCTCTCTACAAACTACTCTCTTCGCACTCTTACGAGTCCCG
GATCCAAGTATGTCTCTCTTATAACTGACCACATTGTGCTTCTTATATAG
CTGGCCGTTATCTCCCCGAATACCATGAAGCCAAAGCCGGCCGCGACTTT
TTCGAATGCTGCCGCGACCCCGAAGTCGCATCGACGTTGACGATCCAGCC
CATCGACCGCTACGCCGGACTCATCGATGCTGCGATCATCTTCTCCGATA
TTCTGGTCATTCCCCAGGCCATGGGAATGCAGGTTGAGATGGTCGACAAG
AAGGGACCCCACTTCCCCGAGCCGCTCCAGTCGCCCGATGATGGACAGTA
CGAGAAAGTGATGCAGAAGGATGTGGATGTCAAGTCGGAGCTCGACTACG
TCTACAAGGCCATTACCCTCACCCGCCACAAGCTGCAGGGTCGTGTGCCG
TTGATCGGCTTTTGCGGTGCCCCGTGGACTCTGCTGTGCTACATGGTAGA
GGGAGGCGGCACGAAACTGTTCGTCCAGTCGAAGAAGTGGATCTACAAGT
ACCCCAAGGAGTCGCAGGCTCTCCTGCAGAAGATCGCCGAGATCTGTGTT
GAATACCTGGCGCTTCAGGTTGCTGCTGGTGCTCAGCTGGTACAGGTCTT
CGATTCCTGGGCGGGTGAGCTGTCTCCGGCCGCTTTCAAGTCATTCTCTC
TTCCCTACCTGCGTCACATTTCGGCGAATCTGCCGAAGAAGTTGAAGGAG
ATGGGTCTGGAGCCTGTTCCGATGACAGTCTTCGCGAAGGGTGCGTGGTT
TGGTCTTGAGGATCTCTGCGAGTCGGGCTACAATGTTGTTGGCTTGGACT
GGCTGCACGACCCCGCTGAGGCTAGGCGGATTGCCAATGGTCGTGTGACG
ATCCAGGGTAATGCTGACCCTGGTGTTCTCTATGGAGGACGCGAGGCTAT
CACGGAGGCTGTGGAGACTATGGTTCGGGGATTCGAGAAGGGCAAGCAAG
GCTGGATTGCCAACTTGGGTCACGGTGAGCACTGCCACAGCTGGGTTATT
CAATAAATGCTAATGTATCACAGGTGTGACTCCTTTCGTCAACCCGGATG
ATCTCAAGTTCTTCTTCGAAGAGATCCACCGTCTGACGGTCTAA back to topCoding sequence (CDS) from alignment at An01:997368..998661+ >CBS51388_000351-T1 ID=CBS51388_000351-T1|Name=CBS51388_000351-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4368bp|location=Sequence derived from alignment at An01:997368..998661+ (Aspergillus niger CBS 513.88)
ATGCAGCATCAATTCGAGCCATTGAAGAACGACCTCTTGCTGAGGGCTGC
TAGGGGCGAGAAAGTCCAGCGTCCTCCGATATGGGTTATGCGGCAAGCTG
GCCGTTATCTCCCCGAATACCATGAAGCCAAAGCCGGCCGCGACTTTTTC
GAATGCTGCCGCGACCCCGAAGTCGCATCGACGTTGACGATCCAGCCCAT
CGACCGCTACGCCGGACTCATCGATGCTGCGATCATCTTCTCCGATATTC
TGGTCATTCCCCAGGCCATGGGAATGCAGGTTGAGATGGTCGACAAGAAG
GGACCCCACTTCCCCGAGCCGCTCCAGTCGCCCGATGATGGACAGTACGA
GAAAGTGATGCAGAAGGATGTGGATGTCAAGTCGGAGCTCGACTACGTCT
ACAAGGCCATTACCCTCACCCGCCACAAGCTGCAGGGTCGTGTGCCGTTG
ATCGGCTTTTGCGGTGCCCCGTGGACTCTGCTGTGCTACATGGTAGAGGG
AGGCGGCACGAAACTGTTCGTCCAGTCGAAGAAGTGGATCTACAAGTACC
CCAAGGAGTCGCAGGCTCTCCTGCAGAAGATCGCCGAGATCTGTGTTGAA
TACCTGGCGCTTCAGGTTGCTGCTGGTGCTCAGCTGGTACAGGTCTTCGA
TTCCTGGGCGGGTGAGCTGTCTCCGGCCGCTTTCAAGTCATTCTCTCTTC
CCTACCTGCGTCACATTTCGGCGAATCTGCCGAAGAAGTTGAAGGAGATG
GGTCTGGAGCCTGTTCCGATGACAGTCTTCGCGAAGGGTGCGTGGTTTGG
TCTTGAGGATCTCTGCGAGTCGGGCTACAATGTTGTTGGCTTGGACTGGC
TGCACGACCCCGCTGAGGCTAGGCGGATTGCCAATGGTCGTGTGACGATC
CAGGGTAATGCTGACCCTGGTGTTCTCTATGGAGGACGCGAGGCTATCAC
GGAGGCTGTGGAGACTATGGTTCGGGGATTCGAGAAGGGCAAGCAAGGCT
GGATTGCCAACTTGGGTCACGGTGTGACTCCTTTCGTCAACCCGGATGAT
CTCAAGTTCTTCTTCGAAGAGATCCACCGTCTGACGGTCTAAATGCAGCA
TCAATTCGAGCCATTGAAGAACGACCTCTTGCTGAGGGCTGCTAGGGGCG
AGAAAGTCCAGCGTCCTCCGATATGGGTTATGCGGCAAGCTGGCCGTTAT
CTCCCCGAATACCATGAAGCCAAAGCCGGCCGCGACTTTTTCGAATGCTG
CCGCGACCCCGAAGTCGCATCGACGTTGACGATCCAGCCCATCGACCGCT
ACGCCGGACTCATCGATGCTGCGATCATCTTCTCCGATATTCTGGTCATT
CCCCAGGCCATGGGAATGCAGGTTGAGATGGTCGACAAGAAGGGACCCCA
CTTCCCCGAGCCGCTCCAGTCGCCCGATGATGGACAGTACGAGAAAGTGA
TGCAGAAGGATGTGGATGTCAAGTCGGAGCTCGACTACGTCTACAAGGCC
ATTACCCTCACCCGCCACAAGCTGCAGGGTCGTGTGCCGTTGATCGGCTT
TTGCGGTGCCCCGTGGACTCTGCTGTGCTACATGGTAGAGGGAGGCGGCA
CGAAACTGTTCGTCCAGTCGAAGAAGTGGATCTACAAGTACCCCAAGGAG
TCGCAGGCTCTCCTGCAGAAGATCGCCGAGATCTGTGTTGAATACCTGGC
GCTTCAGGTTGCTGCTGGTGCTCAGCTGGTACAGGTCTTCGATTCCTGGG
CGGGTGAGCTGTCTCCGGCCGCTTTCAAGTCATTCTCTCTTCCCTACCTG
CGTCACATTTCGGCGAATCTGCCGAAGAAGTTGAAGGAGATGGGTCTGGA
GCCTGTTCCGATGACAGTCTTCGCGAAGGGTGCGTGGTTTGGTCTTGAGG
ATCTCTGCGAGTCGGGCTACAATGTTGTTGGCTTGGACTGGCTGCACGAC
CCCGCTGAGGCTAGGCGGATTGCCAATGGTCGTGTGACGATCCAGGGTAA
TGCTGACCCTGGTGTTCTCTATGGAGGACGCGAGGCTATCACGGAGGCTG
TGGAGACTATGGTTCGGGGATTCGAGAAGGGCAAGCAAGGCTGGATTGCC
AACTTGGGTCACGGTGTGACTCCTTTCGTCAACCCGGATGATCTCAAGTT
CTTCTTCGAAGAGATCCACCGTCTGACGGTCTAAATGCAGCATCAATTCG
AGCCATTGAAGAACGACCTCTTGCTGAGGGCTGCTAGGGGCGAGAAAGTC
CAGCGTCCTCCGATATGGGTTATGCGGCAAGCTGGCCGTTATCTCCCCGA
ATACCATGAAGCCAAAGCCGGCCGCGACTTTTTCGAATGCTGCCGCGACC
CCGAAGTCGCATCGACGTTGACGATCCAGCCCATCGACCGCTACGCCGGA
CTCATCGATGCTGCGATCATCTTCTCCGATATTCTGGTCATTCCCCAGGC
CATGGGAATGCAGGTTGAGATGGTCGACAAGAAGGGACCCCACTTCCCCG
AGCCGCTCCAGTCGCCCGATGATGGACAGTACGAGAAAGTGATGCAGAAG
GATGTGGATGTCAAGTCGGAGCTCGACTACGTCTACAAGGCCATTACCCT
CACCCGCCACAAGCTGCAGGGTCGTGTGCCGTTGATCGGCTTTTGCGGTG
CCCCGTGGACTCTGCTGTGCTACATGGTAGAGGGAGGCGGCACGAAACTG
TTCGTCCAGTCGAAGAAGTGGATCTACAAGTACCCCAAGGAGTCGCAGGC
TCTCCTGCAGAAGATCGCCGAGATCTGTGTTGAATACCTGGCGCTTCAGG
TTGCTGCTGGTGCTCAGCTGGTACAGGTCTTCGATTCCTGGGCGGGTGAG
CTGTCTCCGGCCGCTTTCAAGTCATTCTCTCTTCCCTACCTGCGTCACAT
TTCGGCGAATCTGCCGAAGAAGTTGAAGGAGATGGGTCTGGAGCCTGTTC
CGATGACAGTCTTCGCGAAGGGTGCGTGGTTTGGTCTTGAGGATCTCTGC
GAGTCGGGCTACAATGTTGTTGGCTTGGACTGGCTGCACGACCCCGCTGA
GGCTAGGCGGATTGCCAATGGTCGTGTGACGATCCAGGGTAATGCTGACC
CTGGTGTTCTCTATGGAGGACGCGAGGCTATCACGGAGGCTGTGGAGACT
ATGGTTCGGGGATTCGAGAAGGGCAAGCAAGGCTGGATTGCCAACTTGGG
TCACGGTGTGACTCCTTTCGTCAACCCGGATGATCTCAAGTTCTTCTTCG
AAGAGATCCACCGTCTGACGGTCTAAATGCAGCATCAATTCGAGCCATTG
AAGAACGACCTCTTGCTGAGGGCTGCTAGGGGCGAGAAAGTCCAGCGTCC
TCCGATATGGGTTATGCGGCAAGCTGGCCGTTATCTCCCCGAATACCATG
AAGCCAAAGCCGGCCGCGACTTTTTCGAATGCTGCCGCGACCCCGAAGTC
GCATCGACGTTGACGATCCAGCCCATCGACCGCTACGCCGGACTCATCGA
TGCTGCGATCATCTTCTCCGATATTCTGGTCATTCCCCAGGCCATGGGAA
TGCAGGTTGAGATGGTCGACAAGAAGGGACCCCACTTCCCCGAGCCGCTC
CAGTCGCCCGATGATGGACAGTACGAGAAAGTGATGCAGAAGGATGTGGA
TGTCAAGTCGGAGCTCGACTACGTCTACAAGGCCATTACCCTCACCCGCC
ACAAGCTGCAGGGTCGTGTGCCGTTGATCGGCTTTTGCGGTGCCCCGTGG
ACTCTGCTGTGCTACATGGTAGAGGGAGGCGGCACGAAACTGTTCGTCCA
GTCGAAGAAGTGGATCTACAAGTACCCCAAGGAGTCGCAGGCTCTCCTGC
AGAAGATCGCCGAGATCTGTGTTGAATACCTGGCGCTTCAGGTTGCTGCT
GGTGCTCAGCTGGTACAGGTCTTCGATTCCTGGGCGGGTGAGCTGTCTCC
GGCCGCTTTCAAGTCATTCTCTCTTCCCTACCTGCGTCACATTTCGGCGA
ATCTGCCGAAGAAGTTGAAGGAGATGGGTCTGGAGCCTGTTCCGATGACA
GTCTTCGCGAAGGGTGCGTGGTTTGGTCTTGAGGATCTCTGCGAGTCGGG
CTACAATGTTGTTGGCTTGGACTGGCTGCACGACCCCGCTGAGGCTAGGC
GGATTGCCAATGGTCGTGTGACGATCCAGGGTAATGCTGACCCTGGTGTT
CTCTATGGAGGACGCGAGGCTATCACGGAGGCTGTGGAGACTATGGTTCG
GGGATTCGAGAAGGGCAAGCAAGGCTGGATTGCCAACTTGGGTCACGGTG
TGACTCCTTTCGTCAACCCGGATGATCTCAAGTTCTTCTTCGAAGAGATC
CACCGTCTGACGGTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006779 | porphyrin-containing compound biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004853 | uroporphyrinogen decarboxylase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262JZK |
| DBxref | InterPro:IPR000257 |
| DBxref | InterPro:IPR006361 |
| DBxref | InterPro:IPR038071 |
| DBxref | PFAM:PF01208 |
| Product | Uroporphyrinogen decarboxylase in heme biosynthesis |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:997368..998661 + |
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