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CBS51388_000477-T1, CBS51388_000477-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000477-T1
Unique NameCBS51388_000477-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1424172..1425179+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000477-T1 ID=CBS51388_000477-T1|Name=CBS51388_000477-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1008bp|location=Sequence derived from alignment at An01:1424172..1425179+ (Aspergillus niger CBS 513.88)
ATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATCCTAACGTT
GGTTGGCGCCTCTACTCCTAGTTCCCACCATTTCAGTAACTCATTCTTTG
TATTAGAACCCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGA
GTATCTCCCATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTA
AAGCAGTTGACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCT
TATTGCTGTCCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGT
CGGCATTCAAACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCC
TTCAATGAGCCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAG
TCGGACCATTGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGT
TTACCCAGATTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAG
GTTTGTCACGATGCTTTTTACACTCATGATGCATTCTTCAGGAGCTAACA
ACTTCGTCCCCAGGGTCGGATACCTGATATAACTCTATCATGTATCCAAT
ATCTCCGTCAACAGTACCCATCCGCGACTATCAGCGTCGAGGTTGAGAAG
CCTGGGCGTGAGGGTCTGCAAAACCTCGCAGCGGAAGCCGACATCGTGTT
CTACTCGAAGAGCTGGGCTCAAGTAAGGGTTACTTGGGCAATCTACATCG
TGTATCTCTCTGACCACTGACTTGCAGGGCAACGGATACCAAACTGCTGA
AGAGTGTGTTCAGAAAGAATCCACACTAACACGAAAAGCGTATGGTCCTT
GCTGTATCCTACACGTTGAATCTATGAGTGCTGATTTTACCAGGTCGTTG
CTGTGCTGCACTTGGGGTCAAGGAGGTGCAGTGGCCTTTGAGACCAAGAC
ACAGAGTCTGGTTCATAGTCCTGCATACTCTGCAGCAAACTTTCGAGTCA
TCGAGTAA
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Coding sequence (CDS) from alignment at An01:1424172..1425179+

>CBS51388_000477-T1 ID=CBS51388_000477-T1|Name=CBS51388_000477-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3885bp|location=Sequence derived from alignment at An01:1424172..1425179+ (Aspergillus niger CBS 513.88)
ATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATCCTAACAAC
CCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGAGTATCTCCC
ATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTAAAGCAGTTG
ACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCTTATTGCTGT
CCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGTCGGCATTCA
AACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCCTTCAATGAG
CCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAGTCGGACCAT
TGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGTTTACCCAGA
TTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAGGGTCGGATA
CCTGATATAACTCTATCATGTATCCAATATCTCCGTCAACAGTACCCATC
CGCGACTATCAGCGTCGAGGTTGAGAAGCCTGGGCGTGAGGGTCTGCAAA
ACCTCGCAGCGGAAGCCGACATCGTGTTCTACTCGAAGAGCTGGGCTCAA
GGCAACGGATACCAAACTGCTGAAGAGTGTGTTCAGAAAGAATCCACACT
AACACGAAAAGCGTCGTTGCTGTGCTGCACTTGGGGTCAAGGAGGTGCAG
TGGCCTTTGAGACCAAGACACAGAGTCTGGTTCATAGTCCTGCATACTCT
GCAGCAAACTTTCGAGTCATCGAGTAAATGTCATTGGTCGCAATAGGTGC
ATGCTATCTGGATACAATCCTAACAACCCCCCACTACCCAGGAGAAGATG
AGAAGCTACGGGCTTCGAGTATCTCCCATCGACGGGGAGGTAATTGCCCA
AACTCTCTGGAAGTTCTAAAGCAGTTGACAACGAACAGTCCGTCAACTGC
CAATGTCTCCCTGAACCTTATTGCTGTCCTACCTGCGAAGACATCTACTG
CTTCCCAGGAGATCCAGTCGGCATTCAAACCGCACGTTAACCTATCTCAT
TGTATCTTTCGAGAGGCCTTCAATGAGCCCGCCTCAAGCTACATCATTAA
AAGCGAATCGTCTGGCAGTCGGACCATTGTCAACTACAATGAACTGCCTG
AGATCACGGTAGACGAGTTTACCCAGATTGCAGGCAATCTCACCAACCCA
TCCTGGTTCCACTTTGAGGGTCGGATACCTGATATAACTCTATCATGTAT
CCAATATCTCCGTCAACAGTACCCATCCGCGACTATCAGCGTCGAGGTTG
AGAAGCCTGGGCGTGAGGGTCTGCAAAACCTCGCAGCGGAAGCCGACATC
GTGTTCTACTCGAAGAGCTGGGCTCAAGGCAACGGATACCAAACTGCTGA
AGAGTGTGTTCAGAAAGAATCCACACTAACACGAAAAGCGTCGTTGCTGT
GCTGCACTTGGGGTCAAGGAGGTGCAGTGGCCTTTGAGACCAAGACACAG
AGTCTGGTTCATAGTCCTGCATACTCTGCAGCAAACTTTCGAGTCATCGA
GTAAATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATCCTAA
CAACCCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGAGTATC
TCCCATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTAAAGCA
GTTGACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCTTATTG
CTGTCCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGTCGGCA
TTCAAACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCCTTCAA
TGAGCCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAGTCGGA
CCATTGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGTTTACC
CAGATTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAGGGTCG
GATACCTGATATAACTCTATCATGTATCCAATATCTCCGTCAACAGTACC
CATCCGCGACTATCAGCGTCGAGGTTGAGAAGCCTGGGCGTGAGGGTCTG
CAAAACCTCGCAGCGGAAGCCGACATCGTGTTCTACTCGAAGAGCTGGGC
TCAAGGCAACGGATACCAAACTGCTGAAGAGTGTGTTCAGAAAGAATCCA
CACTAACACGAAAAGCGTCGTTGCTGTGCTGCACTTGGGGTCAAGGAGGT
GCAGTGGCCTTTGAGACCAAGACACAGAGTCTGGTTCATAGTCCTGCATA
CTCTGCAGCAAACTTTCGAGTCATCGAGTAAATGTCATTGGTCGCAATAG
GTGCATGCTATCTGGATACAATCCTAACAACCCCCCACTACCCAGGAGAA
GATGAGAAGCTACGGGCTTCGAGTATCTCCCATCGACGGGGAGGTAATTG
CCCAAACTCTCTGGAAGTTCTAAAGCAGTTGACAACGAACAGTCCGTCAA
CTGCCAATGTCTCCCTGAACCTTATTGCTGTCCTACCTGCGAAGACATCT
ACTGCTTCCCAGGAGATCCAGTCGGCATTCAAACCGCACGTTAACCTATC
TCATTGTATCTTTCGAGAGGCCTTCAATGAGCCCGCCTCAAGCTACATCA
TTAAAAGCGAATCGTCTGGCAGTCGGACCATTGTCAACTACAATGAACTG
CCTGAGATCACGGTAGACGAGTTTACCCAGATTGCAGGCAATCTCACCAA
CCCATCCTGGTTCCACTTTGAGGGTCGGATACCTGATATAACTCTATCAT
GTATCCAATATCTCCGTCAACAGTACCCATCCGCGACTATCAGCGTCGAG
GTTGAGAAGCCTGGGCGTGAGGGTCTGCAAAACCTCGCAGCGGAAGCCGA
CATCGTGTTCTACTCGAAGAGCTGGGCTCAAGGCAACGGATACCAAACTG
CTGAAGAGTGTGTTCAGAAAGAATCCACACTAACACGAAAAGCGTCGTTG
CTGTGCTGCACTTGGGGTCAAGGAGGTGCAGTGGCCTTTGAGACCAAGAC
ACAGAGTCTGGTTCATAGTCCTGCATACTCTGCAGCAAACTTTCGAGTCA
TCGAGTAAATGTCATTGGTCGCAATAGGTGCATGCTATCTGGATACAATC
CTAACAACCCCCCACTACCCAGGAGAAGATGAGAAGCTACGGGCTTCGAG
TATCTCCCATCGACGGGGAGGTAATTGCCCAAACTCTCTGGAAGTTCTAA
AGCAGTTGACAACGAACAGTCCGTCAACTGCCAATGTCTCCCTGAACCTT
ATTGCTGTCCTACCTGCGAAGACATCTACTGCTTCCCAGGAGATCCAGTC
GGCATTCAAACCGCACGTTAACCTATCTCATTGTATCTTTCGAGAGGCCT
TCAATGAGCCCGCCTCAAGCTACATCATTAAAAGCGAATCGTCTGGCAGT
CGGACCATTGTCAACTACAATGAACTGCCTGAGATCACGGTAGACGAGTT
TACCCAGATTGCAGGCAATCTCACCAACCCATCCTGGTTCCACTTTGAGG
GTCGGATACCTGATATAACTCTATCATGTATCCAATATCTCCGTCAACAG
TACCCATCCGCGACTATCAGCGTCGAGGTTGAGAAGCCTGGGCGTGAGGG
TCTGCAAAACCTCGCAGCGGAAGCCGACATCGTGTTCTACTCGAAGAGCT
GGGCTCAAGGCAACGGATACCAAACTGCTGAAGAGTGTGTTCAGAAAGAA
TCCACACTAACACGAAAAGCGTCGTTGCTGTGCTGCACTTGGGGTCAAGG
AGGTGCAGTGGCCTTTGAGACCAAGACACAGAGTCTGGTTCATAGTCCTG
CATACTCTGCAGCAAACTTTCGAGTCATCGAGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000477CBS51388_000477Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000477-T1CBS51388_000477-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000477-T1.exon1CBS51388_000477-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000477-T1.exon2CBS51388_000477-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000477-T1.exon3CBS51388_000477-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000477-T1.exon4CBS51388_000477-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000477-T1.exon5CBS51388_000477-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000477-T1.cdsCBS51388_000477-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
DBxrefInterPro:IPR029056
DBxrefInterPro:IPR011611
DBxrefPFAM:PF00294
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1424172..1425179 +
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