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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1532612..1534416+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000517-T1 ID=CBS51388_000517-T1|Name=CBS51388_000517-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1805bp|location=Sequence derived from alignment at An01:1532612..1534416+ (Aspergillus niger CBS 513.88)
ATGGTATGTTGTCTATGACGCCCTTCCTCTTGTTACGTCGCTTTCGACTA
AATACTGACCGCCCCTCAAGGCGTCCTTCGCCAATCCCACGCAGATCTTT
GCGGACGATGTCATCGAAGAGAAGGGTGAGAATGCTCGTTTGTCCGCCTT
CGTCGGTGCCATCGCCGTCGGAGACCTGGTGAAGAGCACCCTGGGTCCCA
AGGGAATGGACAAGATCCTCCAGTCAGCGTATGTGGGATGACCCATTCAA
GCTAAGCGGGGTTGCACCCCCCGAACACCACACTGATATTACGGCTGATA
TAGGTCGACCGGAGACATCCTCGTTACGAATGACGGTGCTACGATTCTTA
AGTCAATTGCTCTCGACAACGCTGCGGCCAAGGTTCTCGTCAACATCTCG
AAGGTGCAGGATGACGAAGTTGGTGACGGCACCACTTCCGTGACCGTGTT
GGCTGCGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCGCAAGATCC
ACCCCCAGACCATCATCGAGGGATACCGGATAGCTAGCAAGGCGGCTCTG
GAGGCCTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATGGAGTCGTT
CCGCAAAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTCGAAGGTCC
TGGCCCAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACGCTGTCCTC
CGTCTCCGTGGCTCGACCGACCTGAGCCACATCCAGATCATCAAGAAGGC
CGGTGGCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCATCCTCGACA
AGAAGATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCAAGATTCTG
GTCGCCAACACGGCCATGGACACAGACAAGGTGAAGATCTTCGGTGCACG
GGTGAAGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAAGGCGGAGC
GTGAGAAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACGGAATCAAC
TGCTTCGTCAACCGTCAACTCATCTACAACTGGCCCGAACAGCTGTTTAC
GGAAGCTGGCATCATGTCCATTGAGCACGCCGACTTCGATGGTGTTGAGC
GCTTGGCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCGACCACCCC
GAACAGGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTCATCATTGG
CGAGGATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCAGGCATGCA
CCATTGTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAGCCGAGCGC
TCCCTCCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAGGACCCCCG
GGTGACCCTGGGTGGTGGCTGTGCCGAGATGGTGATGTCCAAGGCCGTTG
AGCAGGCTGCCCAGAACACGACCGGCAAGAAGCAGATGGCCGTGGATGCT
TTTGCGTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGACAACGCTGG
TCTGGACTCCAGCGACCTAGTGACGCGACTACGACAGGCGATCAACAACG
GCATGACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTGGCATTGCT
GACATGCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAGAAGGCGGT
AGTGTCCTCTGCGTCGGAGGCTGCAGAGGTAAGAATCACATTCCTTTGAG
TTTATCTGGCAAAGTTTGATTATACTGAAACTAACCAACCTACAGCTTCT
CCTGCGTGTCGACAACATCATCCGGGCTGCGCCCCGTAGACGTGAGCGTA
TGTAA back to topCoding sequence (CDS) from alignment at An01:1532612..1534416+ >CBS51388_000517-T1 ID=CBS51388_000517-T1|Name=CBS51388_000517-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6384bp|location=Sequence derived from alignment at An01:1532612..1534416+ (Aspergillus niger CBS 513.88)
ATGGCGTCCTTCGCCAATCCCACGCAGATCTTTGCGGACGATGTCATCGA
AGAGAAGGGTGAGAATGCTCGTTTGTCCGCCTTCGTCGGTGCCATCGCCG
TCGGAGACCTGGTGAAGAGCACCCTGGGTCCCAAGGGAATGGACAAGATC
CTCCAGTCAGCGTCGACCGGAGACATCCTCGTTACGAATGACGGTGCTAC
GATTCTTAAGTCAATTGCTCTCGACAACGCTGCGGCCAAGGTTCTCGTCA
ACATCTCGAAGGTGCAGGATGACGAAGTTGGTGACGGCACCACTTCCGTG
ACCGTGTTGGCTGCGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCG
CAAGATCCACCCCCAGACCATCATCGAGGGATACCGGATAGCTAGCAAGG
CGGCTCTGGAGGCCTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATG
GAGTCGTTCCGCAAAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTC
GAAGGTCCTGGCCCAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACG
CTGTCCTCCGTCTCCGTGGCTCGACCGACCTGAGCCACATCCAGATCATC
AAGAAGGCCGGTGGCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCAT
CCTCGACAAGAAGATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCA
AGATTCTGGTCGCCAACACGGCCATGGACACAGACAAGGTGAAGATCTTC
GGTGCACGGGTGAAGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAA
GGCGGAGCGTGAGAAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACG
GAATCAACTGCTTCGTCAACCGTCAACTCATCTACAACTGGCCCGAACAG
CTGTTTACGGAAGCTGGCATCATGTCCATTGAGCACGCCGACTTCGATGG
TGTTGAGCGCTTGGCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCG
ACCACCCCGAACAGGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTC
ATCATTGGCGAGGATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCA
GGCATGCACCATTGTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAG
CCGAGCGCTCCCTCCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAG
GACCCCCGGGTGACCCTGGGTGGTGGCTGTGCCGAGATGGTGATGTCCAA
GGCCGTTGAGCAGGCTGCCCAGAACACGACCGGCAAGAAGCAGATGGCCG
TGGATGCTTTTGCGTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGAC
AACGCTGGTCTGGACTCCAGCGACCTAGTGACGCGACTACGACAGGCGAT
CAACAACGGCATGACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTG
GCATTGCTGACATGCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAG
AAGGCGGTAGTGTCCTCTGCGTCGGAGGCTGCAGAGCTTCTCCTGCGTGT
CGACAACATCATCCGGGCTGCGCCCCGTAGACGTGAGCGTATGTAAATGG
CGTCCTTCGCCAATCCCACGCAGATCTTTGCGGACGATGTCATCGAAGAG
AAGGGTGAGAATGCTCGTTTGTCCGCCTTCGTCGGTGCCATCGCCGTCGG
AGACCTGGTGAAGAGCACCCTGGGTCCCAAGGGAATGGACAAGATCCTCC
AGTCAGCGTCGACCGGAGACATCCTCGTTACGAATGACGGTGCTACGATT
CTTAAGTCAATTGCTCTCGACAACGCTGCGGCCAAGGTTCTCGTCAACAT
CTCGAAGGTGCAGGATGACGAAGTTGGTGACGGCACCACTTCCGTGACCG
TGTTGGCTGCGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCGCAAG
ATCCACCCCCAGACCATCATCGAGGGATACCGGATAGCTAGCAAGGCGGC
TCTGGAGGCCTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATGGAGT
CGTTCCGCAAAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTCGAAG
GTCCTGGCCCAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACGCTGT
CCTCCGTCTCCGTGGCTCGACCGACCTGAGCCACATCCAGATCATCAAGA
AGGCCGGTGGCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCATCCTC
GACAAGAAGATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCAAGAT
TCTGGTCGCCAACACGGCCATGGACACAGACAAGGTGAAGATCTTCGGTG
CACGGGTGAAGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAAGGCG
GAGCGTGAGAAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACGGAAT
CAACTGCTTCGTCAACCGTCAACTCATCTACAACTGGCCCGAACAGCTGT
TTACGGAAGCTGGCATCATGTCCATTGAGCACGCCGACTTCGATGGTGTT
GAGCGCTTGGCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCGACCA
CCCCGAACAGGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTCATCA
TTGGCGAGGATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCAGGCA
TGCACCATTGTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAGCCGA
GCGCTCCCTCCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAGGACC
CCCGGGTGACCCTGGGTGGTGGCTGTGCCGAGATGGTGATGTCCAAGGCC
GTTGAGCAGGCTGCCCAGAACACGACCGGCAAGAAGCAGATGGCCGTGGA
TGCTTTTGCGTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGACAACG
CTGGTCTGGACTCCAGCGACCTAGTGACGCGACTACGACAGGCGATCAAC
AACGGCATGACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTGGCAT
TGCTGACATGCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAGAAGG
CGGTAGTGTCCTCTGCGTCGGAGGCTGCAGAGCTTCTCCTGCGTGTCGAC
AACATCATCCGGGCTGCGCCCCGTAGACGTGAGCGTATGTAAATGGCGTC
CTTCGCCAATCCCACGCAGATCTTTGCGGACGATGTCATCGAAGAGAAGG
GTGAGAATGCTCGTTTGTCCGCCTTCGTCGGTGCCATCGCCGTCGGAGAC
CTGGTGAAGAGCACCCTGGGTCCCAAGGGAATGGACAAGATCCTCCAGTC
AGCGTCGACCGGAGACATCCTCGTTACGAATGACGGTGCTACGATTCTTA
AGTCAATTGCTCTCGACAACGCTGCGGCCAAGGTTCTCGTCAACATCTCG
AAGGTGCAGGATGACGAAGTTGGTGACGGCACCACTTCCGTGACCGTGTT
GGCTGCGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCGCAAGATCC
ACCCCCAGACCATCATCGAGGGATACCGGATAGCTAGCAAGGCGGCTCTG
GAGGCCTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATGGAGTCGTT
CCGCAAAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTCGAAGGTCC
TGGCCCAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACGCTGTCCTC
CGTCTCCGTGGCTCGACCGACCTGAGCCACATCCAGATCATCAAGAAGGC
CGGTGGCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCATCCTCGACA
AGAAGATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCAAGATTCTG
GTCGCCAACACGGCCATGGACACAGACAAGGTGAAGATCTTCGGTGCACG
GGTGAAGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAAGGCGGAGC
GTGAGAAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACGGAATCAAC
TGCTTCGTCAACCGTCAACTCATCTACAACTGGCCCGAACAGCTGTTTAC
GGAAGCTGGCATCATGTCCATTGAGCACGCCGACTTCGATGGTGTTGAGC
GCTTGGCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCGACCACCCC
GAACAGGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTCATCATTGG
CGAGGATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCAGGCATGCA
CCATTGTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAGCCGAGCGC
TCCCTCCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAGGACCCCCG
GGTGACCCTGGGTGGTGGCTGTGCCGAGATGGTGATGTCCAAGGCCGTTG
AGCAGGCTGCCCAGAACACGACCGGCAAGAAGCAGATGGCCGTGGATGCT
TTTGCGTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGACAACGCTGG
TCTGGACTCCAGCGACCTAGTGACGCGACTACGACAGGCGATCAACAACG
GCATGACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTGGCATTGCT
GACATGCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAGAAGGCGGT
AGTGTCCTCTGCGTCGGAGGCTGCAGAGCTTCTCCTGCGTGTCGACAACA
TCATCCGGGCTGCGCCCCGTAGACGTGAGCGTATGTAAATGGCGTCCTTC
GCCAATCCCACGCAGATCTTTGCGGACGATGTCATCGAAGAGAAGGGTGA
GAATGCTCGTTTGTCCGCCTTCGTCGGTGCCATCGCCGTCGGAGACCTGG
TGAAGAGCACCCTGGGTCCCAAGGGAATGGACAAGATCCTCCAGTCAGCG
TCGACCGGAGACATCCTCGTTACGAATGACGGTGCTACGATTCTTAAGTC
AATTGCTCTCGACAACGCTGCGGCCAAGGTTCTCGTCAACATCTCGAAGG
TGCAGGATGACGAAGTTGGTGACGGCACCACTTCCGTGACCGTGTTGGCT
GCGGAGTTGCTGCGGGAGGCTGAGAAGCTCGTGAACCGCAAGATCCACCC
CCAGACCATCATCGAGGGATACCGGATAGCTAGCAAGGCGGCTCTGGAGG
CCTTGGAGAAGGCGGCTGTTGACCGTAGTGCCGATATGGAGTCGTTCCGC
AAAGACCTCCATGCCATCGCTCGTACCACCCTCAGTTCGAAGGTCCTGGC
CCAGGACCGTGATCAGTTCGCTGCCCTCGCCTGTGACGCTGTCCTCCGTC
TCCGTGGCTCGACCGACCTGAGCCACATCCAGATCATCAAGAAGGCCGGT
GGCAAGCTTAGCGACTCCTACCTCGACGAGGGTTTCATCCTCGACAAGAA
GATCGGTGTGAACCAGCCCAAGCGCTTGGAGAACGCCAAGATTCTGGTCG
CCAACACGGCCATGGACACAGACAAGGTGAAGATCTTCGGTGCACGGGTG
AAGGTCGAGTCGACAGGCAAGCTGGCGGATCTCGAGAAGGCGGAGCGTGA
GAAGATGAAGGCCAAGGTTGAGCGGATCAAGGCCCACGGAATCAACTGCT
TCGTCAACCGTCAACTCATCTACAACTGGCCCGAACAGCTGTTTACGGAA
GCTGGCATCATGTCCATTGAGCACGCCGACTTCGATGGTGTTGAGCGCTT
GGCCCTGGTCACTGGCGGTGAGATCGCCTCGACATTCGACCACCCCGAAC
AGGTCAAGCTGGGTCAGTGCGACGTTATCGAGGAGGTCATCATTGGCGAG
GATACGCTCATCAAGTTCTCGGGCGTGGCTGCCGGTCAGGCATGCACCAT
TGTGCTCCGTGGTGCCACGGAGCAGCTGCTCGACGAAGCCGAGCGCTCCC
TCCACGACGCTCTGGCCGTGCTCTCTCAGACGGTCAAGGACCCCCGGGTG
ACCCTGGGTGGTGGCTGTGCCGAGATGGTGATGTCCAAGGCCGTTGAGCA
GGCTGCCCAGAACACGACCGGCAAGAAGCAGATGGCCGTGGATGCTTTTG
CGTACGCTCTGAAGCAGCTCCCTACCATTCTGGCGGACAACGCTGGTCTG
GACTCCAGCGACCTAGTGACGCGACTACGACAGGCGATCAACAACGGCAT
GACCAGCTCCGGACTGGATCTGCTCACCCCTGGCGGTGGCATTGCTGACA
TGCGCGAGTTGGGTGTTGTGGAGAGCTACAAGCTGAAGAAGGCGGTAGTG
TCCTCTGCGTCGGAGGCTGCAGAGCTTCTCCTGCGTGTCGACAACATCAT
CCGGGCTGCGCCCCGTAGACGTGAGCGTATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005829 | cytosol |
| GO:0005832 | chaperonin-containing T-complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006457 | protein folding |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051082 | unfolded protein binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002194 |
| DBxref | InterPro:IPR027413 |
| DBxref | InterPro:IPR012716 |
| DBxref | InterPro:IPR027410 |
| DBxref | InterPro:IPR002423 |
| DBxref | InterPro:IPR027409 |
| DBxref | InterPro:IPR017998 |
| DBxref | PFAM:PF00118 |
| Product | T-complex protein 1 subunit beta |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1532612..1534416 + |
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