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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1350089..1351808+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000452-T1 ID=CBS51388_000452-T1|Name=CBS51388_000452-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1720bp|location=Sequence derived from alignment at An01:1350089..1351808+ (Aspergillus niger CBS 513.88)
ATGATTGACCGCTCAATAGACCCCGAAAAGAAAAAGTACTTCAAGATCCA
GGCCAATCACAAGGCTACCCCAGGATCGCAATATACCCAAGACTCTGTTA
AACGGAAGCGCGTAGATCAAGAGGTAGGTGGTCATGCCTTCCAGTTCTCT
TCGATCATACTGACTCTTTAAATAGAAGCACCAAAGGAAGATCCATCTGA
CGAAAAGGGCCACGAAAGAGAAAATCAAAAGGGCGGCTTTTCTGTCAAAC
CCTCTACTGGGAGTGCAGAGGGAGATCGGGTCTGAAGTTGTATCTTCCAG
CATCCGACAAGAACAGAGAAGCTTGATTTGCGCAAGCCAGCTTCGTCGAA
ACCAACTTCACCAATTCGAGCCCTGGCCTGATGAGTATACCATCAAGCAT
GTGCTGCGCAACAAGCGCTCAGGCATCTTGATAGCCAGTAAGCTTTCCCC
TACATCTAGACCATTCCATTGATGCAATCTAACAATCCTGAAGGTGGCCA
TCGTGGTGGTGAATCGTCTGTTTCGTAAGCTCAACCTTCCGTCCTGCGCG
GTCGTGTATCCGGCAAGCTAACCGCCGACCAAGGGTATGCTTCCCGGATT
GCGACCAAGATAAATGGACATATAACCGCACGATGGAGCGTGTTCTCTTC
AAAGAACCCTACAGAGTATATCTACCAGCTTCAGTCCCCTTCAAAAACAT
CCACACTAACTAGCTTCCCCACAGCTATCCTCAGTCTCACTAAGCCACAC
TGGCTACCTATTGTACGAATCAAAGACACCATCCTCCCCATCCTGTGATT
GCTAGCTAGCTGACAGGATCAGGGCGACGATGGATAGTGGTCCGAACGGC
GACTCCTTCCTGGCACCGCGAATGCTGCCCGATCCTGACGAAGGTGGAGA
TTACCGGTGGCCCACGTCGTGTACGTACCTACATAGCAAGCCCGCACTCT
CAGTCGTTACACACTTACCACAACGATCAAGCTTGCTAACCCCCGACCCT
ACTACTATGCAGTTTACCATCCCATCCGTCTCCGCACATCATCATCCCTA
TGGTGTTCATCCGCCTGCCCAACCGGCGAGATGCCGCTTTTCGCCGTCGG
AACCTCAGACGGACTATACACACTCGAGGGATTCGGCAGCTACTGGGCAT
TATCGAAGAAGTCCTTCCCGAACGATATACTAACAGGGAAACCAATCCTA
CATCGCCGGGTAGACTCTTCCCATGCTATCGTCTCAAGTGTCGAATGGCT
CTCATCCGACGTAATAGCCGCTGGTCTCAAAGACTCGGCTATATTCCTCC
ACGACTTGCGCAGCGGAGGCAGCGCAACCCGACTTCAACACCCCCACGCA
GTCACTAAGATGCGAAGAGTAGATCCCTACCGGATCGTCGTGGCGGGTAT
AAACTCGGTACGTGTTATGCCCTTCCCACTCACACACCGGCATATAGCCC
GACGAGGATCGTATCTGACAGAAATATTCGTTCAAACTATAACAGCTCCA
AATGTACGACATCAGATACCCGGCCAACGGCCTCCAACGCAATCCACAAC
CCAACAAAAAACATCACACGTCAACTAAACCATATCTTACATTTGCGGAC
TATTCGCCAGAAGGAATACCGGATTTCGACATCAGCTTGGAACTTGGCCT
CCTCGCTAGTGGTGTGTATCCCCTCTCCTACTTGACACTCTCTAGCTATT
CTACTTTGCAGAGTCGGTAA back to topCoding sequence (CDS) from alignment at An01:1350089..1351808+ >CBS51388_000452-T1 ID=CBS51388_000452-T1|Name=CBS51388_000452-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6804bp|location=Sequence derived from alignment at An01:1350089..1351808+ (Aspergillus niger CBS 513.88)
ATGATTGACCGCTCAATAGACCCCGAAAAGAAAAAGTACTTCAAGATCCA
GGCCAATCACAAGGCTACCCCAGGATCGCAATATACCCAAGACTCTGTTA
AACGGAAGCGCGTAGATCAAGAGAAGCACCAAAGGAAGATCCATCTGACG
AAAAGGGCCACGAAAGAGAAAATCAAAAGGGCGGCTTTTCTGTCAAACCC
TCTACTGGGAGTGCAGAGGGAGATCGGGTCTGAAGTTGTATCTTCCAGCA
TCCGACAAGAACAGAGAAGCTTGATTTGCGCAAGCCAGCTTCGTCGAAAC
CAACTTCACCAATTCGAGCCCTGGCCTGATGAGTATACCATCAAGCATGT
GCTGCGCAACAAGCGCTCAGGCATCTTGATAGCCAGTGGCCATCGTGGTG
GTGAATCGTCTGTTTCGGCGACGATGGATAGTGGTCCGAACGGCGACTCC
TTCCTGGCACCGCGAATGCTGCCCGATCCTGACGAAGGTGGAGATTACCG
GTGGCCCACGTCGTTTTACCATCCCATCCGTCTCCGCACATCATCATCCC
TATGGTGTTCATCCGCCTGCCCAACCGGCGAGATGCCGCTTTTCGCCGTC
GGAACCTCAGACGGACTATACACACTCGAGGGATTCGGCAGCTACTGGGC
ATTATCGAAGAAGTCCTTCCCGAACGATATACTAACAGGGAAACCAATCC
TACATCGCCGGGTAGACTCTTCCCATGCTATCGTCTCAAGTGTCGAATGG
CTCTCATCCGACGTAATAGCCGCTGGTCTCAAAGACTCGGCTATATTCCT
CCACGACTTGCGCAGCGGAGGCAGCGCAACCCGACTTCAACACCCCCACG
CAGTCACTAAGATGCGAAGAGTAGATCCCTACCGGATCGTCGTGGCGGGT
ATAAACTCGCTCCAAATGTACGACATCAGATACCCGGCCAACGGCCTCCA
ACGCAATCCACAACCCAACAAAAAACATCACACGTCAACTAAACCATATC
TTACATTTGCGGACTATTCGCCAGAAGGAATACCGGATTTCGACATCAGC
TTGGAACTTGGCCTCCTCGCTAGTGGTGTGTATCCCCTCTCCTACTTGAC
ACTCTCTAGCTATTCTACTTTGCAGAGTCGGTAAATGATTGACCGCTCAA
TAGACCCCGAAAAGAAAAAGTACTTCAAGATCCAGGCCAATCACAAGGCT
ACCCCAGGATCGCAATATACCCAAGACTCTGTTAAACGGAAGCGCGTAGA
TCAAGAGAAGCACCAAAGGAAGATCCATCTGACGAAAAGGGCCACGAAAG
AGAAAATCAAAAGGGCGGCTTTTCTGTCAAACCCTCTACTGGGAGTGCAG
AGGGAGATCGGGTCTGAAGTTGTATCTTCCAGCATCCGACAAGAACAGAG
AAGCTTGATTTGCGCAAGCCAGCTTCGTCGAAACCAACTTCACCAATTCG
AGCCCTGGCCTGATGAGTATACCATCAAGCATGTGCTGCGCAACAAGCGC
TCAGGCATCTTGATAGCCAGTGGCCATCGTGGTGGTGAATCGTCTGTTTC
GGCGACGATGGATAGTGGTCCGAACGGCGACTCCTTCCTGGCACCGCGAA
TGCTGCCCGATCCTGACGAAGGTGGAGATTACCGGTGGCCCACGTCGTTT
TACCATCCCATCCGTCTCCGCACATCATCATCCCTATGGTGTTCATCCGC
CTGCCCAACCGGCGAGATGCCGCTTTTCGCCGTCGGAACCTCAGACGGAC
TATACACACTCGAGGGATTCGGCAGCTACTGGGCATTATCGAAGAAGTCC
TTCCCGAACGATATACTAACAGGGAAACCAATCCTACATCGCCGGGTAGA
CTCTTCCCATGCTATCGTCTCAAGTGTCGAATGGCTCTCATCCGACGTAA
TAGCCGCTGGTCTCAAAGACTCGGCTATATTCCTCCACGACTTGCGCAGC
GGAGGCAGCGCAACCCGACTTCAACACCCCCACGCAGTCACTAAGATGCG
AAGAGTAGATCCCTACCGGATCGTCGTGGCGGGTATAAACTCGCTCCAAA
TGTACGACATCAGATACCCGGCCAACGGCCTCCAACGCAATCCACAACCC
AACAAAAAACATCACACGTCAACTAAACCATATCTTACATTTGCGGACTA
TTCGCCAGAAGGAATACCGGATTTCGACATCAGCTTGGAACTTGGCCTCC
TCGCTAGTGGTGTGTATCCCCTCTCCTACTTGACACTCTCTAGCTATTCT
ACTTTGCAGAGTCGGTAAATGATTGACCGCTCAATAGACCCCGAAAAGAA
AAAGTACTTCAAGATCCAGGCCAATCACAAGGCTACCCCAGGATCGCAAT
ATACCCAAGACTCTGTTAAACGGAAGCGCGTAGATCAAGAGAAGCACCAA
AGGAAGATCCATCTGACGAAAAGGGCCACGAAAGAGAAAATCAAAAGGGC
GGCTTTTCTGTCAAACCCTCTACTGGGAGTGCAGAGGGAGATCGGGTCTG
AAGTTGTATCTTCCAGCATCCGACAAGAACAGAGAAGCTTGATTTGCGCA
AGCCAGCTTCGTCGAAACCAACTTCACCAATTCGAGCCCTGGCCTGATGA
GTATACCATCAAGCATGTGCTGCGCAACAAGCGCTCAGGCATCTTGATAG
CCAGTGGCCATCGTGGTGGTGAATCGTCTGTTTCGGCGACGATGGATAGT
GGTCCGAACGGCGACTCCTTCCTGGCACCGCGAATGCTGCCCGATCCTGA
CGAAGGTGGAGATTACCGGTGGCCCACGTCGTTTTACCATCCCATCCGTC
TCCGCACATCATCATCCCTATGGTGTTCATCCGCCTGCCCAACCGGCGAG
ATGCCGCTTTTCGCCGTCGGAACCTCAGACGGACTATACACACTCGAGGG
ATTCGGCAGCTACTGGGCATTATCGAAGAAGTCCTTCCCGAACGATATAC
TAACAGGGAAACCAATCCTACATCGCCGGGTAGACTCTTCCCATGCTATC
GTCTCAAGTGTCGAATGGCTCTCATCCGACGTAATAGCCGCTGGTCTCAA
AGACTCGGCTATATTCCTCCACGACTTGCGCAGCGGAGGCAGCGCAACCC
GACTTCAACACCCCCACGCAGTCACTAAGATGCGAAGAGTAGATCCCTAC
CGGATCGTCGTGGCGGGTATAAACTCGCTCCAAATGTACGACATCAGATA
CCCGGCCAACGGCCTCCAACGCAATCCACAACCCAACAAAAAACATCACA
CGTCAACTAAACCATATCTTACATTTGCGGACTATTCGCCAGAAGGAATA
CCGGATTTCGACATCAGCTTGGAACTTGGCCTCCTCGCTAGTGGTGTGTA
TCCCCTCTCCTACTTGACACTCTCTAGCTATTCTACTTTGCAGAGTCGGT
AAATGATTGACCGCTCAATAGACCCCGAAAAGAAAAAGTACTTCAAGATC
CAGGCCAATCACAAGGCTACCCCAGGATCGCAATATACCCAAGACTCTGT
TAAACGGAAGCGCGTAGATCAAGAGAAGCACCAAAGGAAGATCCATCTGA
CGAAAAGGGCCACGAAAGAGAAAATCAAAAGGGCGGCTTTTCTGTCAAAC
CCTCTACTGGGAGTGCAGAGGGAGATCGGGTCTGAAGTTGTATCTTCCAG
CATCCGACAAGAACAGAGAAGCTTGATTTGCGCAAGCCAGCTTCGTCGAA
ACCAACTTCACCAATTCGAGCCCTGGCCTGATGAGTATACCATCAAGCAT
GTGCTGCGCAACAAGCGCTCAGGCATCTTGATAGCCAGTGGCCATCGTGG
TGGTGAATCGTCTGTTTCGGCGACGATGGATAGTGGTCCGAACGGCGACT
CCTTCCTGGCACCGCGAATGCTGCCCGATCCTGACGAAGGTGGAGATTAC
CGGTGGCCCACGTCGTTTTACCATCCCATCCGTCTCCGCACATCATCATC
CCTATGGTGTTCATCCGCCTGCCCAACCGGCGAGATGCCGCTTTTCGCCG
TCGGAACCTCAGACGGACTATACACACTCGAGGGATTCGGCAGCTACTGG
GCATTATCGAAGAAGTCCTTCCCGAACGATATACTAACAGGGAAACCAAT
CCTACATCGCCGGGTAGACTCTTCCCATGCTATCGTCTCAAGTGTCGAAT
GGCTCTCATCCGACGTAATAGCCGCTGGTCTCAAAGACTCGGCTATATTC
CTCCACGACTTGCGCAGCGGAGGCAGCGCAACCCGACTTCAACACCCCCA
CGCAGTCACTAAGATGCGAAGAGTAGATCCCTACCGGATCGTCGTGGCGG
GTATAAACTCGCTCCAAATGTACGACATCAGATACCCGGCCAACGGCCTC
CAACGCAATCCACAACCCAACAAAAAACATCACACGTCAACTAAACCATA
TCTTACATTTGCGGACTATTCGCCAGAAGGAATACCGGATTTCGACATCA
GCTTGGAACTTGGCCTCCTCGCTAGTGGTGTGTATCCCCTCTCCTACTTG
ACACTCTCTAGCTATTCTACTTTGCAGAGTCGGTAAATGATTGACCGCTC
AATAGACCCCGAAAAGAAAAAGTACTTCAAGATCCAGGCCAATCACAAGG
CTACCCCAGGATCGCAATATACCCAAGACTCTGTTAAACGGAAGCGCGTA
GATCAAGAGAAGCACCAAAGGAAGATCCATCTGACGAAAAGGGCCACGAA
AGAGAAAATCAAAAGGGCGGCTTTTCTGTCAAACCCTCTACTGGGAGTGC
AGAGGGAGATCGGGTCTGAAGTTGTATCTTCCAGCATCCGACAAGAACAG
AGAAGCTTGATTTGCGCAAGCCAGCTTCGTCGAAACCAACTTCACCAATT
CGAGCCCTGGCCTGATGAGTATACCATCAAGCATGTGCTGCGCAACAAGC
GCTCAGGCATCTTGATAGCCAGTGGCCATCGTGGTGGTGAATCGTCTGTT
TCGGCGACGATGGATAGTGGTCCGAACGGCGACTCCTTCCTGGCACCGCG
AATGCTGCCCGATCCTGACGAAGGTGGAGATTACCGGTGGCCCACGTCGT
TTTACCATCCCATCCGTCTCCGCACATCATCATCCCTATGGTGTTCATCC
GCCTGCCCAACCGGCGAGATGCCGCTTTTCGCCGTCGGAACCTCAGACGG
ACTATACACACTCGAGGGATTCGGCAGCTACTGGGCATTATCGAAGAAGT
CCTTCCCGAACGATATACTAACAGGGAAACCAATCCTACATCGCCGGGTA
GACTCTTCCCATGCTATCGTCTCAAGTGTCGAATGGCTCTCATCCGACGT
AATAGCCGCTGGTCTCAAAGACTCGGCTATATTCCTCCACGACTTGCGCA
GCGGAGGCAGCGCAACCCGACTTCAACACCCCCACGCAGTCACTAAGATG
CGAAGAGTAGATCCCTACCGGATCGTCGTGGCGGGTATAAACTCGCTCCA
AATGTACGACATCAGATACCCGGCCAACGGCCTCCAACGCAATCCACAAC
CCAACAAAAAACATCACACGTCAACTAAACCATATCTTACATTTGCGGAC
TATTCGCCAGAAGGAATACCGGATTTCGACATCAGCTTGGAACTTGGCCT
CCTCGCTAGTGGTGTGTATCCCCTCTCCTACTTGACACTCTCTAGCTATT
CTACTTTGCAGAGTCGGTAAATGATTGACCGCTCAATAGACCCCGAAAAG
AAAAAGTACTTCAAGATCCAGGCCAATCACAAGGCTACCCCAGGATCGCA
ATATACCCAAGACTCTGTTAAACGGAAGCGCGTAGATCAAGAGAAGCACC
AAAGGAAGATCCATCTGACGAAAAGGGCCACGAAAGAGAAAATCAAAAGG
GCGGCTTTTCTGTCAAACCCTCTACTGGGAGTGCAGAGGGAGATCGGGTC
TGAAGTTGTATCTTCCAGCATCCGACAAGAACAGAGAAGCTTGATTTGCG
CAAGCCAGCTTCGTCGAAACCAACTTCACCAATTCGAGCCCTGGCCTGAT
GAGTATACCATCAAGCATGTGCTGCGCAACAAGCGCTCAGGCATCTTGAT
AGCCAGTGGCCATCGTGGTGGTGAATCGTCTGTTTCGGCGACGATGGATA
GTGGTCCGAACGGCGACTCCTTCCTGGCACCGCGAATGCTGCCCGATCCT
GACGAAGGTGGAGATTACCGGTGGCCCACGTCGTTTTACCATCCCATCCG
TCTCCGCACATCATCATCCCTATGGTGTTCATCCGCCTGCCCAACCGGCG
AGATGCCGCTTTTCGCCGTCGGAACCTCAGACGGACTATACACACTCGAG
GGATTCGGCAGCTACTGGGCATTATCGAAGAAGTCCTTCCCGAACGATAT
ACTAACAGGGAAACCAATCCTACATCGCCGGGTAGACTCTTCCCATGCTA
TCGTCTCAAGTGTCGAATGGCTCTCATCCGACGTAATAGCCGCTGGTCTC
AAAGACTCGGCTATATTCCTCCACGACTTGCGCAGCGGAGGCAGCGCAAC
CCGACTTCAACACCCCCACGCAGTCACTAAGATGCGAAGAGTAGATCCCT
ACCGGATCGTCGTGGCGGGTATAAACTCGCTCCAAATGTACGACATCAGA
TACCCGGCCAACGGCCTCCAACGCAATCCACAACCCAACAAAAAACATCA
CACGTCAACTAAACCATATCTTACATTTGCGGACTATTCGCCAGAAGGAA
TACCGGATTTCGACATCAGCTTGGAACTTGGCCTCCTCGCTAGTGGTGTG
TATCCCCTCTCCTACTTGACACTCTCTAGCTATTCTACTTTGCAGAGTCG
GTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1350089..1351808 + |
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