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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1244519..1247903+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000415-T1 ID=CBS51388_000415-T1|Name=CBS51388_000415-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3385bp|location=Sequence derived from alignment at An01:1244519..1247903+ (Aspergillus niger CBS 513.88)
ATGCCACCGGCAGCTTCGGACGATTTGTTTCGCCAGCAGAGCCGGTCCTT
AGGTGACACCAGCCCCTTTCCAGAAGATCCCAGTCGAGCCACTTTGGAGC
ATGATCTCGGTGGAAAGACCAAGAAAAAGGGGAAAACCGGAACCAAGGGG
AAGAATAAAGCAGCCAAAGCAATCCCGAAGTCTACACCTGACGACCTGTA
AGTCTGAGTCTCTCCACGTGTCTAGAAGGATCTTGAATCTAGGCGGACAG
TTGGCTGACTTGAGTTCACGCGTGGTATGCAGTCTAGAAGCAGAAGCACC
GTCACCGTCACCGCCTCTGCAGGCTGAACCATCGTCCTGCCCCAATCCAA
CACTGGAGCCGCCACCTAGCAACAATATCGTGTCACCGGTACTTGATGCC
CTTGGCACTCTGGGGGACTCTCCGGAGAATGACATTGCTTACCGCACCGG
TACTTGGGCCAAGTCCATCCCGTATGGCAAAAGTCCTCCGAATGATGCCG
TTGATGGCGAGTTCAACAGTGGGTCTCCCTTCGGTTTCCTCACCAGTCAA
GACAAAGGCGGATTCAGCCACCCCTCTTCGACGTCTCCCCCTCCGGGAGC
AAGGCCCTTGAGCTATGGGCGGGGTTACGCAACCAGCAGTGTGTCTAGAC
AGCACTCCGTGGACCGACAAAAGAGCAACTCCGTCAGTAGCCCATTTAAC
AACCAGGCACCCCTACCGCATCTGCCGCAGGCCCATTTCTATGGCGCGCC
AGATATCGATTTGCCTCTGTTCTCTGGCCAGAATAGGGCCGCAACCGACG
GTAGTTATTCATTCTGTGCGTTCGATACGATCATAAGCCCGCCATCCAAA
GCCTCCAGGATGGGAAGTAGCGTTCTCCTGGTCGGCACGGATGGCGGCTT
GGATATTCTTGCCATTGAAGATCGAAAAACGCGCCCTGTAGGGAAGTTGG
CAGGTCTCAATGGCCGCGTAATTGAAGCGAAGTTGCTGAGCAACACTTCA
ACTAATGACACGTCTATACATTCCCGACCTCATATCGCTGTCATCATTCA
CGGCCCCACTGCTCAACCAGATGATGAGGGCCATGCATCCTCCAATAGCT
CGGAAGCAAATGATATTCCCACTGGAAGACAGTCGGCCGCTGGAGGGCGT
CCGAAAGAAGAGACCAGGTTTTACCAGACACGGGTCGAGGTGTATTCTTT
AAGGACCGGCGAGCACATCACAACGCTTCTGTCCACGCCGCCCACTCCCT
GCTTTGGCAATATACCTGGTCTTCCTGCCCTGGCTCCTTCACCGGCCGGG
AATCTCAAGCTCTTTGTGAGCGGAAGCTACGTTGTCGTAGCATCCGGTTC
CAGTGGGGAAGTCTACATGTACAGCATGAGCAATTATCAGTTTCTAGGAA
AGGCATGGACCAGTATCAAGTCAAAGGAATCTCGGCGATACTCCACGTCC
TCCAGCTCGACTGACCCAGATGGATCTCAATCCGAATCTCCTCATGGATC
TCTCAACTCTGATAGTCCTATCGTGGCATTGAAGGGAAGATGGCTAGCAA
TTGTCCCACCATCCGCAACTTACAGGGCTACTCTCCGTGCTGCCGTGCCG
ACGTCCTTGTTGCAAGGGAAGGCGTTCGGGCTTGAGACTCGAAGTCCCCC
GTCGCGTCCGGCTATCACCTGCGCTACTGATGTCGGAGAGGGCGAAAGCT
TTTTCGGCAAGGTAGCCCGGGGCGTTACCCAGGAGCTCATGCGAGGTGCA
CGGTGGATGGGTGACCAAGGACTACAAGCCTGGAACAATTACTGGAATAA
GGAGCAAGCTCAAAGCATGCCAGCACGCCGCTCTCCTAATTTGACGGAGT
TTTCACCTCAGGGGTACAATCTCTTCCCTCCCACCCATGCCCAGGACACC
CAGTCTGTGTCCACTACCGAACCTGATTTGGTATCAATCTTCGATCTGCG
AAAGCTAGAGGAGGGCGAGGCCAAGAGTTCTTTGTTCAATCCAGTGGCCA
CTTTTCAGGTGCCGAATGGCTGCAGCTTCCTTTCATTTTCTCCCAACGGT
CTCATGTTATTTACTGCCAGTAAAAAGGGAGATGTCCAGTATGTTTGGGA
TGTTATGCAGGCTAAATACTGTCGAGCCGGGGCTTTCATGTCAGACGATC
CAGCATCTGTGCAGCCGAGCGTGCGGCAGATTGCCCGGTACCCGCGATTA
ACCACGTCCCATATAGTTGACGTGGTCTGGTGTCCGCCGTCTGGGGACAA
GCTCGCAGTGATTACGGGTAAACCGACGGTGCATGTTTTTGACTTGCCTC
GGAGCGCCTTTCAATGGCCTCCTTTTCGACGATCTCTACCAAAACCTGCG
AAACCGCCTACTGCTGATGCTCCGGCAGAAGAGCTTCCCGACCGGGGGCC
GGCTGCGAATCCATTGTCGGCAGCCTTCAAGATGGTCGGCGGTAAGACGC
AGCCCATTCTTGCCGCAGTCAGGGGGCGTACTCCCTCCACCGGGGCCGCT
TTCCCCTCCGTGGGTGGCTTTGCAATGCCTTCTGCAGCTGGAGTAAGAGG
GGGCAAGGCGGTTGCTGCTGGCCTTAGTAAATCAATGGGGGCCGCCGCCA
CCGGCACTGTCAAAACGGTCAACACCATCCGACATGGTGGTGAACATCGC
CTGCACCTATCCAATCTTTCTCGGGACCCCGTTGCGGCTCGTGTGACATG
GATCATCCATAAAGGAATGCCATTCTTGGGCCTGATAGATGGGGGTTACT
TCCGTCTGTACAGGATTAAACGCTCCACCTCACCCAGTAAGAGTAGGCAG
GTGCAATCGGTGATCGGAAACAAAGAACTTGAGTTCCGCTTGCCTCCCCA
TATGCAGACACCTTGCGGTCCCATGACCGTGGGTCCCGCCGCCACCACAG
AAACAACGGTCTCTGCAACATTGGCTCTGCCATCCGCGGCGCTACGACCG
CCGCCAGCGTCGAAGCTCAAATGCCAGCCTCTTTCGCAGGCGGAGATCGA
GACAAACACACCATATCAGCCTTTCCACACCGACCAGAGGGTAAACCTCT
TTGTGTACAGTGAGGCCGACGACTCCGTGGGTTCAGTCCCGACGGGTCAA
TGGACCTTCGGCGGCTCTCTAGCCACTACGAAGCTTCACGTACGACCGTT
CAGCGCCTCCAGCGAAGAAGACGATGACATGGTACATGAACAACACCACG
GGTTTGGAGCTGAAATGGAGAATCTAATCAGCCTGGGAAATAGTACGGGC
AATGTGGAAGAAGTGGTCATTACTACACGCAGGAAGAAGAAGCAGGCTTC
GGCCATGGCCCCGGGTGGCGGGGTCGATGACGGCTTCTTTGAAAATGACT
GCGAGGTCTTGGACTTCGCTCGGGACCGAGTCTAA back to topCoding sequence (CDS) from alignment at An01:1244519..1247903+ >CBS51388_000415-T1 ID=CBS51388_000415-T1|Name=CBS51388_000415-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6600bp|location=Sequence derived from alignment at An01:1244519..1247903+ (Aspergillus niger CBS 513.88)
ATGCCACCGGCAGCTTCGGACGATTTGTTTCGCCAGCAGAGCCGGTCCTT
AGGTGACACCAGCCCCTTTCCAGAAGATCCCAGTCGAGCCACTTTGGAGC
ATGATCTCGGTGGAAAGACCAAGAAAAAGGGGAAAACCGGAACCAAGGGG
AAGAATAAAGCAGCCAAAGCAATCCCGAAGTCTACACCTGACGACCTTCT
AGAAGCAGAAGCACCGTCACCGTCACCGCCTCTGCAGGCTGAACCATCGT
CCTGCCCCAATCCAACACTGGAGCCGCCACCTAGCAACAATATCGTGTCA
CCGGTACTTGATGCCCTTGGCACTCTGGGGGACTCTCCGGAGAATGACAT
TGCTTACCGCACCGGTACTTGGGCCAAGTCCATCCCGTATGGCAAAAGTC
CTCCGAATGATGCCGTTGATGGCGAGTTCAACAGTGGGTCTCCCTTCGGT
TTCCTCACCAGTCAAGACAAAGGCGGATTCAGCCACCCCTCTTCGACGTC
TCCCCCTCCGGGAGCAAGGCCCTTGAGCTATGGGCGGGGTTACGCAACCA
GCAGTGTGTCTAGACAGCACTCCGTGGACCGACAAAAGAGCAACTCCGTC
AGTAGCCCATTTAACAACCAGGCACCCCTACCGCATCTGCCGCAGGCCCA
TTTCTATGGCGCGCCAGATATCGATTTGCCTCTGTTCTCTGGCCAGAATA
GGGCCGCAACCGACGGTAGTTATTCATTCTGTGCGTTCGATACGATCATA
AGCCCGCCATCCAAAGCCTCCAGGATGGGAAGTAGCGTTCTCCTGGTCGG
CACGGATGGCGGCTTGGATATTCTTGCCATTGAAGATCGAAAAACGCGCC
CTGTAGGGAAGTTGGCAGGTCTCAATGGCCGCGTAATTGAAGCGAAGTTG
CTGAGCAACACTTCAACTAATGACACGTCTATACATTCCCGACCTCATAT
CGCTGTCATCATTCACGGCCCCACTGCTCAACCAGATGATGAGGGCCATG
CATCCTCCAATAGCTCGGAAGCAAATGATATTCCCACTGGAAGACAGTCG
GCCGCTGGAGGGCGTCCGAAAGAAGAGACCAGGTTTTACCAGACACGGGT
CGAGGTGTATTCTTTAAGGACCGGCGAGCACATCACAACGCTTCTGTCCA
CGCCGCCCACTCCCTGCTTTGGCAATATACCTGGTCTTCCTGCCCTGGCT
CCTTCACCGGCCGGGAATCTCAAGCTCTTTGTGAGCGGAAGCTACGTTGT
CGTAGCATCCGGTTCCAGTGGGGAAGTCTACATGTACAGCATGAGCAATT
ATCAGTTTCTAGGAAAGGCATGGACCAGTATCAAGTCAAAGGAATCTCGG
CGATACTCCACGTCCTCCAGCTCGACTGACCCAGATGGATCTCAATCCGA
ATCTCCTCATGGATCTCTCAACTCTGATAGTCCTATCGTGGCATTGAAGG
GAAGATGGCTAGCAATTGTCCCACCATCCGCAACTTACAGGGCTACTCTC
CGTGCTGCCGTGCCGACGTCCTTGTTGCAAGGGAAGGCGTTCGGGCTTGA
GACTCGAAGTCCCCCGTCGCGTCCGGCTATCACCTGCGCTACTGATGTCG
GAGAGGGCGAAAGCTTTTTCGGCAAGGTAGCCCGGGGCGTTACCCAGGAG
CTCATGCGAGGTGCACGGTGGATGGGTGACCAAGGACTACAAGCCTGGAA
CAATTACTGGAATAAGGAGCAAGCTCAAAGCATGCCAGCACGCCGCTCTC
CTAATTTGACGGAGTTTTCACCTCAGGGGTACAATCTCTTCCCTCCCACC
CATGCCCAGGACACCCAGTCTGTGTCCACTACCGAACCTGATTTGGTATC
AATCTTCGATCTGCGAAAGCTAGAGGAGGGCGAGGCCAAGAGTTCTTTGT
TCAATCCAGTGGCCACTTTTCAGGTGCCGAATGGCTGCAGCTTCCTTTCA
TTTTCTCCCAACGGTCTCATGTTATTTACTGCCAGTAAAAAGGGAGATGT
CCAGTATGTTTGGGATGTTATGCAGGCTAAATACTGTCGAGCCGGGGCTT
TCATGTCAGACGATCCAGCATCTGTGCAGCCGAGCGTGCGGCAGATTGCC
CGGTACCCGCGATTAACCACGTCCCATATAGTTGACGTGGTCTGGTGTCC
GCCGTCTGGGGACAAGCTCGCAGTGATTACGGGTAAACCGACGGTGCATG
TTTTTGACTTGCCTCGGAGCGCCTTTCAATGGCCTCCTTTTCGACGATCT
CTACCAAAACCTGCGAAACCGCCTACTGCTGATGCTCCGGCAGAAGAGCT
TCCCGACCGGGGGCCGGCTGCGAATCCATTGTCGGCAGCCTTCAAGATGG
TCGGCGGTAAGACGCAGCCCATTCTTGCCGCAGTCAGGGGGCGTACTCCC
TCCACCGGGGCCGCTTTCCCCTCCGTGGGTGGCTTTGCAATGCCTTCTGC
AGCTGGAGTAAGAGGGGGCAAGGCGGTTGCTGCTGGCCTTAGTAAATCAA
TGGGGGCCGCCGCCACCGGCACTGTCAAAACGGTCAACACCATCCGACAT
GGTGGTGAACATCGCCTGCACCTATCCAATCTTTCTCGGGACCCCGTTGC
GGCTCGTGTGACATGGATCATCCATAAAGGAATGCCATTCTTGGGCCTGA
TAGATGGGGGTTACTTCCGTCTGTACAGGATTAAACGCTCCACCTCACCC
AGTAAGAGTAGGCAGGTGCAATCGGTGATCGGAAACAAAGAACTTGAGTT
CCGCTTGCCTCCCCATATGCAGACACCTTGCGGTCCCATGACCGTGGGTC
CCGCCGCCACCACAGAAACAACGGTCTCTGCAACATTGGCTCTGCCATCC
GCGGCGCTACGACCGCCGCCAGCGTCGAAGCTCAAATGCCAGCCTCTTTC
GCAGGCGGAGATCGAGACAAACACACCATATCAGCCTTTCCACACCGACC
AGAGGGTAAACCTCTTTGTGTACAGTGAGGCCGACGACTCCGTGGGTTCA
GTCCCGACGGGTCAATGGACCTTCGGCGGCTCTCTAGCCACTACGAAGCT
TCACGTACGACCGTTCAGCGCCTCCAGCGAAGAAGACGATGACATGGTAC
ATGAACAACACCACGGGTTTGGAGCTGAAATGGAGAATCTAATCAGCCTG
GGAAATAGTACGGGCAATGTGGAAGAAGTGGTCATTACTACACGCAGGAA
GAAGAAGCAGGCTTCGGCCATGGCCCCGGGTGGCGGGGTCGATGACGGCT
TCTTTGAAAATGACTGCGAGGTCTTGGACTTCGCTCGGGACCGAGTCTAA
ATGCCACCGGCAGCTTCGGACGATTTGTTTCGCCAGCAGAGCCGGTCCTT
AGGTGACACCAGCCCCTTTCCAGAAGATCCCAGTCGAGCCACTTTGGAGC
ATGATCTCGGTGGAAAGACCAAGAAAAAGGGGAAAACCGGAACCAAGGGG
AAGAATAAAGCAGCCAAAGCAATCCCGAAGTCTACACCTGACGACCTTCT
AGAAGCAGAAGCACCGTCACCGTCACCGCCTCTGCAGGCTGAACCATCGT
CCTGCCCCAATCCAACACTGGAGCCGCCACCTAGCAACAATATCGTGTCA
CCGGTACTTGATGCCCTTGGCACTCTGGGGGACTCTCCGGAGAATGACAT
TGCTTACCGCACCGGTACTTGGGCCAAGTCCATCCCGTATGGCAAAAGTC
CTCCGAATGATGCCGTTGATGGCGAGTTCAACAGTGGGTCTCCCTTCGGT
TTCCTCACCAGTCAAGACAAAGGCGGATTCAGCCACCCCTCTTCGACGTC
TCCCCCTCCGGGAGCAAGGCCCTTGAGCTATGGGCGGGGTTACGCAACCA
GCAGTGTGTCTAGACAGCACTCCGTGGACCGACAAAAGAGCAACTCCGTC
AGTAGCCCATTTAACAACCAGGCACCCCTACCGCATCTGCCGCAGGCCCA
TTTCTATGGCGCGCCAGATATCGATTTGCCTCTGTTCTCTGGCCAGAATA
GGGCCGCAACCGACGGTAGTTATTCATTCTGTGCGTTCGATACGATCATA
AGCCCGCCATCCAAAGCCTCCAGGATGGGAAGTAGCGTTCTCCTGGTCGG
CACGGATGGCGGCTTGGATATTCTTGCCATTGAAGATCGAAAAACGCGCC
CTGTAGGGAAGTTGGCAGGTCTCAATGGCCGCGTAATTGAAGCGAAGTTG
CTGAGCAACACTTCAACTAATGACACGTCTATACATTCCCGACCTCATAT
CGCTGTCATCATTCACGGCCCCACTGCTCAACCAGATGATGAGGGCCATG
CATCCTCCAATAGCTCGGAAGCAAATGATATTCCCACTGGAAGACAGTCG
GCCGCTGGAGGGCGTCCGAAAGAAGAGACCAGGTTTTACCAGACACGGGT
CGAGGTGTATTCTTTAAGGACCGGCGAGCACATCACAACGCTTCTGTCCA
CGCCGCCCACTCCCTGCTTTGGCAATATACCTGGTCTTCCTGCCCTGGCT
CCTTCACCGGCCGGGAATCTCAAGCTCTTTGTGAGCGGAAGCTACGTTGT
CGTAGCATCCGGTTCCAGTGGGGAAGTCTACATGTACAGCATGAGCAATT
ATCAGTTTCTAGGAAAGGCATGGACCAGTATCAAGTCAAAGGAATCTCGG
CGATACTCCACGTCCTCCAGCTCGACTGACCCAGATGGATCTCAATCCGA
ATCTCCTCATGGATCTCTCAACTCTGATAGTCCTATCGTGGCATTGAAGG
GAAGATGGCTAGCAATTGTCCCACCATCCGCAACTTACAGGGCTACTCTC
CGTGCTGCCGTGCCGACGTCCTTGTTGCAAGGGAAGGCGTTCGGGCTTGA
GACTCGAAGTCCCCCGTCGCGTCCGGCTATCACCTGCGCTACTGATGTCG
GAGAGGGCGAAAGCTTTTTCGGCAAGGTAGCCCGGGGCGTTACCCAGGAG
CTCATGCGAGGTGCACGGTGGATGGGTGACCAAGGACTACAAGCCTGGAA
CAATTACTGGAATAAGGAGCAAGCTCAAAGCATGCCAGCACGCCGCTCTC
CTAATTTGACGGAGTTTTCACCTCAGGGGTACAATCTCTTCCCTCCCACC
CATGCCCAGGACACCCAGTCTGTGTCCACTACCGAACCTGATTTGGTATC
AATCTTCGATCTGCGAAAGCTAGAGGAGGGCGAGGCCAAGAGTTCTTTGT
TCAATCCAGTGGCCACTTTTCAGGTGCCGAATGGCTGCAGCTTCCTTTCA
TTTTCTCCCAACGGTCTCATGTTATTTACTGCCAGTAAAAAGGGAGATGT
CCAGTATGTTTGGGATGTTATGCAGGCTAAATACTGTCGAGCCGGGGCTT
TCATGTCAGACGATCCAGCATCTGTGCAGCCGAGCGTGCGGCAGATTGCC
CGGTACCCGCGATTAACCACGTCCCATATAGTTGACGTGGTCTGGTGTCC
GCCGTCTGGGGACAAGCTCGCAGTGATTACGGGTAAACCGACGGTGCATG
TTTTTGACTTGCCTCGGAGCGCCTTTCAATGGCCTCCTTTTCGACGATCT
CTACCAAAACCTGCGAAACCGCCTACTGCTGATGCTCCGGCAGAAGAGCT
TCCCGACCGGGGGCCGGCTGCGAATCCATTGTCGGCAGCCTTCAAGATGG
TCGGCGGTAAGACGCAGCCCATTCTTGCCGCAGTCAGGGGGCGTACTCCC
TCCACCGGGGCCGCTTTCCCCTCCGTGGGTGGCTTTGCAATGCCTTCTGC
AGCTGGAGTAAGAGGGGGCAAGGCGGTTGCTGCTGGCCTTAGTAAATCAA
TGGGGGCCGCCGCCACCGGCACTGTCAAAACGGTCAACACCATCCGACAT
GGTGGTGAACATCGCCTGCACCTATCCAATCTTTCTCGGGACCCCGTTGC
GGCTCGTGTGACATGGATCATCCATAAAGGAATGCCATTCTTGGGCCTGA
TAGATGGGGGTTACTTCCGTCTGTACAGGATTAAACGCTCCACCTCACCC
AGTAAGAGTAGGCAGGTGCAATCGGTGATCGGAAACAAAGAACTTGAGTT
CCGCTTGCCTCCCCATATGCAGACACCTTGCGGTCCCATGACCGTGGGTC
CCGCCGCCACCACAGAAACAACGGTCTCTGCAACATTGGCTCTGCCATCC
GCGGCGCTACGACCGCCGCCAGCGTCGAAGCTCAAATGCCAGCCTCTTTC
GCAGGCGGAGATCGAGACAAACACACCATATCAGCCTTTCCACACCGACC
AGAGGGTAAACCTCTTTGTGTACAGTGAGGCCGACGACTCCGTGGGTTCA
GTCCCGACGGGTCAATGGACCTTCGGCGGCTCTCTAGCCACTACGAAGCT
TCACGTACGACCGTTCAGCGCCTCCAGCGAAGAAGACGATGACATGGTAC
ATGAACAACACCACGGGTTTGGAGCTGAAATGGAGAATCTAATCAGCCTG
GGAAATAGTACGGGCAATGTGGAAGAAGTGGTCATTACTACACGCAGGAA
GAAGAAGCAGGCTTCGGCCATGGCCCCGGGTGGCGGGGTCGATGACGGCT
TCTTTGAAAATGACTGCGAGGTCTTGGACTTCGCTCGGGACCGAGTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1244519..1247903 + |
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