|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1482792..1484465+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000497-T1 ID=CBS51388_000497-T1|Name=CBS51388_000497-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1674bp|location=Sequence derived from alignment at An01:1482792..1484465+ (Aspergillus niger CBS 513.88)
ATGGCGACTCTTCTACCTCCCCCGTCGAAGCGTCAGAGGACAGAGAATGC
TGAGCGGGCCCGCCTGCAGCAGGAGATCCAGAGTGTTCCAGAGAACCTGG
GTAGCATTCGTGTGCAATTCTTCGACCAGGCGACGGGATCTGCGACCGGG
CCGGCGGTGTCCGTTCCAGTTGCTGATGCCAGTGTGAAGAATCTCGAGAC
TCTTTTGAATACGTTACAAGGCAATGTAGGTATGCAGCAAGGCATTGTTC
AGCATATACCAGAGACTAATAGATTTCTTTTTGCGCCGCAGGAAGAAGAT
GAGCGAGTACCGTACCGGTTCACATACCAATCCGATGGCAAAGACAAAAA
CGACCAGACAATCGATATCCTCTCTGACTTGTACCACTCCCTCTTGAAGC
CCGGCCTGAAGACAACCGAAGATACTGTACATCTCTACTTCACTCCCCAG
GCTGTGTTCCGCGTCAAAGCCGTTTCACGATGCTCCGCTGCGATCGCCGG
ACACGGCGAGGCAATTCTTGCGACCAGCTTCTCCCCTGTTAACTCGTCCA
CAATGGTTACCGGCAGCGGTGACTCTACAGCTCGCATCTGGGATTGCGAC
ACTGGAACTCCTCTGCACACTCTGAAGGGCCATACCAGCTGGGTGCTGGC
GGTCAGCTACTCGCCCAACGGCGCAATGATTGCGACGGGAAGCATGGACA
ATACCGTGCGCTTCTGGGACGCAAAGAAGGGAACCCCGTTGGGCGCGCCC
TTGAAGGGACACGCCAAATGGATCACCAGTCTGGCCTGGGAACCATACCA
TCTTCAGCAGCCCGGCCGGCCGCGCCTGGCGTCCGCGTCCAAGGACTCGA
CAGTCCGCATATGGGACGTGGTCTCGAAACGCATCGACACCGTTCTCACC
GGGCACAAGGGCTCCGTGACCTGCGTCCGCTGGGGCGGAACCGGGAACAT
CTACACTGCTTCTCACGACAAGACCATCAAGGTATGGAATGCTCAGAACG
GTACCCTGCGTCAGACCCTTTCTGCGCACGCCCACCGCGTCAACCACCTG
GCCCTGTCTACCGACTTTGTCCTCCGCACTGCGTACCACGACCACACCGG
CAAGGTGCCGCAGGCCGATGCCGAGAAGATCGCGGCAGCCAAGCAGCGAT
TCGAGCAGGCGGCGACCATCAACAACAAGATCGTCGAGAAGCTAGTATCA
GCGAGTGACGACTTCACTATGTACTTGTGGGAGCCGGTTAATTCGAGTAA
GCCAATTGCGCGACTGCTGGGACACCAGAAGGAGGTGAACCATGTGACGT
TCTCGCCGGACATGGCGTACATTGCGTCCGCGGGATTCGACAACCATGTT
AAGCTGTGGAACGCCCGTGACGGGAAGTGAGTTTTTACCACAGCTTCAAA
ATGTGACATACAAGTACTAATGGACAATAGATTTATCACGACACTCCGCG
GCCACGTCGGCGCCGTGTATCAGTGCTGCTTCTCGGCTGATTCCCGGCTG
CTGGTCTCGTCGTCCAAGGACACAACGCTGAAGGTATGGAATGTGCGGAC
GGGCAAGTTGCAAGAGGATCTGCCGGGCCACAAGGACGAGGTGTTTGCAG
TAGATTGGAGTCCGGATGGACAGAAGGTGGGAAGTGGCGGGAAAGACAAG
GCGGTGCGGATATGGAGGAATTAG back to topCoding sequence (CDS) from alignment at An01:1482792..1484465+ >CBS51388_000497-T1 ID=CBS51388_000497-T1|Name=CBS51388_000497-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4662bp|location=Sequence derived from alignment at An01:1482792..1484465+ (Aspergillus niger CBS 513.88)
ATGGCGACTCTTCTACCTCCCCCGTCGAAGCGTCAGAGGACAGAGAATGC
TGAGCGGGCCCGCCTGCAGCAGGAGATCCAGAGTGTTCCAGAGAACCTGG
GTAGCATTCGTGTGCAATTCTTCGACCAGGCGACGGGATCTGCGACCGGG
CCGGCGGTGTCCGTTCCAGTTGCTGATGCCAGTGTGAAGAATCTCGAGAC
TCTTTTGAATACGTTACAAGGCAATGAAGAAGATGAGCGAGTACCGTACC
GGTTCACATACCAATCCGATGGCAAAGACAAAAACGACCAGACAATCGAT
ATCCTCTCTGACTTGTACCACTCCCTCTTGAAGCCCGGCCTGAAGACAAC
CGAAGATACTGTACATCTCTACTTCACTCCCCAGGCTGTGTTCCGCGTCA
AAGCCGTTTCACGATGCTCCGCTGCGATCGCCGGACACGGCGAGGCAATT
CTTGCGACCAGCTTCTCCCCTGTTAACTCGTCCACAATGGTTACCGGCAG
CGGTGACTCTACAGCTCGCATCTGGGATTGCGACACTGGAACTCCTCTGC
ACACTCTGAAGGGCCATACCAGCTGGGTGCTGGCGGTCAGCTACTCGCCC
AACGGCGCAATGATTGCGACGGGAAGCATGGACAATACCGTGCGCTTCTG
GGACGCAAAGAAGGGAACCCCGTTGGGCGCGCCCTTGAAGGGACACGCCA
AATGGATCACCAGTCTGGCCTGGGAACCATACCATCTTCAGCAGCCCGGC
CGGCCGCGCCTGGCGTCCGCGTCCAAGGACTCGACAGTCCGCATATGGGA
CGTGGTCTCGAAACGCATCGACACCGTTCTCACCGGGCACAAGGGCTCCG
TGACCTGCGTCCGCTGGGGCGGAACCGGGAACATCTACACTGCTTCTCAC
GACAAGACCATCAAGGTATGGAATGCTCAGAACGGTACCCTGCGTCAGAC
CCTTTCTGCGCACGCCCACCGCGTCAACCACCTGGCCCTGTCTACCGACT
TTGTCCTCCGCACTGCGTACCACGACCACACCGGCAAGGTGCCGCAGGCC
GATGCCGAGAAGATCGCGGCAGCCAAGCAGCGATTCGAGCAGGCGGCGAC
CATCAACAACAAGATCGTCGAGAAGCTAGTATCAGCGAGTGACGACTTCA
CTATGTACTTGTGGGAGCCGGTTAATTCGAGTAAGCCAATTGCGCGACTG
CTGGGACACCAGAAGGAGGTGAACCATGTGACGTTCTCGCCGGACATGGC
GTACATTGCGTCCGCGGGATTCGACAACCATGTTAAGCTGTGGAACGCCC
GTGACGGGAAATTTATCACGACACTCCGCGGCCACGTCGGCGCCGTGTAT
CAGTGCTGCTTCTCGGCTGATTCCCGGCTGCTGGTCTCGTCGTCCAAGGA
CACAACGCTGAAGGTATGGAATGTGCGGACGGGCAAGTTGCAAGAGGATC
TGCCGGGCCACAAGGACGAGGTGTTTGCAGTAGATTGGAGTCCGGATGGA
CAGAAGGTGGGAAGTGGCGGGAAAGACAAGGCGGTGCGGATATGGAGGAA
TTAGATGGCGACTCTTCTACCTCCCCCGTCGAAGCGTCAGAGGACAGAGA
ATGCTGAGCGGGCCCGCCTGCAGCAGGAGATCCAGAGTGTTCCAGAGAAC
CTGGGTAGCATTCGTGTGCAATTCTTCGACCAGGCGACGGGATCTGCGAC
CGGGCCGGCGGTGTCCGTTCCAGTTGCTGATGCCAGTGTGAAGAATCTCG
AGACTCTTTTGAATACGTTACAAGGCAATGAAGAAGATGAGCGAGTACCG
TACCGGTTCACATACCAATCCGATGGCAAAGACAAAAACGACCAGACAAT
CGATATCCTCTCTGACTTGTACCACTCCCTCTTGAAGCCCGGCCTGAAGA
CAACCGAAGATACTGTACATCTCTACTTCACTCCCCAGGCTGTGTTCCGC
GTCAAAGCCGTTTCACGATGCTCCGCTGCGATCGCCGGACACGGCGAGGC
AATTCTTGCGACCAGCTTCTCCCCTGTTAACTCGTCCACAATGGTTACCG
GCAGCGGTGACTCTACAGCTCGCATCTGGGATTGCGACACTGGAACTCCT
CTGCACACTCTGAAGGGCCATACCAGCTGGGTGCTGGCGGTCAGCTACTC
GCCCAACGGCGCAATGATTGCGACGGGAAGCATGGACAATACCGTGCGCT
TCTGGGACGCAAAGAAGGGAACCCCGTTGGGCGCGCCCTTGAAGGGACAC
GCCAAATGGATCACCAGTCTGGCCTGGGAACCATACCATCTTCAGCAGCC
CGGCCGGCCGCGCCTGGCGTCCGCGTCCAAGGACTCGACAGTCCGCATAT
GGGACGTGGTCTCGAAACGCATCGACACCGTTCTCACCGGGCACAAGGGC
TCCGTGACCTGCGTCCGCTGGGGCGGAACCGGGAACATCTACACTGCTTC
TCACGACAAGACCATCAAGGTATGGAATGCTCAGAACGGTACCCTGCGTC
AGACCCTTTCTGCGCACGCCCACCGCGTCAACCACCTGGCCCTGTCTACC
GACTTTGTCCTCCGCACTGCGTACCACGACCACACCGGCAAGGTGCCGCA
GGCCGATGCCGAGAAGATCGCGGCAGCCAAGCAGCGATTCGAGCAGGCGG
CGACCATCAACAACAAGATCGTCGAGAAGCTAGTATCAGCGAGTGACGAC
TTCACTATGTACTTGTGGGAGCCGGTTAATTCGAGTAAGCCAATTGCGCG
ACTGCTGGGACACCAGAAGGAGGTGAACCATGTGACGTTCTCGCCGGACA
TGGCGTACATTGCGTCCGCGGGATTCGACAACCATGTTAAGCTGTGGAAC
GCCCGTGACGGGAAATTTATCACGACACTCCGCGGCCACGTCGGCGCCGT
GTATCAGTGCTGCTTCTCGGCTGATTCCCGGCTGCTGGTCTCGTCGTCCA
AGGACACAACGCTGAAGGTATGGAATGTGCGGACGGGCAAGTTGCAAGAG
GATCTGCCGGGCCACAAGGACGAGGTGTTTGCAGTAGATTGGAGTCCGGA
TGGACAGAAGGTGGGAAGTGGCGGGAAAGACAAGGCGGTGCGGATATGGA
GGAATTAGATGGCGACTCTTCTACCTCCCCCGTCGAAGCGTCAGAGGACA
GAGAATGCTGAGCGGGCCCGCCTGCAGCAGGAGATCCAGAGTGTTCCAGA
GAACCTGGGTAGCATTCGTGTGCAATTCTTCGACCAGGCGACGGGATCTG
CGACCGGGCCGGCGGTGTCCGTTCCAGTTGCTGATGCCAGTGTGAAGAAT
CTCGAGACTCTTTTGAATACGTTACAAGGCAATGAAGAAGATGAGCGAGT
ACCGTACCGGTTCACATACCAATCCGATGGCAAAGACAAAAACGACCAGA
CAATCGATATCCTCTCTGACTTGTACCACTCCCTCTTGAAGCCCGGCCTG
AAGACAACCGAAGATACTGTACATCTCTACTTCACTCCCCAGGCTGTGTT
CCGCGTCAAAGCCGTTTCACGATGCTCCGCTGCGATCGCCGGACACGGCG
AGGCAATTCTTGCGACCAGCTTCTCCCCTGTTAACTCGTCCACAATGGTT
ACCGGCAGCGGTGACTCTACAGCTCGCATCTGGGATTGCGACACTGGAAC
TCCTCTGCACACTCTGAAGGGCCATACCAGCTGGGTGCTGGCGGTCAGCT
ACTCGCCCAACGGCGCAATGATTGCGACGGGAAGCATGGACAATACCGTG
CGCTTCTGGGACGCAAAGAAGGGAACCCCGTTGGGCGCGCCCTTGAAGGG
ACACGCCAAATGGATCACCAGTCTGGCCTGGGAACCATACCATCTTCAGC
AGCCCGGCCGGCCGCGCCTGGCGTCCGCGTCCAAGGACTCGACAGTCCGC
ATATGGGACGTGGTCTCGAAACGCATCGACACCGTTCTCACCGGGCACAA
GGGCTCCGTGACCTGCGTCCGCTGGGGCGGAACCGGGAACATCTACACTG
CTTCTCACGACAAGACCATCAAGGTATGGAATGCTCAGAACGGTACCCTG
CGTCAGACCCTTTCTGCGCACGCCCACCGCGTCAACCACCTGGCCCTGTC
TACCGACTTTGTCCTCCGCACTGCGTACCACGACCACACCGGCAAGGTGC
CGCAGGCCGATGCCGAGAAGATCGCGGCAGCCAAGCAGCGATTCGAGCAG
GCGGCGACCATCAACAACAAGATCGTCGAGAAGCTAGTATCAGCGAGTGA
CGACTTCACTATGTACTTGTGGGAGCCGGTTAATTCGAGTAAGCCAATTG
CGCGACTGCTGGGACACCAGAAGGAGGTGAACCATGTGACGTTCTCGCCG
GACATGGCGTACATTGCGTCCGCGGGATTCGACAACCATGTTAAGCTGTG
GAACGCCCGTGACGGGAAATTTATCACGACACTCCGCGGCCACGTCGGCG
CCGTGTATCAGTGCTGCTTCTCGGCTGATTCCCGGCTGCTGGTCTCGTCG
TCCAAGGACACAACGCTGAAGGTATGGAATGTGCGGACGGGCAAGTTGCA
AGAGGATCTGCCGGGCCACAAGGACGAGGTGTTTGCAGTAGATTGGAGTC
CGGATGGACAGAAGGTGGGAAGTGGCGGGAAAGACAAGGCGGTGCGGATA
TGGAGGAATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR012972 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | InterPro:IPR001632 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF08154 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1482792..1484465 + |
|
