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CBS51388_000428-T1, CBS51388_000428-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000428-T1
Unique NameCBS51388_000428-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1279269..1280626+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000428-T1 ID=CBS51388_000428-T1|Name=CBS51388_000428-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1358bp|location=Sequence derived from alignment at An01:1279269..1280626+ (Aspergillus niger CBS 513.88)
ATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGA
ACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCT
ATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGA
TTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGTACTAGTAACC
TCAAGTCGGCACCATGCTGATGGTCCCAGTCCATACCCAGAGACAGTTGT
TAACCAGCCTGCTTTTCTCGTTCATAGGGTCAAAGAAGATGGTACCGTTT
ATGTAACCAGTCCTCTCTCCCCATTGTGAGGGGCTGCTCTGGCTGACAAG
ACATGACTTCAAAACCAGCTTAGTGACGAATGGGCCGATGCGCAAATGCC
CGTCGACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGC
AGTATTCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGC
AGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTT
TGTTCGGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCG
ACGGTACGTGTAATGGAGCCGAGCCCCTCTCCCCTTATCATCATGGATGC
GTCATGTCGGTATAGTGAACAGAAAATAAGGTAAAATTGTGTGCATACCC
TAAGGCTAACCAACCTTGTGCTGGCCCAACAGTGGATTGGGAATACCCCT
CCGACCCACAAGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGC
GAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGG
ACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTG
ACCTGATCAATATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAG
TCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATG
CCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGC
TCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGA
GTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTA
TAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGG
GGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACA
CCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGG
CGGGTTATTCTACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAAGT
CTGATTGA
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Coding sequence (CDS) from alignment at An01:1279269..1280626+

>CBS51388_000428-T1 ID=CBS51388_000428-T1|Name=CBS51388_000428-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4296bp|location=Sequence derived from alignment at An01:1279269..1280626+ (Aspergillus niger CBS 513.88)
ATGTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGA
ACGCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCT
ATTATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGA
TTGGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGGTCAAAGAAGA
TGGTACCGTTTATCTTAGTGACGAATGGGCCGATGCGCAAATGCCCGTCG
ACGGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGCAGTAT
TCCAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGCAGTGA
GAACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTTTGTTC
GGAGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCGACGTG
GATTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACTATATCCGTCT
GCTGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCT
CTTGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGATCTTTCCAAG
GCGCAACTCTATCTTGACCTGATCAATATCATGGCGTATGATTTCTCGGG
CCCTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATC
CCGCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCTCAACCAGGGC
GTCGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACGGCCGCTCGTT
CCTGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAG
ACGGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCAT
CACGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAGATGGCGGCTT
CGTCACATATGACACACCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCA
CAAAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGGAGGCGACGCA
CGGGGACCGCGAAAGTCTGATTGAATGTTCTCCGGCTCCTCCCTCTTTCC
GCACTGGCGGCGCAAAGCAGCCGAACGCTCCAGTAATAGTTCCTACGAGG
TGCCCTTCTTCCTGAACGCTGCCTATTATCCCAATTGGAGGATATACCGG
AAACAGCCTCCGTCGGCCCTTCGATTGGGCTTCATTTCTCATATCTTCTA
CGCGTTTGCATGGGTCAAAGAAGATGGTACCGTTTATCTTAGTGACGAAT
GGGCCGATGCGCAAATGCCCGTCGACGGCACCAACGGCTGCCTGCGGGCC
TTCGCGCAACTGAAGCCGCAGTATTCCAAGATGAAACTCATTCTCTCAGT
CGGAGGAGGCGGCAAGGGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGTC
AATCCCGCACCGAGACGTTTGTTCGGAGCGCGAGAGCACTGGTGGATCAA
TTTGGTCTGGACGGCATCGACGTGGATTGGGAATACCCCTCCGACCCACA
AGAAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTGC
CGGCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGGACCATGGGCT
CTCCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTGACCTGATCAA
TATCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAGTCGGGTCATC
AGGCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATGCCAAAACTCT
ATCTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGGG
CATCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAGC
GGTATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTATAGCCAGCTG
CCGCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGGGGGCAGCATA
CTGCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACACCCCAGACAG
TGCAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGGCGGGTTATTC
TACTGGCATATTGGAGGCGACGCACGGGGACCGCGAAAGTCTGATTGAAT
GTTCTCCGGCTCCTCCCTCTTTCCGCACTGGCGGCGCAAAGCAGCCGAAC
GCTCCAGTAATAGTTCCTACGAGGTGCCCTTCTTCCTGAACGCTGCCTAT
TATCCCAATTGGAGGATATACCGGAAACAGCCTCCGTCGGCCCTTCGATT
GGGCTTCATTTCTCATATCTTCTACGCGTTTGCATGGGTCAAAGAAGATG
GTACCGTTTATCTTAGTGACGAATGGGCCGATGCGCAAATGCCCGTCGAC
GGCACCAACGGCTGCCTGCGGGCCTTCGCGCAACTGAAGCCGCAGTATTC
CAAGATGAAACTCATTCTCTCAGTCGGAGGAGGCGGCAAGGGCAGTGAGA
ACTTCGCCCAAGTGGCCCGCAGTCAATCCCGCACCGAGACGTTTGTTCGG
AGCGCGAGAGCACTGGTGGATCAATTTGGTCTGGACGGCATCGACGTGGA
TTGGGAATACCCCTCCGACCCACAAGAAGGATCGGACTATATCCGTCTGC
TGGCGCGACTGCGCGAAGTCCTGCCGGCCCCGCGTTATGTTCTGGCCTCT
TGTCTCCCGGCCGGACCATGGGCTCTCCGTAACATCGATCTTTCCAAGGC
GCAACTCTATCTTGACCTGATCAATATCATGGCGTATGATTTCTCGGGCC
CTTGGGAGAACCAGTCGGGTCATCAGGCCCAGCTCTTCAGCAAGCATCCC
GCAGCCATTTCATGCCAAAACTCTATCTCGTACGTGCTCAACCAGGGCGT
CGACCCCAAGAAGCTCCTTCTGGGCATCCCCGCATACGGCCGCTCGTTCC
TGGGTAGCACTGGAGTTGGTCAGCGGTATGTAGGCTGTGGCGGTGAAGAC
GGCGTCTTCGACTATAGCCAGCTGCCGCGACCGGGAGCCAAGGAGCATCA
CGACAGCAGTCTGGGGGCAGCATACTGCGTAGGGGGAGATGGCGGCTTCG
TCACATATGACACACCCCAGACAGTGCAGCAGAAGGCGAAATTCGTCACA
AAGATGAAGCTGGGCGGGTTATTCTACTGGCATATTGGAGGCGACGCACG
GGGACCGCGAAAGTCTGATTGAATGTTCTCCGGCTCCTCCCTCTTTCCGC
ACTGGCGGCGCAAAGCAGCCGAACGCTCCAGTAATAGTTCCTACGAGGTG
CCCTTCTTCCTGAACGCTGCCTATTATCCCAATTGGAGGATATACCGGAA
ACAGCCTCCGTCGGCCCTTCGATTGGGCTTCATTTCTCATATCTTCTACG
CGTTTGCATGGGTCAAAGAAGATGGTACCGTTTATCTTAGTGACGAATGG
GCCGATGCGCAAATGCCCGTCGACGGCACCAACGGCTGCCTGCGGGCCTT
CGCGCAACTGAAGCCGCAGTATTCCAAGATGAAACTCATTCTCTCAGTCG
GAGGAGGCGGCAAGGGCAGTGAGAACTTCGCCCAAGTGGCCCGCAGTCAA
TCCCGCACCGAGACGTTTGTTCGGAGCGCGAGAGCACTGGTGGATCAATT
TGGTCTGGACGGCATCGACGTGGATTGGGAATACCCCTCCGACCCACAAG
AAGGATCGGACTATATCCGTCTGCTGGCGCGACTGCGCGAAGTCCTGCCG
GCCCCGCGTTATGTTCTGGCCTCTTGTCTCCCGGCCGGACCATGGGCTCT
CCGTAACATCGATCTTTCCAAGGCGCAACTCTATCTTGACCTGATCAATA
TCATGGCGTATGATTTCTCGGGCCCTTGGGAGAACCAGTCGGGTCATCAG
GCCCAGCTCTTCAGCAAGCATCCCGCAGCCATTTCATGCCAAAACTCTAT
CTCGTACGTGCTCAACCAGGGCGTCGACCCCAAGAAGCTCCTTCTGGGCA
TCCCCGCATACGGCCGCTCGTTCCTGGGTAGCACTGGAGTTGGTCAGCGG
TATGTAGGCTGTGGCGGTGAAGACGGCGTCTTCGACTATAGCCAGCTGCC
GCGACCGGGAGCCAAGGAGCATCACGACAGCAGTCTGGGGGCAGCATACT
GCGTAGGGGGAGATGGCGGCTTCGTCACATATGACACACCCCAGACAGTG
CAGCAGAAGGCGAAATTCGTCACAAAGATGAAGCTGGGCGGGTTATTCTA
CTGGCATATTGGAGGCGACGCACGGGGACCGCGAAAGTCTGATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008061chitin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000428CBS51388_000428Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000428-T1.exon1CBS51388_000428-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000428-T1.exon2CBS51388_000428-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000428-T1.exon3CBS51388_000428-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000428-T1.exon4CBS51388_000428-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000428-T1.cdsCBS51388_000428-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000428-T1CBS51388_000428-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteCAZy:GH18
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR001579
DBxrefInterPro:IPR029070
DBxrefInterPro:IPR001223
DBxrefInterPro:IPR011583
DBxrefPFAM:PF00704
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1279269..1280626 +
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