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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1462326..1463666- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000490-T1 ID=CBS51388_000490-T1|Name=CBS51388_000490-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1341bp|location=Sequence derived from alignment at An01:1462326..1463666- (Aspergillus niger CBS 513.88)
ATGCTGGCACGTACTGTTTTGCGCAGCGTGCCCTTCCGGGGCGTCGCACG
CCAGTCCTTGAACAAGACCTCCACGGTACGAACTTCCCCGACATCGACCG
TCCATTGGATCCAATGGACGAGGACAATCGCTTCCCTATGGCTCAGGAAA
GCTTCTGTATCGGTTTTTGACTAACGAACCACCCAGCGTGCGTCTTCCTC
CGCCGCCGGTGCCGAATCCGCCAGCTCCCCCTTCCACCTCACACTCACTG
CGTCCGCCGCAACCGCCGTCGCTCTCGGATCCGCCGCGTATCTCTATGGC
CAGGAGGCTTTTGCGATGACACCTGCTGAGGAGGGGTGAGTGGATTATCG
GGTGATGCTCAAGGGAATGGTCAACGTGTAGCTGGCTGCTCCGTTGCTCC
GACCGAGGCATCACCTTCCCAGTCCCGACTGTTTGACACCCAGACTGACA
CACATCGATTTCAAGATTGCACCCTACCGCGTACCCTTGGGAGCACGCCA
AGTGGAACAAGACCTTCGATCACCAGGCGTGAGTCTTCCAATTTCGGGCG
AATACTACCCTCGCCATCTTTCCCCGATACCGGCCATCTTACTCATGTTT
TGCACTCCAGCCTCCGTCGTGGTTTCCAGGTCTACCGTGAAGTCTGTGCC
AGCTGCCACTCCCTGACCCGTGTGCCTTGGCGCTCGTTCGTCGGTGTCAT
GCACACCGTCGATGAGATGAAGGCCATGGCTGAGGAGAACGAGTACGACA
CCGAGCCCAACGACCAGGGCGAGATCGAGAAGCGTCCCGGAAAGCTGTCC
GACTACATCCCTGCTCCCTACAAGAACGAGGAGGCTGCTCGTGCTGCCAA
CGGTGGTGCTCTCCCCCCGGATCTCAGCTTGATCGTCAAGGGCCGTCACG
GTGGCTGCAACTACATCTTCAGTCTGCTGACTGGTTACCCCGATGAGCCC
CCGGCTGGTGCCACCGTCGGTGCTGGCATGAACTTCAACCCCTACTTCCC
CGGTACCGGTATGTCACCACTTACATATTACACCTGACAATTGATTCGTC
TATGCTCAATTCTAACAATATCTAGCCATTGCCATGGGTCGTGTTCTCTT
CGATGGTGTTGTTGAGTACGAGGATGGCACCCCCGCCACCACCTCCCAGA
TGGCCAAGGACGTCGTCGAGTTCCTCAACTGGGCTGCCGAGCCTGAGATG
GACGACCGCAAGAAGATGGGTGTCAAGGCTATCACCCTCCTGACCGGTCT
CTTCGCCATCAGCGTCTGGGTCAAGCGTTACAAGTGGTCCCCGATCAAGA
CGAGAAAGATTGTGTACAGCCCCCCCGTTTCCCGGCGCTGA back to topCoding sequence (CDS) from alignment at An01:1462326..1463666- >CBS51388_000490-T1 ID=CBS51388_000490-T1|Name=CBS51388_000490-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4755bp|location=Sequence derived from alignment at An01:1462326..1463666- (Aspergillus niger CBS 513.88)
CCATTGCCATGGGTCGTGTTCTCTTCGATGGTGTTGTTGAGTACGAGGAT
GGCACCCCCGCCACCACCTCCCAGATGGCCAAGGACGTCGTCGAGTTCCT
CAACTGGGCTGCCGAGCCTGAGATGGACGACCGCAAGAAGATGGGTGTCA
AGGCTATCACCCTCCTGACCGGTCTCTTCGCCATCAGCGTCTGGGTCAAG
CGTTACAAGTGGTCCCCGATCAAGACGAGAAAGATTGTGTACAGCCCCCC
CGTTTCCCGGCGCTGACCTCCGTCGTGGTTTCCAGGTCTACCGTGAAGTC
TGTGCCAGCTGCCACTCCCTGACCCGTGTGCCTTGGCGCTCGTTCGTCGG
TGTCATGCACACCGTCGATGAGATGAAGGCCATGGCTGAGGAGAACGAGT
ACGACACCGAGCCCAACGACCAGGGCGAGATCGAGAAGCGTCCCGGAAAG
CTGTCCGACTACATCCCTGCTCCCTACAAGAACGAGGAGGCTGCTCGTGC
TGCCAACGGTGGTGCTCTCCCCCCGGATCTCAGCTTGATCGTCAAGGGCC
GTCACGGTGGCTGCAACTACATCTTCAGTCTGCTGACTGGTTACCCCGAT
GAGCCCCCGGCTGGTGCCACCGTCGGTGCTGGCATGAACTTCAACCCCTA
CTTCCCCGGTACCGATTGCACCCTACCGCGTACCCTTGGGAGCACGCCAA
GTGGAACAAGACCTTCGATCACCAGGCCGTGCGTCTTCCTCCGCCGCCGG
TGCCGAATCCGCCAGCTCCCCCTTCCACCTCACACTCACTGCGTCCGCCG
CAACCGCCGTCGCTCTCGGATCCGCCGCGTATCTCTATGGCCAGGAGGCT
TTTGCGATGACACCTGCTGAGGAGGGATGCTGGCACGTACTGTTTTGCGC
AGCGTGCCCTTCCGGGGCGTCGCACGCCAGTCCTTGAACAAGACCTCCAC
GCCATTGCCATGGGTCGTGTTCTCTTCGATGGTGTTGTTGAGTACGAGGA
TGGCACCCCCGCCACCACCTCCCAGATGGCCAAGGACGTCGTCGAGTTCC
TCAACTGGGCTGCCGAGCCTGAGATGGACGACCGCAAGAAGATGGGTGTC
AAGGCTATCACCCTCCTGACCGGTCTCTTCGCCATCAGCGTCTGGGTCAA
GCGTTACAAGTGGTCCCCGATCAAGACGAGAAAGATTGTGTACAGCCCCC
CCGTTTCCCGGCGCTGACCTCCGTCGTGGTTTCCAGGTCTACCGTGAAGT
CTGTGCCAGCTGCCACTCCCTGACCCGTGTGCCTTGGCGCTCGTTCGTCG
GTGTCATGCACACCGTCGATGAGATGAAGGCCATGGCTGAGGAGAACGAG
TACGACACCGAGCCCAACGACCAGGGCGAGATCGAGAAGCGTCCCGGAAA
GCTGTCCGACTACATCCCTGCTCCCTACAAGAACGAGGAGGCTGCTCGTG
CTGCCAACGGTGGTGCTCTCCCCCCGGATCTCAGCTTGATCGTCAAGGGC
CGTCACGGTGGCTGCAACTACATCTTCAGTCTGCTGACTGGTTACCCCGA
TGAGCCCCCGGCTGGTGCCACCGTCGGTGCTGGCATGAACTTCAACCCCT
ACTTCCCCGGTACCGATTGCACCCTACCGCGTACCCTTGGGAGCACGCCA
AGTGGAACAAGACCTTCGATCACCAGGCCGTGCGTCTTCCTCCGCCGCCG
GTGCCGAATCCGCCAGCTCCCCCTTCCACCTCACACTCACTGCGTCCGCC
GCAACCGCCGTCGCTCTCGGATCCGCCGCGTATCTCTATGGCCAGGAGGC
TTTTGCGATGACACCTGCTGAGGAGGGATGCTGGCACGTACTGTTTTGCG
CAGCGTGCCCTTCCGGGGCGTCGCACGCCAGTCCTTGAACAAGACCTCCA
CGCCATTGCCATGGGTCGTGTTCTCTTCGATGGTGTTGTTGAGTACGAGG
ATGGCACCCCCGCCACCACCTCCCAGATGGCCAAGGACGTCGTCGAGTTC
CTCAACTGGGCTGCCGAGCCTGAGATGGACGACCGCAAGAAGATGGGTGT
CAAGGCTATCACCCTCCTGACCGGTCTCTTCGCCATCAGCGTCTGGGTCA
AGCGTTACAAGTGGTCCCCGATCAAGACGAGAAAGATTGTGTACAGCCCC
CCCGTTTCCCGGCGCTGACCTCCGTCGTGGTTTCCAGGTCTACCGTGAAG
TCTGTGCCAGCTGCCACTCCCTGACCCGTGTGCCTTGGCGCTCGTTCGTC
GGTGTCATGCACACCGTCGATGAGATGAAGGCCATGGCTGAGGAGAACGA
GTACGACACCGAGCCCAACGACCAGGGCGAGATCGAGAAGCGTCCCGGAA
AGCTGTCCGACTACATCCCTGCTCCCTACAAGAACGAGGAGGCTGCTCGT
GCTGCCAACGGTGGTGCTCTCCCCCCGGATCTCAGCTTGATCGTCAAGGG
CCGTCACGGTGGCTGCAACTACATCTTCAGTCTGCTGACTGGTTACCCCG
ATGAGCCCCCGGCTGGTGCCACCGTCGGTGCTGGCATGAACTTCAACCCC
TACTTCCCCGGTACCGATTGCACCCTACCGCGTACCCTTGGGAGCACGCC
AAGTGGAACAAGACCTTCGATCACCAGGCCGTGCGTCTTCCTCCGCCGCC
GGTGCCGAATCCGCCAGCTCCCCCTTCCACCTCACACTCACTGCGTCCGC
CGCAACCGCCGTCGCTCTCGGATCCGCCGCGTATCTCTATGGCCAGGAGG
CTTTTGCGATGACACCTGCTGAGGAGGGATGCTGGCACGTACTGTTTTGC
GCAGCGTGCCCTTCCGGGGCGTCGCACGCCAGTCCTTGAACAAGACCTCC
ACGCCATTGCCATGGGTCGTGTTCTCTTCGATGGTGTTGTTGAGTACGAG
GATGGCACCCCCGCCACCACCTCCCAGATGGCCAAGGACGTCGTCGAGTT
CCTCAACTGGGCTGCCGAGCCTGAGATGGACGACCGCAAGAAGATGGGTG
TCAAGGCTATCACCCTCCTGACCGGTCTCTTCGCCATCAGCGTCTGGGTC
AAGCGTTACAAGTGGTCCCCGATCAAGACGAGAAAGATTGTGTACAGCCC
CCCCGTTTCCCGGCGCTGACCTCCGTCGTGGTTTCCAGGTCTACCGTGAA
GTCTGTGCCAGCTGCCACTCCCTGACCCGTGTGCCTTGGCGCTCGTTCGT
CGGTGTCATGCACACCGTCGATGAGATGAAGGCCATGGCTGAGGAGAACG
AGTACGACACCGAGCCCAACGACCAGGGCGAGATCGAGAAGCGTCCCGGA
AAGCTGTCCGACTACATCCCTGCTCCCTACAAGAACGAGGAGGCTGCTCG
TGCTGCCAACGGTGGTGCTCTCCCCCCGGATCTCAGCTTGATCGTCAAGG
GCCGTCACGGTGGCTGCAACTACATCTTCAGTCTGCTGACTGGTTACCCC
GATGAGCCCCCGGCTGGTGCCACCGTCGGTGCTGGCATGAACTTCAACCC
CTACTTCCCCGGTACCGATTGCACCCTACCGCGTACCCTTGGGAGCACGC
CAAGTGGAACAAGACCTTCGATCACCAGGCCGTGCGTCTTCCTCCGCCGC
CGGTGCCGAATCCGCCAGCTCCCCCTTCCACCTCACACTCACTGCGTCCG
CCGCAACCGCCGTCGCTCTCGGATCCGCCGCGTATCTCTATGGCCAGGAG
GCTTTTGCGATGACACCTGCTGAGGAGGGATGCTGGCACGTACTGTTTTG
CGCAGCGTGCCCTTCCGGGGCGTCGCACGCCAGTCCTTGAACAAGACCTC
CACGCCATTGCCATGGGTCGTGTTCTCTTCGATGGTGTTGTTGAGTACGA
GGATGGCACCCCCGCCACCACCTCCCAGATGGCCAAGGACGTCGTCGAGT
TCCTCAACTGGGCTGCCGAGCCTGAGATGGACGACCGCAAGAAGATGGGT
GTCAAGGCTATCACCCTCCTGACCGGTCTCTTCGCCATCAGCGTCTGGGT
CAAGCGTTACAAGTGGTCCCCGATCAAGACGAGAAAGATTGTGTACAGCC
CCCCCGTTTCCCGGCGCTGACCTCCGTCGTGGTTTCCAGGTCTACCGTGA
AGTCTGTGCCAGCTGCCACTCCCTGACCCGTGTGCCTTGGCGCTCGTTCG
TCGGTGTCATGCACACCGTCGATGAGATGAAGGCCATGGCTGAGGAGAAC
GAGTACGACACCGAGCCCAACGACCAGGGCGAGATCGAGAAGCGTCCCGG
AAAGCTGTCCGACTACATCCCTGCTCCCTACAAGAACGAGGAGGCTGCTC
GTGCTGCCAACGGTGGTGCTCTCCCCCCGGATCTCAGCTTGATCGTCAAG
GGCCGTCACGGTGGCTGCAACTACATCTTCAGTCTGCTGACTGGTTACCC
CGATGAGCCCCCGGCTGGTGCCACCGTCGGTGCTGGCATGAACTTCAACC
CCTACTTCCCCGGTACCGATTGCACCCTACCGCGTACCCTTGGGAGCACG
CCAAGTGGAACAAGACCTTCGATCACCAGGCCGTGCGTCTTCCTCCGCCG
CCGGTGCCGAATCCGCCAGCTCCCCCTTCCACCTCACACTCACTGCGTCC
GCCGCAACCGCCGTCGCTCTCGGATCCGCCGCGTATCTCTATGGCCAGGA
GGCTTTTGCGATGACACCTGCTGAGGAGGGATGCTGGCACGTACTGTTTT
GCGCAGCGTGCCCTTCCGGGGCGTCGCACGCCAGTCCTTGAACAAGACCT
CCACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0020037 | heme binding |
| GO:0009055 | electron transfer activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021157 |
| DBxref | InterPro:IPR009056 |
| DBxref | InterPro:IPR036909 |
| DBxref | InterPro:IPR002326 |
| DBxref | PFAM:PF02167 |
| Product | cytochrome c1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1462326..1463666 - |
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