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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1030556..1031931+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000362-T1 ID=CBS51388_000362-T1|Name=CBS51388_000362-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1376bp|location=Sequence derived from alignment at An01:1030556..1031931+ (Aspergillus niger CBS 513.88)
ATGGGAACCAATGCTGATTACGACGAGAAGGCTGTTGCGGGATCCCTCGC
TGCAAACAACAATGGCGATGTCCATGAGCTTCCTACCCCGTCAGATGAGA
AACCCTTAGAAGAACCGATATTTGATACCGGCTTTAAGTCATGGATCCAA
GTGCTAGGTTCTTTCTTCCTTTTCTTCAACTCATGGTATGTGAGGCCCTA
TACTCAAGTATCATGTAGGGCATCAACTGACGAAGGATGACGGCCAGGGG
TGTCATTAACACCTGGGGTGCTTTCCAAACGTATTATGAACAGAACTTGT
TGTCGAACATGTCATCGTCCAACATCGCCTGGATTGGCTCACTCCAGGCT
TTCCTACTCATGCTTTTTGGTGTGGTAACAGGACCTCTCTTCGATGCAGG
CTACTTCCGTGCTCTGCTCACGTTTGGAAGCATTATGCTTCCCTTTGGGT
TGATGATGACCAGTCTTGCTACCAAGTTCTGGCAGCTGATCCTGGCCCAG
GGTATCTGTATTGGCCTGGCTGCCGGATGCCTGTTCGTTCCATCCGTCGC
CATTCTGCCCCAGTACTTCAAGAAGAGACGCGGCCTGGCCAATGGTCTTG
CCGCTTCGGGCAGCAGTATCGGAGGTGTGATCTACCCGATCATGTTTGAC
CAGTTGCAGCACAAGGTGGGCTTTCCCTGGGCGACTCGAGCTATTGGCTT
CCTCTGTTTCGGGACCTGTTGCATTTCATACAGCATCATGCGTATGCGCT
TCCAGCCGACAGAGAAGCGCAAGCTGGTCCAGTTGGCTGCCTTCAAGGAG
CCGCATTTCGTGATGTTCTGCATTGGCATGTTCTTGGGTTTCCTTGGATT
CTACAACTTCCTTTTCTACATCCAATCCTACGCCATCGATACCGGAATTG
TCGGTTCCACCCTCGGATTCTACCTGCTGTCCATGTTGAATGCGGGGTCC
ACCGTTGGACGTATCTGTCCGAATTTCATTGCCGACCACACGGGTCCCTT
GAACGTCCTCACTCCTGCAGCCACCGCTACCGCCATCCTCGCCTTTGCTT
GGATCGGAGTTCACAATGCTCCGGGCATCATCGTTCTTTCCGTGCTGTAT
GGTCTCTGCTCCGGCGGTTTCGTGTCACTTCCGCCGGTCGTGATGGTGAC
TTTGACCAAGGACATACGGGACCTGGGAACTCGTCTTGGCATGGTGTTCG
CAATCACCTCTGTCGGATTGCTGATCGGTACACCTATCGGCGGAGCCATT
CTGAGCAACTCGGGCAGCTACCTTGGAGTGCAGCTCTTCACAGCCTGCTG
TCTCATTACGTCTGCCTCCGTCTTTGCCGCGCTGAGATTCTCTCGCTCGG
GTATGAGACTTGCCGCGCGTGTGTGA back to topCoding sequence (CDS) from alignment at An01:1030556..1031931+ >CBS51388_000362-T1 ID=CBS51388_000362-T1|Name=CBS51388_000362-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2628bp|location=Sequence derived from alignment at An01:1030556..1031931+ (Aspergillus niger CBS 513.88)
ATGGGAACCAATGCTGATTACGACGAGAAGGCTGTTGCGGGATCCCTCGC
TGCAAACAACAATGGCGATGTCCATGAGCTTCCTACCCCGTCAGATGAGA
AACCCTTAGAAGAACCGATATTTGATACCGGCTTTAAGTCATGGATCCAA
GTGCTAGGTTCTTTCTTCCTTTTCTTCAACTCATGGGGTGTCATTAACAC
CTGGGGTGCTTTCCAAACGTATTATGAACAGAACTTGTTGTCGAACATGT
CATCGTCCAACATCGCCTGGATTGGCTCACTCCAGGCTTTCCTACTCATG
CTTTTTGGTGTGGTAACAGGACCTCTCTTCGATGCAGGCTACTTCCGTGC
TCTGCTCACGTTTGGAAGCATTATGCTTCCCTTTGGGTTGATGATGACCA
GTCTTGCTACCAAGTTCTGGCAGCTGATCCTGGCCCAGGGTATCTGTATT
GGCCTGGCTGCCGGATGCCTGTTCGTTCCATCCGTCGCCATTCTGCCCCA
GTACTTCAAGAAGAGACGCGGCCTGGCCAATGGTCTTGCCGCTTCGGGCA
GCAGTATCGGAGGTGTGATCTACCCGATCATGTTTGACCAGTTGCAGCAC
AAGGTGGGCTTTCCCTGGGCGACTCGAGCTATTGGCTTCCTCTGTTTCGG
GACCTGTTGCATTTCATACAGCATCATGCGTATGCGCTTCCAGCCGACAG
AGAAGCGCAAGCTGGTCCAGTTGGCTGCCTTCAAGGAGCCGCATTTCGTG
ATGTTCTGCATTGGCATGTTCTTGGGTTTCCTTGGATTCTACAACTTCCT
TTTCTACATCCAATCCTACGCCATCGATACCGGAATTGTCGGTTCCACCC
TCGGATTCTACCTGCTGTCCATGTTGAATGCGGGGTCCACCGTTGGACGT
ATCTGTCCGAATTTCATTGCCGACCACACGGGTCCCTTGAACGTCCTCAC
TCCTGCAGCCACCGCTACCGCCATCCTCGCCTTTGCTTGGATCGGAGTTC
ACAATGCTCCGGGCATCATCGTTCTTTCCGTGCTGTATGGTCTCTGCTCC
GGCGGTTTCGTGTCACTTCCGCCGGTCGTGATGGTGACTTTGACCAAGGA
CATACGGGACCTGGGAACTCGTCTTGGCATGGTGTTCGCAATCACCTCTG
TCGGATTGCTGATCGGTACACCTATCGGCGGAGCCATTCTGAGCAACTCG
GGCAGCTACCTTGGAGTGCAGCTCTTCACAGCCTGCTGTCTCATTACGTC
TGCCTCCGTCTTTGCCGCGCTGAGATTCTCTCGCTCGGGTATGAGACTTG
CCGCGCGTGTGTGAATGGGAACCAATGCTGATTACGACGAGAAGGCTGTT
GCGGGATCCCTCGCTGCAAACAACAATGGCGATGTCCATGAGCTTCCTAC
CCCGTCAGATGAGAAACCCTTAGAAGAACCGATATTTGATACCGGCTTTA
AGTCATGGATCCAAGTGCTAGGTTCTTTCTTCCTTTTCTTCAACTCATGG
GGTGTCATTAACACCTGGGGTGCTTTCCAAACGTATTATGAACAGAACTT
GTTGTCGAACATGTCATCGTCCAACATCGCCTGGATTGGCTCACTCCAGG
CTTTCCTACTCATGCTTTTTGGTGTGGTAACAGGACCTCTCTTCGATGCA
GGCTACTTCCGTGCTCTGCTCACGTTTGGAAGCATTATGCTTCCCTTTGG
GTTGATGATGACCAGTCTTGCTACCAAGTTCTGGCAGCTGATCCTGGCCC
AGGGTATCTGTATTGGCCTGGCTGCCGGATGCCTGTTCGTTCCATCCGTC
GCCATTCTGCCCCAGTACTTCAAGAAGAGACGCGGCCTGGCCAATGGTCT
TGCCGCTTCGGGCAGCAGTATCGGAGGTGTGATCTACCCGATCATGTTTG
ACCAGTTGCAGCACAAGGTGGGCTTTCCCTGGGCGACTCGAGCTATTGGC
TTCCTCTGTTTCGGGACCTGTTGCATTTCATACAGCATCATGCGTATGCG
CTTCCAGCCGACAGAGAAGCGCAAGCTGGTCCAGTTGGCTGCCTTCAAGG
AGCCGCATTTCGTGATGTTCTGCATTGGCATGTTCTTGGGTTTCCTTGGA
TTCTACAACTTCCTTTTCTACATCCAATCCTACGCCATCGATACCGGAAT
TGTCGGTTCCACCCTCGGATTCTACCTGCTGTCCATGTTGAATGCGGGGT
CCACCGTTGGACGTATCTGTCCGAATTTCATTGCCGACCACACGGGTCCC
TTGAACGTCCTCACTCCTGCAGCCACCGCTACCGCCATCCTCGCCTTTGC
TTGGATCGGAGTTCACAATGCTCCGGGCATCATCGTTCTTTCCGTGCTGT
ATGGTCTCTGCTCCGGCGGTTTCGTGTCACTTCCGCCGGTCGTGATGGTG
ACTTTGACCAAGGACATACGGGACCTGGGAACTCGTCTTGGCATGGTGTT
CGCAATCACCTCTGTCGGATTGCTGATCGGTACACCTATCGGCGGAGCCA
TTCTGAGCAACTCGGGCAGCTACCTTGGAGTGCAGCTCTTCACAGCCTGC
TGTCTCATTACGTCTGCCTCCGTCTTTGCCGCGCTGAGATTCTCTCGCTC
GGGTATGAGACTTGCCGCGCGTGTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1030556..1031931 + |
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