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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1430819..1431762- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000480-T1 ID=CBS51388_000480-T1|Name=CBS51388_000480-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=944bp|location=Sequence derived from alignment at An01:1430819..1431762- (Aspergillus niger CBS 513.88)
ATGGCTAACGACGAGTACGATGTGAGTATCCTCTTTCTCTCATTCGCACC
CCTTGCCAAGCAACGGTATAACTAACGGGCTACTTGGTAGTTTCTCTTCA
AAGGTAAAGTTGCCACTTCCCGTCTCCGCACAGTCGCCGCTCGATCCCAT
CGCCTCTATTGTCGGCCGCATTTTCGCGATACACGGCTAACCAACGACGA
TTGTACTTAACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAA
CCTTTTGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCA
CCATCGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACG
ATCAAGGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCAT
CACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATA
TCAGTAAGCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTC
CGCGATCATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAG
TGATTTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCG
CAAGTATGTTGGAACCTTCGCTGGCTTAGGATGAAATGTGCTGGCGTGCT
AACGTGCTACCAGGCGAGAACAACCTCTCTTTCATCGAGACATCTGCCCT
TGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCTGACAGGTTAGA
CTTGCCCCCGGTCCTCAGTTTACCAGACGAATTCCGTCATGCTGACGTTC
TTGTCACCTTTAGAAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGG
CGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGA
TCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGTTAA back to topCoding sequence (CDS) from alignment at An01:1430819..1431762- >CBS51388_000480-T1 ID=CBS51388_000480-T1|Name=CBS51388_000480-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3180bp|location=Sequence derived from alignment at An01:1430819..1431762- (Aspergillus niger CBS 513.88)
AAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGC
CAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGATCGACGAGTCGGA
GGACCCGAAGACCAAGCAGGGATGCTGTTAAGCGAGAACAACCTCTCTTT
CATCGAGACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGA
ACATCCTGACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAAC
CTTTTGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCAC
CATCGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGA
TCAAGGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATC
ACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATAT
CAGTAAGCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCC
GCGATCATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGT
GATTTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGC
AATTTCTCTTCAAAGATGGCTAACGACGAGTACGATAAATCTACCGTATC
GTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGG
CGACCGCCGCGACATGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCA
AGCAGGGATGCTGTTAAGCGAGAACAACCTCTCTTTCATCGAGACATCTG
CCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCCTGACAGTT
GTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCGTTT
CACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATCGGTGTCGAGT
TCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGGCTCAGATT
TGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCCGCTTACTA
TCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAAGCACCAGA
CTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATCATGCCGAC
TCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTGAGGCACCT
GCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAATTTCTCTTCAAA
GATGGCTAACGACGAGTACGATAAATCTACCGTATCGTCTCCAGCAAGGC
TCTGGATGGCGGTGATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACA
TGGTGCGGATCGACGAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGT
TAAGCGAGAACAACCTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGC
AACGTCGAGCTTGCTTTCCAGAACATCCTGACAGTTGTCCTGATTGGAGA
CTCTGGTGTTGGAAAGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGT
TCAACCTGGACTCCAAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCG
ATCCAGGTCGATTCCAAGACGATCAAGGCTCAGATTTGGGATACTGCTGG
TCAGGAACGTTACCGTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCG
GTGCTCTTCTCGTCTACGATATCAGTAAGCACCAGACTTACGACAATGTC
AACCGGTGGTTGAAGGAACTCCGCGATCATGCCGACTCCAACATCGTTAT
CATGTTGGTCGGTAACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCA
CGGAAGAGGCCAAGCAATTCGCAATTTCTCTTCAAAGATGGCTAACGACG
AGTACGATAAATCTACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTG
ATGCCGGCCAGACCGTTCTGGGCGACCGCCGCGACATGGTGCGGATCGAC
GAGTCGGAGGACCCGAAGACCAAGCAGGGATGCTGTTAAGCGAGAACAAC
CTCTCTTTCATCGAGACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGC
TTTCCAGAACATCCTGACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAA
AGTCCAACCTTTTGAGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCC
AAGTCCACCATCGGTGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTC
CAAGACGATCAAGGCTCAGATTTGGGATACTGCTGGTCAGGAACGTTACC
GTGCCATCACCTCCGCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTC
TACGATATCAGTAAGCACCAGACTTACGACAATGTCAACCGGTGGTTGAA
GGAACTCCGCGATCATGCCGACTCCAACATCGTTATCATGTTGGTCGGTA
ACAAGAGTGATTTGAGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAG
CAATTCGCAATTTCTCTTCAAAGATGGCTAACGACGAGTACGATAAATCT
ACCGTATCGTCTCCAGCAAGGCTCTGGATGGCGGTGATGCCGGCCAGACC
GTTCTGGGCGACCGCCGCGACATGGTGCGGATCGACGAGTCGGAGGACCC
GAAGACCAAGCAGGGATGCTGTTAAGCGAGAACAACCTCTCTTTCATCGA
GACATCTGCCCTTGACGCCAGCAACGTCGAGCTTGCTTTCCAGAACATCC
TGACAGTTGTCCTGATTGGAGACTCTGGTGTTGGAAAGTCCAACCTTTTG
AGTCGTTTCACCCGTAACGAGTTCAACCTGGACTCCAAGTCCACCATCGG
TGTCGAGTTCGCTACCCGCTCGATCCAGGTCGATTCCAAGACGATCAAGG
CTCAGATTTGGGATACTGCTGGTCAGGAACGTTACCGTGCCATCACCTCC
GCTTACTATCGGGGTGCTGTCGGTGCTCTTCTCGTCTACGATATCAGTAA
GCACCAGACTTACGACAATGTCAACCGGTGGTTGAAGGAACTCCGCGATC
ATGCCGACTCCAACATCGTTATCATGTTGGTCGGTAACAAGAGTGATTTG
AGGCACCTGCGGGCTGTGCCCACGGAAGAGGCCAAGCAATTCGCAATTTC
TCTTCAAAGATGGCTAACGACGAGTACGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264HHW |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR001806 |
| DBxref | InterPro:IPR005225 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF00025 |
| Product | Ras- protein Rab-11A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1430819..1431762 - |
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