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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1172737..1174253+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000395-T1 ID=CBS51388_000395-T1|Name=CBS51388_000395-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1517bp|location=Sequence derived from alignment at An01:1172737..1174253+ (Aspergillus niger CBS 513.88)
ATGCCACCCCCATCGCAAAATATCCCACTAGCCAGCACCCTCGTGGCCCG
TTTTCTACGGACAAACAATTACACGCAAACACTCAAAGCTTTCCTGCAAG
AAGCGGGGCTCCCGTCCGACGCGGGAGAACAGAGCGGCAAAGACGATGCC
ACCAACTGGACCATCGAGAATCTGATCGAGGAGAAGAAAGCCTATGACCA
AAGTAAGAACTTCGAGAGATATGGTGACAATGACAAGGACAAAGATGTCT
GGACCGTTCCAGGTCTGTGTAACACCTTCATGCCCCGCTAGAAGCTAGAA
ACTAACCTGCTCTTACAGCACCCACCAAGCCCAACATCATCCAAACGCCA
AGCAGTTCAAACCTACTGGCATGCTCCGTTGGGCAATGGCAAAGGCCAGA
TGCACAAGCAGAGCCATATCTGATCGCCACCGGCGCAGACAAGCACCTCC
ATCTCTTCCAAACATCTCCTGGCCATGACCTCGTCCAGTCATTCACGGGC
ACATCAGAGGCCCCAATTCTATCGTATATCCCGGTCCAAGATGGGAAATA
CATCCTCATGACCAATATGTCAGGCCAGCTTCTTCTGCAAAAAGGCGCAG
AAATCATAGACCGCCGCAAGGACCACGCCAAATACGCGGTCAAAGTCATC
GCCTACGAACAGAAGAACAACAACGACACAGCAGACACCTTTTCCACCAC
TACGACAATCTGGATTGCAACAGCAGGCTGGGACTCCAAGATCTTCCTCT
ACCGCATGCAGATTAACGATGAAGCCCCTACGCAAATCGGTGACCCCATT
GCCTCCATCCCATTACTCTCCAATCCCGAATCCATCCTCTTCACCACCCA
CATCGACAACCCTCAGGACCTAATCCTCCTCGTCTCCCGCCGCGACTCAA
GCAACCTATACTACTACCATGTCAAACCGTCAGCGGTCTCAACCACCGGA
TACGAATGCCCTCTCATCGGTAAACAAAACCTCGCCCCGCACTCCAACGC
CTGGGTCGCCTTCTCCCCCTCCTGTCTGGCCCTCAGCCCTCATGACCCGG
GACTCATAGCCATCGCAACATCAACTCTTCCGCATATGAAAGTTATGATT
GTGCGGTTGCTCTTCCCCTCAGCAGAGAGCTTGGAGTCAGGCTCGGCGGA
GCAGGAACAGGAGCCAGCAACGCAAGCGGCGCAGGCTTTCGCTGCCCTGT
CGCTGCAGAATCGCGAGGACGCCGCGATTCTGATCCAGGCGAATACGTTT
GCGCCGCAGACGGCGTACTCGACGCCACAGGTTGTGTGGAGACCGGATGG
GTCGGGGGTGTGGGTTAATGGGGATGATGGGGTTGTGAGGGGGTTGGAGG
TGAAGACGGGGAAGGTTGTGACGTTGTTGAAGGATGGGCATGAGGTTGGG
TGTAAGATTAGGACGCTTTGGGCGGGGTGGGTTGATGGGGAGAATGGGGG
TGAGAGGGAGGAGTGGTTGGTTAGTGGGGGGTTTGATAAGAGGTTGGTCG
TTTGGAAGGTTGAGTGA back to topCoding sequence (CDS) from alignment at An01:1172737..1174253+ >CBS51388_000395-T1 ID=CBS51388_000395-T1|Name=CBS51388_000395-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2922bp|location=Sequence derived from alignment at An01:1172737..1174253+ (Aspergillus niger CBS 513.88)
ATGCCACCCCCATCGCAAAATATCCCACTAGCCAGCACCCTCGTGGCCCG
TTTTCTACGGACAAACAATTACACGCAAACACTCAAAGCTTTCCTGCAAG
AAGCGGGGCTCCCGTCCGACGCGGGAGAACAGAGCGGCAAAGACGATGCC
ACCAACTGGACCATCGAGAATCTGATCGAGGAGAAGAAAGCCTATGACCA
AAGTAAGAACTTCGAGAGATATGGTGACAATGACAAGGACAAAGATGTCT
GGACCGTTCCAGCACCCACCAAGCCCAACATCATCCAAACGCCAAGCAGT
TCAAACCTACTGGCATGCTCCGTTGGGCAATGGCAAAGGCCAGATGCACA
AGCAGAGCCATATCTGATCGCCACCGGCGCAGACAAGCACCTCCATCTCT
TCCAAACATCTCCTGGCCATGACCTCGTCCAGTCATTCACGGGCACATCA
GAGGCCCCAATTCTATCGTATATCCCGGTCCAAGATGGGAAATACATCCT
CATGACCAATATGTCAGGCCAGCTTCTTCTGCAAAAAGGCGCAGAAATCA
TAGACCGCCGCAAGGACCACGCCAAATACGCGGTCAAAGTCATCGCCTAC
GAACAGAAGAACAACAACGACACAGCAGACACCTTTTCCACCACTACGAC
AATCTGGATTGCAACAGCAGGCTGGGACTCCAAGATCTTCCTCTACCGCA
TGCAGATTAACGATGAAGCCCCTACGCAAATCGGTGACCCCATTGCCTCC
ATCCCATTACTCTCCAATCCCGAATCCATCCTCTTCACCACCCACATCGA
CAACCCTCAGGACCTAATCCTCCTCGTCTCCCGCCGCGACTCAAGCAACC
TATACTACTACCATGTCAAACCGTCAGCGGTCTCAACCACCGGATACGAA
TGCCCTCTCATCGGTAAACAAAACCTCGCCCCGCACTCCAACGCCTGGGT
CGCCTTCTCCCCCTCCTGTCTGGCCCTCAGCCCTCATGACCCGGGACTCA
TAGCCATCGCAACATCAACTCTTCCGCATATGAAAGTTATGATTGTGCGG
TTGCTCTTCCCCTCAGCAGAGAGCTTGGAGTCAGGCTCGGCGGAGCAGGA
ACAGGAGCCAGCAACGCAAGCGGCGCAGGCTTTCGCTGCCCTGTCGCTGC
AGAATCGCGAGGACGCCGCGATTCTGATCCAGGCGAATACGTTTGCGCCG
CAGACGGCGTACTCGACGCCACAGGTTGTGTGGAGACCGGATGGGTCGGG
GGTGTGGGTTAATGGGGATGATGGGGTTGTGAGGGGGTTGGAGGTGAAGA
CGGGGAAGGTTGTGACGTTGTTGAAGGATGGGCATGAGGTTGGGTGTAAG
ATTAGGACGCTTTGGGCGGGGTGGGTTGATGGGGAGAATGGGGGTGAGAG
GGAGGAGTGGTTGGTTAGTGGGGGGTTTGATAAGAGGTTGGTCGTTTGGA
AGGTTGAGTGAATGCCACCCCCATCGCAAAATATCCCACTAGCCAGCACC
CTCGTGGCCCGTTTTCTACGGACAAACAATTACACGCAAACACTCAAAGC
TTTCCTGCAAGAAGCGGGGCTCCCGTCCGACGCGGGAGAACAGAGCGGCA
AAGACGATGCCACCAACTGGACCATCGAGAATCTGATCGAGGAGAAGAAA
GCCTATGACCAAAGTAAGAACTTCGAGAGATATGGTGACAATGACAAGGA
CAAAGATGTCTGGACCGTTCCAGCACCCACCAAGCCCAACATCATCCAAA
CGCCAAGCAGTTCAAACCTACTGGCATGCTCCGTTGGGCAATGGCAAAGG
CCAGATGCACAAGCAGAGCCATATCTGATCGCCACCGGCGCAGACAAGCA
CCTCCATCTCTTCCAAACATCTCCTGGCCATGACCTCGTCCAGTCATTCA
CGGGCACATCAGAGGCCCCAATTCTATCGTATATCCCGGTCCAAGATGGG
AAATACATCCTCATGACCAATATGTCAGGCCAGCTTCTTCTGCAAAAAGG
CGCAGAAATCATAGACCGCCGCAAGGACCACGCCAAATACGCGGTCAAAG
TCATCGCCTACGAACAGAAGAACAACAACGACACAGCAGACACCTTTTCC
ACCACTACGACAATCTGGATTGCAACAGCAGGCTGGGACTCCAAGATCTT
CCTCTACCGCATGCAGATTAACGATGAAGCCCCTACGCAAATCGGTGACC
CCATTGCCTCCATCCCATTACTCTCCAATCCCGAATCCATCCTCTTCACC
ACCCACATCGACAACCCTCAGGACCTAATCCTCCTCGTCTCCCGCCGCGA
CTCAAGCAACCTATACTACTACCATGTCAAACCGTCAGCGGTCTCAACCA
CCGGATACGAATGCCCTCTCATCGGTAAACAAAACCTCGCCCCGCACTCC
AACGCCTGGGTCGCCTTCTCCCCCTCCTGTCTGGCCCTCAGCCCTCATGA
CCCGGGACTCATAGCCATCGCAACATCAACTCTTCCGCATATGAAAGTTA
TGATTGTGCGGTTGCTCTTCCCCTCAGCAGAGAGCTTGGAGTCAGGCTCG
GCGGAGCAGGAACAGGAGCCAGCAACGCAAGCGGCGCAGGCTTTCGCTGC
CCTGTCGCTGCAGAATCGCGAGGACGCCGCGATTCTGATCCAGGCGAATA
CGTTTGCGCCGCAGACGGCGTACTCGACGCCACAGGTTGTGTGGAGACCG
GATGGGTCGGGGGTGTGGGTTAATGGGGATGATGGGGTTGTGAGGGGGTT
GGAGGTGAAGACGGGGAAGGTTGTGACGTTGTTGAAGGATGGGCATGAGG
TTGGGTGTAAGATTAGGACGCTTTGGGCGGGGTGGGTTGATGGGGAGAAT
GGGGGTGAGAGGGAGGAGTGGTTGGTTAGTGGGGGGTTTGATAAGAGGTT
GGTCGTTTGGAAGGTTGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR006594 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1172737..1174253 + |
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