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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1166572..1168613- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000393-T1 ID=CBS51388_000393-T1|Name=CBS51388_000393-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2042bp|location=Sequence derived from alignment at An01:1166572..1168613- (Aspergillus niger CBS 513.88)
ATGCTGTACGCCGAAGACAACAAACTCATCTTCCGGTTCGACGACCATCT
CCTCTGGATACAGCCATGGGGCGAAAATGCACTCCGAGTGAGAGCTACCA
AGCTGGCTTCCATGCCCACCGAAGACTGGGCCTTATCCTCCAAGGTCACG
TCAATCGAACCTACCATCAGCATTGAGGAGCACAAAGACTCCAGCATTAC
CAACGGCAAGATCAAAGCCACCGTATCCCAGCGCGGCAAGATCACCATCT
ACAATCAAAAGGGAGAGAAGCTGCTCGAAGAATACGCTCGCAATCGTCGC
GATCTCAAGGACCCCAAATGCAGCGCACTAGAGGTCGAAGCTCGCGAGCT
GCGACCAATCCTAGGAGGCGACTTCCACCTAACCATGCGATTTGAGTCGC
TGGACCCTAAAGAGAAGATCTACGGAATGGGCCAGTATCAACAGCCGTTC
CTCAACCTCAAGGGTGTAGACATCGAGCTAGCGCATCGGAACTCCCAAGC
CAGCGTCCCCTTTGCGCTCTCCTCCCTTGGTTACGGGTTCCTGTGGAACA
ACCCGGCTATCGGACGAGCTGTGTTGGGAACGAATACCATGAGCTTTGAG
GCCTATTCTACCAAGGTGCTCGACTACTGGGTCGTTGCAGGAGACAGCCC
GGCTGAGATCGAGGAAGCCTATAGCAAAGTCACTGGCTATGTGCCAATGA
TGCCCGAGTACGGGCTTGGGTTCTGGCAATGCAAGCTGCGATACTGGAAC
CAGGAGCAGCTTCTTGACGTGGCACGGGAATACAAGCGACGAAACATACC
ACTGGATCTCATCGTCGTTGACTTCTTTCACTGGAAGCATCAAGGAGAAT
GGAGCTTCGATCCTGAATTCTGGCCGGATCCCGGTAAGTTCTCCACATAC
ATCTAGATATATAAAGAACCCTTATTTCAACAACTAACACAACCCACCAC
CACGCAGACGCCATGATCAAAGAACTCCAATCCCTAAACGTCGAATTAAT
GGTCTCCGTCTGGCCAACCGTCGAAAACGCATCGACCAACTACCCCGAAA
TGCTCGAAAAGGGCCTCCTAATTCGACACGACCGGGGGCTCCGCGTGTCC
ATGCAATGCAACGGCGACATCACCCACTTCGACGCTACGAACCCATCCGC
GCGTGCCTACGTCTGGAGCAAAGCGAAACAAAACTACTACGACAAAGGCA
TCAAAGTATTCTGGCTCGACGAAGCCGAACCCGAGTACTCCGTCTACGAC
TTCGACCTCTACCGGTACCACGCCGGCAGCAACCTGCAAATCGGAAACAT
CTTCCCGAAAGAATACGCGCGGGGGTTCTACGAAGGCATGGAATCCGCAG
GGCAAACCAACATCGTCAATCTCCTACGGTGCGCCTGGGCCGGGAGCCAG
AAATACGGCGCCCTAGTCTGGAGCGGCGACATAGCATCCTCGTGGTCGTC
GTTCCGCAATCAACTAGCGGCCGGGCTAAACATGGGTCTGGCAGGGATCC
CCTGGTGGACGACAGACATCGGGGGCTTCCATGGAGGCGATCCGTCGGAC
CCAGCATTCCGGGAGCTGTTCACGCGGTGGTTCCAATGGGGGGCATTCTG
TCCTGTGATGCGCTTGCATGGCGACCGGGAACCCAAGCCCGAGAACCGGC
CTACGGATTCGGGCTCCGATAATGAAATCTGGTCGTATGGTGAGGAGGTC
TACGAGATCTGTAAAAAGTACATTGGGATTCGCGAGGAGTTGCGCGATTA
CACGAGGGGGTTGATGAAGGAGGCGCATGAGAAGGGAACGCCCGTCATGC
GAACTCTGTTTTATGAGTTTCCCGCTGACAAAAAGGCGTGGGACGTCGAG
ACAGAACATCTCTTTGGCTCGAAGTATCTTGTTGTGCCGGTGTTCGAGGC
AGGAAAGAGGTCTGTTGAGGTGTATTTGCCGGCCGGGGCGTCGTGGAAGG
TTTGGGGTCAGGAAGATGTGATCCATGAGGGAGGGAAGGAGATTCAGGTG
GACTGTCCGATTGAGACGATGCCGGTATTTGTCAGGGTCTGA back to topCoding sequence (CDS) from alignment at An01:1166572..1168613- >CBS51388_000393-T1 ID=CBS51388_000393-T1|Name=CBS51388_000393-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3936bp|location=Sequence derived from alignment at An01:1166572..1168613- (Aspergillus niger CBS 513.88)
ACGCCATGATCAAAGAACTCCAATCCCTAAACGTCGAATTAATGGTCTCC
GTCTGGCCAACCGTCGAAAACGCATCGACCAACTACCCCGAAATGCTCGA
AAAGGGCCTCCTAATTCGACACGACCGGGGGCTCCGCGTGTCCATGCAAT
GCAACGGCGACATCACCCACTTCGACGCTACGAACCCATCCGCGCGTGCC
TACGTCTGGAGCAAAGCGAAACAAAACTACTACGACAAAGGCATCAAAGT
ATTCTGGCTCGACGAAGCCGAACCCGAGTACTCCGTCTACGACTTCGACC
TCTACCGGTACCACGCCGGCAGCAACCTGCAAATCGGAAACATCTTCCCG
AAAGAATACGCGCGGGGGTTCTACGAAGGCATGGAATCCGCAGGGCAAAC
CAACATCGTCAATCTCCTACGGTGCGCCTGGGCCGGGAGCCAGAAATACG
GCGCCCTAGTCTGGAGCGGCGACATAGCATCCTCGTGGTCGTCGTTCCGC
AATCAACTAGCGGCCGGGCTAAACATGGGTCTGGCAGGGATCCCCTGGTG
GACGACAGACATCGGGGGCTTCCATGGAGGCGATCCGTCGGACCCAGCAT
TCCGGGAGCTGTTCACGCGGTGGTTCCAATGGGGGGCATTCTGTCCTGTG
ATGCGCTTGCATGGCGACCGGGAACCCAAGCCCGAGAACCGGCCTACGGA
TTCGGGCTCCGATAATGAAATCTGGTCGTATGGTGAGGAGGTCTACGAGA
TCTGTAAAAAGTACATTGGGATTCGCGAGGAGTTGCGCGATTACACGAGG
GGGTTGATGAAGGAGGCGCATGAGAAGGGAACGCCCGTCATGCGAACTCT
GTTTTATGAGTTTCCCGCTGACAAAAAGGCGTGGGACGTCGAGACAGAAC
ATCTCTTTGGCTCGAAGTATCTTGTTGTGCCGGTGTTCGAGGCAGGAAAG
AGGTCTGTTGAGGTGTATTTGCCGGCCGGGGCGTCGTGGAAGGTTTGGGG
TCAGGAAGATGTGATCCATGAGGGAGGGAAGGAGATTCAGGTGGACTGTC
CGATTGAGACGATGCCGGTATTTGTCAGGGTCTGAATGCTGTACGCCGAA
GACAACAAACTCATCTTCCGGTTCGACGACCATCTCCTCTGGATACAGCC
ATGGGGCGAAAATGCACTCCGAGTGAGAGCTACCAAGCTGGCTTCCATGC
CCACCGAAGACTGGGCCTTATCCTCCAAGGTCACGTCAATCGAACCTACC
ATCAGCATTGAGGAGCACAAAGACTCCAGCATTACCAACGGCAAGATCAA
AGCCACCGTATCCCAGCGCGGCAAGATCACCATCTACAATCAAAAGGGAG
AGAAGCTGCTCGAAGAATACGCTCGCAATCGTCGCGATCTCAAGGACCCC
AAATGCAGCGCACTAGAGGTCGAAGCTCGCGAGCTGCGACCAATCCTAGG
AGGCGACTTCCACCTAACCATGCGATTTGAGTCGCTGGACCCTAAAGAGA
AGATCTACGGAATGGGCCAGTATCAACAGCCGTTCCTCAACCTCAAGGGT
GTAGACATCGAGCTAGCGCATCGGAACTCCCAAGCCAGCGTCCCCTTTGC
GCTCTCCTCCCTTGGTTACGGGTTCCTGTGGAACAACCCGGCTATCGGAC
GAGCTGTGTTGGGAACGAATACCATGAGCTTTGAGGCCTATTCTACCAAG
GTGCTCGACTACTGGGTCGTTGCAGGAGACAGCCCGGCTGAGATCGAGGA
AGCCTATAGCAAAGTCACTGGCTATGTGCCAATGATGCCCGAGTACGGGC
TTGGGTTCTGGCAATGCAAGCTGCGATACTGGAACCAGGAGCAGCTTCTT
GACGTGGCACGGGAATACAAGCGACGAAACATACCACTGGATCTCATCGT
CGTTGACTTCTTTCACTGGAAGCATCAAGGAGAATGGAGCTTCGATCCTG
AATTCTGGCCGGATCCCGACGCCATGATCAAAGAACTCCAATCCCTAAAC
GTCGAATTAATGGTCTCCGTCTGGCCAACCGTCGAAAACGCATCGACCAA
CTACCCCGAAATGCTCGAAAAGGGCCTCCTAATTCGACACGACCGGGGGC
TCCGCGTGTCCATGCAATGCAACGGCGACATCACCCACTTCGACGCTACG
AACCCATCCGCGCGTGCCTACGTCTGGAGCAAAGCGAAACAAAACTACTA
CGACAAAGGCATCAAAGTATTCTGGCTCGACGAAGCCGAACCCGAGTACT
CCGTCTACGACTTCGACCTCTACCGGTACCACGCCGGCAGCAACCTGCAA
ATCGGAAACATCTTCCCGAAAGAATACGCGCGGGGGTTCTACGAAGGCAT
GGAATCCGCAGGGCAAACCAACATCGTCAATCTCCTACGGTGCGCCTGGG
CCGGGAGCCAGAAATACGGCGCCCTAGTCTGGAGCGGCGACATAGCATCC
TCGTGGTCGTCGTTCCGCAATCAACTAGCGGCCGGGCTAAACATGGGTCT
GGCAGGGATCCCCTGGTGGACGACAGACATCGGGGGCTTCCATGGAGGCG
ATCCGTCGGACCCAGCATTCCGGGAGCTGTTCACGCGGTGGTTCCAATGG
GGGGCATTCTGTCCTGTGATGCGCTTGCATGGCGACCGGGAACCCAAGCC
CGAGAACCGGCCTACGGATTCGGGCTCCGATAATGAAATCTGGTCGTATG
GTGAGGAGGTCTACGAGATCTGTAAAAAGTACATTGGGATTCGCGAGGAG
TTGCGCGATTACACGAGGGGGTTGATGAAGGAGGCGCATGAGAAGGGAAC
GCCCGTCATGCGAACTCTGTTTTATGAGTTTCCCGCTGACAAAAAGGCGT
GGGACGTCGAGACAGAACATCTCTTTGGCTCGAAGTATCTTGTTGTGCCG
GTGTTCGAGGCAGGAAAGAGGTCTGTTGAGGTGTATTTGCCGGCCGGGGC
GTCGTGGAAGGTTTGGGGTCAGGAAGATGTGATCCATGAGGGAGGGAAGG
AGATTCAGGTGGACTGTCCGATTGAGACGATGCCGGTATTTGTCAGGGTC
TGAATGCTGTACGCCGAAGACAACAAACTCATCTTCCGGTTCGACGACCA
TCTCCTCTGGATACAGCCATGGGGCGAAAATGCACTCCGAGTGAGAGCTA
CCAAGCTGGCTTCCATGCCCACCGAAGACTGGGCCTTATCCTCCAAGGTC
ACGTCAATCGAACCTACCATCAGCATTGAGGAGCACAAAGACTCCAGCAT
TACCAACGGCAAGATCAAAGCCACCGTATCCCAGCGCGGCAAGATCACCA
TCTACAATCAAAAGGGAGAGAAGCTGCTCGAAGAATACGCTCGCAATCGT
CGCGATCTCAAGGACCCCAAATGCAGCGCACTAGAGGTCGAAGCTCGCGA
GCTGCGACCAATCCTAGGAGGCGACTTCCACCTAACCATGCGATTTGAGT
CGCTGGACCCTAAAGAGAAGATCTACGGAATGGGCCAGTATCAACAGCCG
TTCCTCAACCTCAAGGGTGTAGACATCGAGCTAGCGCATCGGAACTCCCA
AGCCAGCGTCCCCTTTGCGCTCTCCTCCCTTGGTTACGGGTTCCTGTGGA
ACAACCCGGCTATCGGACGAGCTGTGTTGGGAACGAATACCATGAGCTTT
GAGGCCTATTCTACCAAGGTGCTCGACTACTGGGTCGTTGCAGGAGACAG
CCCGGCTGAGATCGAGGAAGCCTATAGCAAAGTCACTGGCTATGTGCCAA
TGATGCCCGAGTACGGGCTTGGGTTCTGGCAATGCAAGCTGCGATACTGG
AACCAGGAGCAGCTTCTTGACGTGGCACGGGAATACAAGCGACGAAACAT
ACCACTGGATCTCATCGTCGTTGACTTCTTTCACTGGAAGCATCAAGGAG
AATGGAGCTTCGATCCTGAATTCTGGCCGGATCCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030246 | carbohydrate binding |
| GO:0003824 | catalytic activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH31 |
| DBxref | InterPro:IPR011013 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR013780 |
| DBxref | InterPro:IPR000322 |
| DBxref | PFAM:PF01055 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1166572..1168613 - |
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