|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1541928..1543217- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000520-T1 ID=CBS51388_000520-T1|Name=CBS51388_000520-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1290bp|location=Sequence derived from alignment at An01:1541928..1543217- (Aspergillus niger CBS 513.88)
ATGACAACCCCCTTCCCCCCACCCCCAACCCGCTCCATCGACTGGACCAA
CATCGGCTTCAAAGTGCGCGACGGTATGCCCCCATTCCTAATCCCCCCTC
CCCCTCAATTCCTCTCACCAACCCACTAATAACCCATCTCCAATACTTTA
GTAAACTACCACGTCGAATGCACCTACACCCCCCAAACCCACACCTGGAG
CACCCCCCAACTAATCAAATCCCCGCACCTCTCCATCCACGGCCTCTCCC
CAGCCCTAAACTACGGCCAACAAGCCTACGAAGGCCTGAAAGCCTTTCGC
CATGCCACCACCACCACAACTACCAACGATAACAGCAGCAGAAATGACAA
AATAACCATATTCCGCCCAACCCTCAACGCCACCCGCCTCGCCCACTCCT
CCACCATCCTCTCCATCCCCCCAATCCCAACCCCCATCTTCCTCTCAGCC
GTGAACCTGGCCGTGGCCTCCAACGCCGAATACGTCCCACCGCACCACAC
AACGCTCACACCCACGTCAGGAGAGAAACCGGGAGTCTCAGCGCTCTACA
TCCGGCCCCTCGTCTTCGGCTCCAGTCCCCAAATCTCCCTAACGCCCCCC
GAAACATTCACCTTCGCCGTCTTCGTGACCCCGACAGGCCTGTACCACGG
GATATCCGCCGTGGACGCGCTGATCCTCGAAGAGTACGATCGCACGGCCC
CAAAGGGAACAGGGAGCGCCAAAGCGGGGGGCAACTATGCTCCAGTGCAA
CGACATAGCATGGCAGCTTACAAAGAGGGGTATGGGATAACGTTGCATTT
GGATAGTAAGACGCGGACGGAGGTGGATGAGTTTTCGACGAGTGCGTTTA
TTGGGGTGAAATATAACAATAATGGGGAGGGGGAGGGGAAAGTGACGCTC
GTGCAGCCGGATAGCGTGAACGTGATTGACTCGGTGACTGCGGCGTCGGT
GTTGGAGATCGGGGAGAAGATGCTGGGGTATACGGTGGAGAAGAGAAGCG
TCAAGTATGAGGAGATTAGGGAGTTTGATGAGGTGATTGCGGCGGGGACG
GCGGCGGGGTTGGTTCCTGTTAGGAGTATTACGATGAAGAGTAAGGGGGA
TAAGTGGGGGTTTGAGTGTGGTGGTGAAAAGGGGGAAGGGGGCCCGGTGT
GTAGGAAGTTGTTGGGGTTGTTGCAGGGGATTCAGACGGGGGAGGTGGAG
GATGTGTTTGGGTGGAATTGGGTGGTTAGGGAGGTGGAGGGGGTTATGGG
GAAGGGAGGGAGTGGGGGTGGGAAAGGAGAATGCGGTTAA back to topCoding sequence (CDS) from alignment at An01:1541928..1543217- >CBS51388_000520-T1 ID=CBS51388_000520-T1|Name=CBS51388_000520-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2424bp|location=Sequence derived from alignment at An01:1541928..1543217- (Aspergillus niger CBS 513.88)
TAAACTACCACGTCGAATGCACCTACACCCCCCAAACCCACACCTGGAGC
ACCCCCCAACTAATCAAATCCCCGCACCTCTCCATCCACGGCCTCTCCCC
AGCCCTAAACTACGGCCAACAAGCCTACGAAGGCCTGAAAGCCTTTCGCC
ATGCCACCACCACCACAACTACCAACGATAACAGCAGCAGAAATGACAAA
ATAACCATATTCCGCCCAACCCTCAACGCCACCCGCCTCGCCCACTCCTC
CACCATCCTCTCCATCCCCCCAATCCCAACCCCCATCTTCCTCTCAGCCG
TGAACCTGGCCGTGGCCTCCAACGCCGAATACGTCCCACCGCACCACACA
ACGCTCACACCCACGTCAGGAGAGAAACCGGGAGTCTCAGCGCTCTACAT
CCGGCCCCTCGTCTTCGGCTCCAGTCCCCAAATCTCCCTAACGCCCCCCG
AAACATTCACCTTCGCCGTCTTCGTGACCCCGACAGGCCTGTACCACGGG
ATATCCGCCGTGGACGCGCTGATCCTCGAAGAGTACGATCGCACGGCCCC
AAAGGGAACAGGGAGCGCCAAAGCGGGGGGCAACTATGCTCCAGTGCAAC
GACATAGCATGGCAGCTTACAAAGAGGGGTATGGGATAACGTTGCATTTG
GATAGTAAGACGCGGACGGAGGTGGATGAGTTTTCGACGAGTGCGTTTAT
TGGGGTGAAATATAACAATAATGGGGAGGGGGAGGGGAAAGTGACGCTCG
TGCAGCCGGATAGCGTGAACGTGATTGACTCGGTGACTGCGGCGTCGGTG
TTGGAGATCGGGGAGAAGATGCTGGGGTATACGGTGGAGAAGAGAAGCGT
CAAGTATGAGGAGATTAGGGAGTTTGATGAGGTGATTGCGGCGGGGACGG
CGGCGGGGTTGGTTCCTGTTAGGAGTATTACGATGAAGAGTAAGGGGGAT
AAGTGGGGGTTTGAGTGTGGTGGTGAAAAGGGGGAAGGGGGCCCGGTGTG
TAGGAAGTTGTTGGGGTTGTTGCAGGGGATTCAGACGGGGGAGGTGGAGG
ATGTGTTTGGGTGGAATTGGGTGGTTAGGGAGGTGGAGGGGGTTATGGGG
AAGGGAGGGAGTGGGGGTGGGAAAGGAGAATGCGGTTAAATGACAACCCC
CTTCCCCCCACCCCCAACCCGCTCCATCGACTGGACCAACATCGGCTTCA
AAGTGCGCGACGTAAACTACCACGTCGAATGCACCTACACCCCCCAAACC
CACACCTGGAGCACCCCCCAACTAATCAAATCCCCGCACCTCTCCATCCA
CGGCCTCTCCCCAGCCCTAAACTACGGCCAACAAGCCTACGAAGGCCTGA
AAGCCTTTCGCCATGCCACCACCACCACAACTACCAACGATAACAGCAGC
AGAAATGACAAAATAACCATATTCCGCCCAACCCTCAACGCCACCCGCCT
CGCCCACTCCTCCACCATCCTCTCCATCCCCCCAATCCCAACCCCCATCT
TCCTCTCAGCCGTGAACCTGGCCGTGGCCTCCAACGCCGAATACGTCCCA
CCGCACCACACAACGCTCACACCCACGTCAGGAGAGAAACCGGGAGTCTC
AGCGCTCTACATCCGGCCCCTCGTCTTCGGCTCCAGTCCCCAAATCTCCC
TAACGCCCCCCGAAACATTCACCTTCGCCGTCTTCGTGACCCCGACAGGC
CTGTACCACGGGATATCCGCCGTGGACGCGCTGATCCTCGAAGAGTACGA
TCGCACGGCCCCAAAGGGAACAGGGAGCGCCAAAGCGGGGGGCAACTATG
CTCCAGTGCAACGACATAGCATGGCAGCTTACAAAGAGGGGTATGGGATA
ACGTTGCATTTGGATAGTAAGACGCGGACGGAGGTGGATGAGTTTTCGAC
GAGTGCGTTTATTGGGGTGAAATATAACAATAATGGGGAGGGGGAGGGGA
AAGTGACGCTCGTGCAGCCGGATAGCGTGAACGTGATTGACTCGGTGACT
GCGGCGTCGGTGTTGGAGATCGGGGAGAAGATGCTGGGGTATACGGTGGA
GAAGAGAAGCGTCAAGTATGAGGAGATTAGGGAGTTTGATGAGGTGATTG
CGGCGGGGACGGCGGCGGGGTTGGTTCCTGTTAGGAGTATTACGATGAAG
AGTAAGGGGGATAAGTGGGGGTTTGAGTGTGGTGGTGAAAAGGGGGAAGG
GGGCCCGGTGTGTAGGAAGTTGTTGGGGTTGTTGCAGGGGATTCAGACGG
GGGAGGTGGAGGATGTGTTTGGGTGGAATTGGGTGGTTAGGGAGGTGGAG
GGGGTTATGGGGAAGGGAGGGAGTGGGGGTGGGAAAGGAGAATGCGGTTA
AATGACAACCCCCTTCCCCCCACCCCCAACCCGCTCCATCGACTGGACCA
ACATCGGCTTCAAAGTGCGCGACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009081 | branched-chain amino acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004084 | branched-chain-amino-acid transaminase activity |
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036038 |
| DBxref | InterPro:IPR005786 |
| DBxref | InterPro:IPR001544 |
| DBxref | InterPro:IPR043131 |
| DBxref | InterPro:IPR043132 |
| DBxref | PFAM:PF01063 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1541928..1543217 - |
|
