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CBS51388_000424-T1, CBS51388_000424-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000424-T1
Unique NameCBS51388_000424-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1268607..1270241+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000424-T1 ID=CBS51388_000424-T1|Name=CBS51388_000424-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1635bp|location=Sequence derived from alignment at An01:1268607..1270241+ (Aspergillus niger CBS 513.88)
ATGGTGTCCCTTAAGTTTAGACGAAGCGACGAGTCCGACAGGACCGGTGA
GCAGCGCGACCGAGAGGATGAGCGACGACACGACGAGCCGGATGAGCGTA
CACGACTGCTCCCGCGCGAGCCCCCGGCCTATCTGAGCCCCGATGATCCT
GCTGTGAGTTTCGCATAGAAACACTCCCTTCGCTTGGAAGATGGCTAACA
CCAGGCTCTGTAGGTCTCTCCCTACAATCTCTGGGGCATACGAGCCCTGC
GAGGCCTCTCCTCCCTCTTCCTCGCCATTAGCTTCATCTGGTGGACCTTT
CTTCTCGTCTCCCTTTTCGTCAGTCCACCCATGATGCACTCGCGCGGATC
CGGATTCTTCAGTTTCGCCTATACCACTCTGACAACCGGATATCTTCTTC
TCGGGCTCCTATTCTTCGCTATCCCGTCCAAACCCATGTCCGTGTCCGGA
ATTATCATCGCCATCTTCCTCCTCATTGACATGATCCTCACTCTAGCCGT
CCCTCGCATTCGGCTTGAAGAAGGCTGGGTGGGAGTTGCATCGGTAGTCT
GGGCGGCCTTCATCTCTCTCTATACAATTGCTCAGAACCACTCCGTGGCT
TGGGGTAAGCGGGAGGAAGAAGAGCGCCTGACAGGGCGGCCGGAAACCCG
CCGTCCCCTGCGCGAATGGGTCGCTGTTCTCATTCAAACTGTCTTCCTGG
TCATCTTCGCCATCATTGTCGTCCTGTTTACCGCCACCCTGATTCTTCGC
GCCCGCGACGCATCTCTCCCCGCTCCCGGCAAGAAATACTACGTCAACGG
CGACAGCTACCAAGTTCACCTTCACTGCGTCGGTAACACTACCCACAGTC
TCCAGAATGACATGCCGACGATCCTCATTGAAGGCGGAGACTGGCCCGTC
GAACATACTCTACAGCCCTTCATCCATGATGCATACCAGTCCGGTCTCGT
CCCTCGCTACTGCTACTGGGATCGTCCCGGTTTCGGCTGGTCTGACAACG
CTCCTTCCCCCTTCTCCGCCGGCATGGCAGCAGACGCCCTATCCGAAGCA
CTCGCTCTCGCCGGCGAAGAGGGTCCCTGGATCCTCGTCTCCGCCAGCGT
TGGCGGCATCTACAGCCGCATCTTCGCTAGTCGTCACCTGCTCGAGGTTT
CCGGGATTCTTCTTATCGACAGTCTTCACGAAGACTACCTCAGTAACATC
GGCTCCCCCGGCCGCGGCTTCACCCTTTGGCTTCGCGGCGTCTTCTCCCC
GCTGGGACTGGACCGTATCGCCGGTGCCATTTTCAAGGGACGCACGCGCG
AAGACCGCGTCTACGGGCGCAGCTCTTACCAAACGGGGAAGGTTGTCAAG
GCGAAACTACAGGAGAACCTCGTTGCTGAGTCGATGACCTCCTCGGAGAT
CCAGACTGCCAGACACGTCCAGATGGCGGATACGCCACTCGTGGTGATTA
GCTCAGGTGTCGAGGTGCGGAAGAGCGAGAAGTGGGCGAAGAGACAGGAG
GAGTTGACGAAAATTACGAAGAATCTCAAGAACTTCGATATTGTGAAGGG
TGCGCCGCACGAGGTTTGGCGGGATGTGGAGGGGAGGAGAGTTATTGAGA
AGAGATTGGGTGAATTAATTGGAAAGGATGAGTAG
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Coding sequence (CDS) from alignment at An01:1268607..1270241+

>CBS51388_000424-T1 ID=CBS51388_000424-T1|Name=CBS51388_000424-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3150bp|location=Sequence derived from alignment at An01:1268607..1270241+ (Aspergillus niger CBS 513.88)
ATGGTGTCCCTTAAGTTTAGACGAAGCGACGAGTCCGACAGGACCGGTGA
GCAGCGCGACCGAGAGGATGAGCGACGACACGACGAGCCGGATGAGCGTA
CACGACTGCTCCCGCGCGAGCCCCCGGCCTATCTGAGCCCCGATGATCCT
GCTGTCTCTCCCTACAATCTCTGGGGCATACGAGCCCTGCGAGGCCTCTC
CTCCCTCTTCCTCGCCATTAGCTTCATCTGGTGGACCTTTCTTCTCGTCT
CCCTTTTCGTCAGTCCACCCATGATGCACTCGCGCGGATCCGGATTCTTC
AGTTTCGCCTATACCACTCTGACAACCGGATATCTTCTTCTCGGGCTCCT
ATTCTTCGCTATCCCGTCCAAACCCATGTCCGTGTCCGGAATTATCATCG
CCATCTTCCTCCTCATTGACATGATCCTCACTCTAGCCGTCCCTCGCATT
CGGCTTGAAGAAGGCTGGGTGGGAGTTGCATCGGTAGTCTGGGCGGCCTT
CATCTCTCTCTATACAATTGCTCAGAACCACTCCGTGGCTTGGGGTAAGC
GGGAGGAAGAAGAGCGCCTGACAGGGCGGCCGGAAACCCGCCGTCCCCTG
CGCGAATGGGTCGCTGTTCTCATTCAAACTGTCTTCCTGGTCATCTTCGC
CATCATTGTCGTCCTGTTTACCGCCACCCTGATTCTTCGCGCCCGCGACG
CATCTCTCCCCGCTCCCGGCAAGAAATACTACGTCAACGGCGACAGCTAC
CAAGTTCACCTTCACTGCGTCGGTAACACTACCCACAGTCTCCAGAATGA
CATGCCGACGATCCTCATTGAAGGCGGAGACTGGCCCGTCGAACATACTC
TACAGCCCTTCATCCATGATGCATACCAGTCCGGTCTCGTCCCTCGCTAC
TGCTACTGGGATCGTCCCGGTTTCGGCTGGTCTGACAACGCTCCTTCCCC
CTTCTCCGCCGGCATGGCAGCAGACGCCCTATCCGAAGCACTCGCTCTCG
CCGGCGAAGAGGGTCCCTGGATCCTCGTCTCCGCCAGCGTTGGCGGCATC
TACAGCCGCATCTTCGCTAGTCGTCACCTGCTCGAGGTTTCCGGGATTCT
TCTTATCGACAGTCTTCACGAAGACTACCTCAGTAACATCGGCTCCCCCG
GCCGCGGCTTCACCCTTTGGCTTCGCGGCGTCTTCTCCCCGCTGGGACTG
GACCGTATCGCCGGTGCCATTTTCAAGGGACGCACGCGCGAAGACCGCGT
CTACGGGCGCAGCTCTTACCAAACGGGGAAGGTTGTCAAGGCGAAACTAC
AGGAGAACCTCGTTGCTGAGTCGATGACCTCCTCGGAGATCCAGACTGCC
AGACACGTCCAGATGGCGGATACGCCACTCGTGGTGATTAGCTCAGGTGT
CGAGGTGCGGAAGAGCGAGAAGTGGGCGAAGAGACAGGAGGAGTTGACGA
AAATTACGAAGAATCTCAAGAACTTCGATATTGTGAAGGGTGCGCCGCAC
GAGGTTTGGCGGGATGTGGAGGGGAGGAGAGTTATTGAGAAGAGATTGGG
TGAATTAATTGGAAAGGATGAGTAGATGGTGTCCCTTAAGTTTAGACGAA
GCGACGAGTCCGACAGGACCGGTGAGCAGCGCGACCGAGAGGATGAGCGA
CGACACGACGAGCCGGATGAGCGTACACGACTGCTCCCGCGCGAGCCCCC
GGCCTATCTGAGCCCCGATGATCCTGCTGTCTCTCCCTACAATCTCTGGG
GCATACGAGCCCTGCGAGGCCTCTCCTCCCTCTTCCTCGCCATTAGCTTC
ATCTGGTGGACCTTTCTTCTCGTCTCCCTTTTCGTCAGTCCACCCATGAT
GCACTCGCGCGGATCCGGATTCTTCAGTTTCGCCTATACCACTCTGACAA
CCGGATATCTTCTTCTCGGGCTCCTATTCTTCGCTATCCCGTCCAAACCC
ATGTCCGTGTCCGGAATTATCATCGCCATCTTCCTCCTCATTGACATGAT
CCTCACTCTAGCCGTCCCTCGCATTCGGCTTGAAGAAGGCTGGGTGGGAG
TTGCATCGGTAGTCTGGGCGGCCTTCATCTCTCTCTATACAATTGCTCAG
AACCACTCCGTGGCTTGGGGTAAGCGGGAGGAAGAAGAGCGCCTGACAGG
GCGGCCGGAAACCCGCCGTCCCCTGCGCGAATGGGTCGCTGTTCTCATTC
AAACTGTCTTCCTGGTCATCTTCGCCATCATTGTCGTCCTGTTTACCGCC
ACCCTGATTCTTCGCGCCCGCGACGCATCTCTCCCCGCTCCCGGCAAGAA
ATACTACGTCAACGGCGACAGCTACCAAGTTCACCTTCACTGCGTCGGTA
ACACTACCCACAGTCTCCAGAATGACATGCCGACGATCCTCATTGAAGGC
GGAGACTGGCCCGTCGAACATACTCTACAGCCCTTCATCCATGATGCATA
CCAGTCCGGTCTCGTCCCTCGCTACTGCTACTGGGATCGTCCCGGTTTCG
GCTGGTCTGACAACGCTCCTTCCCCCTTCTCCGCCGGCATGGCAGCAGAC
GCCCTATCCGAAGCACTCGCTCTCGCCGGCGAAGAGGGTCCCTGGATCCT
CGTCTCCGCCAGCGTTGGCGGCATCTACAGCCGCATCTTCGCTAGTCGTC
ACCTGCTCGAGGTTTCCGGGATTCTTCTTATCGACAGTCTTCACGAAGAC
TACCTCAGTAACATCGGCTCCCCCGGCCGCGGCTTCACCCTTTGGCTTCG
CGGCGTCTTCTCCCCGCTGGGACTGGACCGTATCGCCGGTGCCATTTTCA
AGGGACGCACGCGCGAAGACCGCGTCTACGGGCGCAGCTCTTACCAAACG
GGGAAGGTTGTCAAGGCGAAACTACAGGAGAACCTCGTTGCTGAGTCGAT
GACCTCCTCGGAGATCCAGACTGCCAGACACGTCCAGATGGCGGATACGC
CACTCGTGGTGATTAGCTCAGGTGTCGAGGTGCGGAAGAGCGAGAAGTGG
GCGAAGAGACAGGAGGAGTTGACGAAAATTACGAAGAATCTCAAGAACTT
CGATATTGTGAAGGGTGCGCCGCACGAGGTTTGGCGGGATGTGGAGGGGA
GGAGAGTTATTGAGAAGAGATTGGGTGAATTAATTGGAAAGGATGAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000424CBS51388_000424Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000424-T1.exon1CBS51388_000424-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000424-T1.exon2CBS51388_000424-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000424-T1.cdsCBS51388_000424-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000424-T1CBS51388_000424-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261YRA
DBxrefInterPro:IPR019431
DBxrefInterPro:IPR029058
DBxrefPFAM:PF10329
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1268607..1270241 +
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