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CBS51388_000439-T1, CBS51388_000439-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000439-T1
Unique NameCBS51388_000439-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1308141..1309336+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000439-T1 ID=CBS51388_000439-T1|Name=CBS51388_000439-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1196bp|location=Sequence derived from alignment at An01:1308141..1309336+ (Aspergillus niger CBS 513.88)
ATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGA
GCGGTTCTCTGGGTACAGCTTCCCCCCCGCCTCCGGTATACGCCAGGCTA
CCAGCTAACAGCTCCATTCATGCTTCCTTCAGAACCCCGCCCGTATCAAT
CGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGC
CAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGG
GAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCC
CTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATC
TAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGC
CTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATT
CGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGA
CTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTAT
CGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGT
GATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGG
TGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAA
AATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGG
TGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTT
TCGGTATGTATTCGTTGTTATGCATCACCCACCGTTCGCAGTCACTAACC
GCTTCTAGTCTTGTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAGA
ACATCTCCCACATCCAGATATTCCGTGATTACTTCCATTACCACATCAAA
GCATCCAAGGTAGCTTTATATGTCATAATGCAGGCCAGTTCAATATGCTT
ACTAAGTCTCCAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAG
ACTTCCTTCAAGGTAAGAAGCGACCCCTAACAATTGTGGTATGTCCAGTT
CACTAATGAATGATAGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCG
AGAAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAG
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Coding sequence (CDS) from alignment at An01:1308141..1309336+

>CBS51388_000439-T1 ID=CBS51388_000439-T1|Name=CBS51388_000439-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4815bp|location=Sequence derived from alignment at An01:1308141..1309336+ (Aspergillus niger CBS 513.88)
ATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGA
GCGGTTCTCTGGAACCCCGCCCGTATCAATCGATCAGATCGTTTCCGACT
TTGACGGAGTGACCTTTCATCTGTCTACGCCAGAATCCAAAACCAAGATC
CTCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTGTCCAGTACGGCGC
CCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATTGTCACCCCAGAGC
CCGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAACCTGCCCGCCGAG
CAAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGCTGATGAAGCGCAA
CGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAATTCGCCAAGTTAG
CCGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCCCCAGGGAGTTAAG
GAGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGGAGGAAGCGATTTA
TATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTCAGCACAGTGTTCC
GGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCTGCAGGAATTCGTC
GATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTCCCCAGGTACTCTT
CCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTTCAGAACG
GTAATGACGGTAGAATCAGCTACGTCACTTTCGTCTTGTTCCCTCGTCAC
CTAACCCCCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTCCG
TGATTACTTCCATTACCACATCAAAGCATCCAAGGCATACATCCACACTA
GGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTTCTCAACCGGGCGCGG
CCCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAGTGGCCGTACTTTCAG
GGTTCAGGGATAGATGCTTTTGCTAGACTATCACAACGTTCTCATCCACT
CCCTCCTGACGGAGCGGTTCTCTGGAACCCCGCCCGTATCAATCGATCAG
ATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGTCTACGCCAGAATC
CAAAACCAAGATCCTCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTG
TCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATT
GTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAA
CCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGC
TGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAA
TTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCC
CCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGG
AGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTC
AGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCT
GCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTC
CCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCT
GGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACGTCACTTTCGTCTT
GTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAGAACATCTCCCACA
TCCAGATATTCCGTGATTACTTCCATTACCACATCAAAGCATCCAAGGCA
TACATCCACACTAGGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTTCT
CAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAGTG
GCCGTACTTTCAGGGTTCAGGGATAGATGCTTTTGCTAGACTATCACAAC
GTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTCTGGAACCCCGCCCGT
ATCAATCGATCAGATCGTTTCCGACTTTGACGGAGTGACCTTTCATCTGT
CTACGCCAGAATCCAAAACCAAGATCCTCATCTCCATCAACGTGAAATGC
TTCCGGGAGCTTGTCCAGTACGGCGCCCAGGAGGTGCTGGAAAGGGAATA
CGGCCCCTACATTGTCACCCCAGAGCCCGGCTATGACTTCTCCGTCCTGA
TCGATCTAGAGAACCTGCCCGCCGAGCAAGAGGCGAAGGATGAACTCATC
ATGCGCCTGGCGCTGATGAAGCGCAACGCCATGGCCGCCCCCTTCGAGAG
AGCATTCGATGAATTCGCCAAGTTAGCCGAAGAGGCTTCGAGATACACAA
GCGAGACTGCGCCCCAGGGAGTTAAGGAGGGAGGAGAGGTTATGGCCATT
CACTATCGAGAGGAGGAAGCGATTTATATCAAGGCCAGCCATGATCGTGT
CACGGTGATCTTCAGCACAGTGTTCCGGGAGGAGACAGATCGCATCTTTG
GCAAGGTGTTCCTGCAGGAATTCGTCGATGCCAGACGCCGTGTCCTCACC
CTGCAAAATGCTCCCCAGGTACTCTTCCGAAACGACTGTCCTCTGGAGCT
GGCCGGTGTGCCTGGCCTTCAGAACGGTAATGACGGTAGAATCAGCTACG
TCACTTTCGTCTTGTTCCCTCGTCACCTAACCCCCCAGAGACGCTATGAG
AACATCTCCCACATCCAGATATTCCGTGATTACTTCCATTACCACATCAA
AGCATCCAAGGCATACATCCACACTAGGATGCGCAAGAGGACCGCAGACT
TCCTTCAAGTTCTCAACCGGGCGCGGCCCGAGAACGAGGAGCGAGAAAGG
AAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGATAGATGCTTTTGCT
AGACTATCACAACGTTCTCATCCACTCCCTCCTGACGGAGCGGTTCTCTG
GAACCCCGCCCGTATCAATCGATCAGATCGTTTCCGACTTTGACGGAGTG
ACCTTTCATCTGTCTACGCCAGAATCCAAAACCAAGATCCTCATCTCCAT
CAACGTGAAATGCTTCCGGGAGCTTGTCCAGTACGGCGCCCAGGAGGTGC
TGGAAAGGGAATACGGCCCCTACATTGTCACCCCAGAGCCCGGCTATGAC
TTCTCCGTCCTGATCGATCTAGAGAACCTGCCCGCCGAGCAAGAGGCGAA
GGATGAACTCATCATGCGCCTGGCGCTGATGAAGCGCAACGCCATGGCCG
CCCCCTTCGAGAGAGCATTCGATGAATTCGCCAAGTTAGCCGAAGAGGCT
TCGAGATACACAAGCGAGACTGCGCCCCAGGGAGTTAAGGAGGGAGGAGA
GGTTATGGCCATTCACTATCGAGAGGAGGAAGCGATTTATATCAAGGCCA
GCCATGATCGTGTCACGGTGATCTTCAGCACAGTGTTCCGGGAGGAGACA
GATCGCATCTTTGGCAAGGTGTTCCTGCAGGAATTCGTCGATGCCAGACG
CCGTGTCCTCACCCTGCAAAATGCTCCCCAGGTACTCTTCCGAAACGACT
GTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTTCAGAACGGTAATGACGGT
AGAATCAGCTACGTCACTTTCGTCTTGTTCCCTCGTCACCTAACCCCCCA
GAGACGCTATGAGAACATCTCCCACATCCAGATATTCCGTGATTACTTCC
ATTACCACATCAAAGCATCCAAGGCATACATCCACACTAGGATGCGCAAG
AGGACCGCAGACTTCCTTCAAGTTCTCAACCGGGCGCGGCCCGAGAACGA
GGAGCGAGAAAGGAAGACGGCCAGTGGCCGTACTTTCAGGGTTCAGGGAT
AGATGCTTTTGCTAGACTATCACAACGTTCTCATCCACTCCCTCCTGACG
GAGCGGTTCTCTGGAACCCCGCCCGTATCAATCGATCAGATCGTTTCCGA
CTTTGACGGAGTGACCTTTCATCTGTCTACGCCAGAATCCAAAACCAAGA
TCCTCATCTCCATCAACGTGAAATGCTTCCGGGAGCTTGTCCAGTACGGC
GCCCAGGAGGTGCTGGAAAGGGAATACGGCCCCTACATTGTCACCCCAGA
GCCCGGCTATGACTTCTCCGTCCTGATCGATCTAGAGAACCTGCCCGCCG
AGCAAGAGGCGAAGGATGAACTCATCATGCGCCTGGCGCTGATGAAGCGC
AACGCCATGGCCGCCCCCTTCGAGAGAGCATTCGATGAATTCGCCAAGTT
AGCCGAAGAGGCTTCGAGATACACAAGCGAGACTGCGCCCCAGGGAGTTA
AGGAGGGAGGAGAGGTTATGGCCATTCACTATCGAGAGGAGGAAGCGATT
TATATCAAGGCCAGCCATGATCGTGTCACGGTGATCTTCAGCACAGTGTT
CCGGGAGGAGACAGATCGCATCTTTGGCAAGGTGTTCCTGCAGGAATTCG
TCGATGCCAGACGCCGTGTCCTCACCCTGCAAAATGCTCCCCAGGTACTC
TTCCGAAACGACTGTCCTCTGGAGCTGGCCGGTGTGCCTGGCCTTCAGAA
CGGTAATGACGGTAGAATCAGCTACGTCACTTTCGTCTTGTTCCCTCGTC
ACCTAACCCCCCAGAGACGCTATGAGAACATCTCCCACATCCAGATATTC
CGTGATTACTTCCATTACCACATCAAAGCATCCAAGGCATACATCCACAC
TAGGATGCGCAAGAGGACCGCAGACTTCCTTCAAGTTCTCAACCGGGCGC
GGCCCGAGAACGAGGAGCGAGAAAGGAAGACGGCCAGTGGCCGTACTTTC
AGGGTTCAGGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0030041actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARC2CBS51388_000439Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000439-T1CBS51388_000439-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000439-T1.exon1CBS51388_000439-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000439-T1.exon2CBS51388_000439-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000439-T1.exon3CBS51388_000439-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000439-T1.exon4CBS51388_000439-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000439-T1.exon5CBS51388_000439-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000439-T1.cdsCBS51388_000439-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
NoteBUSCO:EOG09263EQZ
DBxrefInterPro:IPR034666
DBxrefInterPro:IPR007188
DBxrefPFAM:PF04045
ProductARP2/3 actin-organizing complex subunit Arc34
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1308141..1309336 +
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