|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1174834..1175516- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000396-T1 ID=CBS51388_000396-T1|Name=CBS51388_000396-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=683bp|location=Sequence derived from alignment at An01:1174834..1175516- (Aspergillus niger CBS 513.88)
ATGGCGAGTACGTGACACCCCTTTTGCTCCAAAATCCTCGAAACCCCGTT
ATTTTCGTTTTCCCGTCTCTCATGGGCGGGGAATGCGATTATCGACCATT
GCAAATCGAAGAGTTATGTATCGCTGACATGAATTCCCACAGAGTCCAAG
AACGCGTCTCAGCACCACAACAGCCAGAAGGCTCACCGTAACGGGTGCGT
ATTATAAGCCGATTATCCTCCTACCTCTTTATTTGTTCCAAGAATGCCAC
ACGAAACGCCAGAGGACGAATACTGCGATGTTGGATAGAGGACGATATCT
TCGACAGATTTGAGGCTCAGAGAACGGATAAGGAAGAAGAGGATACTCAA
TGAGGGAGGATATCGACCAATATCCAGCATTCAGCATATTCGTCCTCGGA
ATCAATACAACAACTACAACGAACGCGGGAGAGAGATCGGAACACTGACC
ATCGCCTTTTGAAATCAACAGTATCAAGAAGCCCAAGACCCACCGTTACC
CCTCCCTCAAGGGTGTCGACCCCAAGTTCCGCCGCAACCACAGACACGCC
CTTCACGGAACCGCTAAGGCTCTGGTACGTTTTGTGACCGATCCAACAAG
AAACTTGTTGGCCAAGCCAAAAGGAATCGACACTAACAACCCTACAGAAG
GAGCGCAAGGAGGGCAAGCGCGAGATCGCATAA back to topCoding sequence (CDS) from alignment at An01:1174834..1175516- >CBS51388_000396-T1 ID=CBS51388_000396-T1|Name=CBS51388_000396-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=792bp|location=Sequence derived from alignment at An01:1174834..1175516- (Aspergillus niger CBS 513.88)
AAGGAGCGCAAGGAGGGCAAGCGCGAGATCGCATAATATCAAGAAGCCCA
AGACCCACCGTTACCCCTCCCTCAAGGGTGTCGACCCCAAGTTCCGCCGC
AACCACAGACACGCCCTTCACGGAACCGCTAAGGCTCTGAGTCCAAGAAC
GCGTCTCAGCACCACAACAGCCAGAAGGCTCACCGTAACGGATGGCGAAA
GGAGCGCAAGGAGGGCAAGCGCGAGATCGCATAATATCAAGAAGCCCAAG
ACCCACCGTTACCCCTCCCTCAAGGGTGTCGACCCCAAGTTCCGCCGCAA
CCACAGACACGCCCTTCACGGAACCGCTAAGGCTCTGAGTCCAAGAACGC
GTCTCAGCACCACAACAGCCAGAAGGCTCACCGTAACGGATGGCGAAAGG
AGCGCAAGGAGGGCAAGCGCGAGATCGCATAATATCAAGAAGCCCAAGAC
CCACCGTTACCCCTCCCTCAAGGGTGTCGACCCCAAGTTCCGCCGCAACC
ACAGACACGCCCTTCACGGAACCGCTAAGGCTCTGAGTCCAAGAACGCGT
CTCAGCACCACAACAGCCAGAAGGCTCACCGTAACGGATGGCGAAAGGAG
CGCAAGGAGGGCAAGCGCGAGATCGCATAATATCAAGAAGCCCAAGACCC
ACCGTTACCCCTCCCTCAAGGGTGTCGACCCCAAGTTCCGCCGCAACCAC
AGACACGCCCTTCACGGAACCGCTAAGGCTCTGAGTCCAAGAACGCGTCT
CAGCACCACAACAGCCAGAAGGCTCACCGTAACGGATGGCGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002673 |
| DBxref | PFAM:PF01779 |
| Product | 60S ribosomal protein L29 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1174834..1175516 - |
|
