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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1261782..1262475- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000421-T1 ID=CBS51388_000421-T1|Name=CBS51388_000421-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=694bp|location=Sequence derived from alignment at An01:1261782..1262475- (Aspergillus niger CBS 513.88)
ATGACAGACGTCAAAGACACCCGCAAACCAGACCAAGTCTTCACATCAGC
GGATCGTATCCGGCAATTGAACGAAATAGACAAGGTAAGTTCACAGAAAA
GAAATAGAGGCCGGGATTAATTCCCCGCGCGACACCACCGAAATGCTGCC
TAGCTAGCGATGGATACTCAACTTCCACGCTACTACATTATTTATGCTGT
GTCATTGACTTCATTCCACCCTCACTAATCTCCGCAAATTACTACAGGAT
GTGGCCAAGCTAATTCACTCCGCGGGTCTTGCAATTCAAGCCCTGACCAA
CGCTCGGTCGGGCGAGTCACCTTCGGACAACTCCCTCGCATCCCACCAAG
CCCGCTTCAAGGAGGCCACTTCGCAATACTTCGCCCTCCTTTCGTCCATT
GACGTTCGACTCCGTCGTCAGGTGTATGCTCTGGAGGAGGCGTCTATTCT
TGCGCCGGAGACAGCGTCGAGAGCGGAAAATCTACCCGGGGCGAGCAGTG
GCGGGGTGGCGGGCGCATCGTCGAACCCGCTCGATGTTAGTTGGCTCAAC
AGTCGGAAGGACACGGTGGGCAAGGATAAGGAAGCGGAGTTGTGGGCTGC
TGCGAGGGAGTTCGTGGAGCGGATTAGCAATCCGGCGTCTGTGAGCTCGG
GAGCGAAGACAGAGAGCGAGCAGGAGAAGATGGAGGTTGATTAG back to topCoding sequence (CDS) from alignment at An01:1261782..1262475- >CBS51388_000421-T1 ID=CBS51388_000421-T1|Name=CBS51388_000421-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1062bp|location=Sequence derived from alignment at An01:1261782..1262475- (Aspergillus niger CBS 513.88)
GATGTGGCCAAGCTAATTCACTCCGCGGGTCTTGCAATTCAAGCCCTGAC
CAACGCTCGGTCGGGCGAGTCACCTTCGGACAACTCCCTCGCATCCCACC
AAGCCCGCTTCAAGGAGGCCACTTCGCAATACTTCGCCCTCCTTTCGTCC
ATTGACGTTCGACTCCGTCGTCAGGTGTATGCTCTGGAGGAGGCGTCTAT
TCTTGCGCCGGAGACAGCGTCGAGAGCGGAAAATCTACCCGGGGCGAGCA
GTGGCGGGGTGGCGGGCGCATCGTCGAACCCGCTCGATGTTAGTTGGCTC
AACAGTCGGAAGGACACGGTGGGCAAGGATAAGGAAGCGGAGTTGTGGGC
TGCTGCGAGGGAGTTCGTGGAGCGGATTAGCAATCCGGCGTCTGTGAGCT
CGGGAGCGAAGACAGAGAGCGAGCAGGAGAAGATGGAGGTTGATTAGATG
ACAGACGTCAAAGACACCCGCAAACCAGACCAAGTCTTCACATCAGCGGA
TCGTATCCGGCAATTGAACGAAATAGACAAGGATGTGGCCAAGCTAATTC
ACTCCGCGGGTCTTGCAATTCAAGCCCTGACCAACGCTCGGTCGGGCGAG
TCACCTTCGGACAACTCCCTCGCATCCCACCAAGCCCGCTTCAAGGAGGC
CACTTCGCAATACTTCGCCCTCCTTTCGTCCATTGACGTTCGACTCCGTC
GTCAGGTGTATGCTCTGGAGGAGGCGTCTATTCTTGCGCCGGAGACAGCG
TCGAGAGCGGAAAATCTACCCGGGGCGAGCAGTGGCGGGGTGGCGGGCGC
ATCGTCGAACCCGCTCGATGTTAGTTGGCTCAACAGTCGGAAGGACACGG
TGGGCAAGGATAAGGAAGCGGAGTTGTGGGCTGCTGCGAGGGAGTTCGTG
GAGCGGATTAGCAATCCGGCGTCTGTGAGCTCGGGAGCGAAGACAGAGAG
CGAGCAGGAGAAGATGGAGGTTGATTAGATGACAGACGTCAAAGACACCC
GCAAACCAGACCAAGTCTTCACATCAGCGGATCGTATCCGGCAATTGAAC
GAAATAGACAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019404 |
| DBxref | PFAM:PF10280 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1261782..1262475 - |
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