|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1582997..1584148+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000538-T1 ID=CBS51388_000538-T1|Name=CBS51388_000538-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1152bp|location=Sequence derived from alignment at An01:1582997..1584148+ (Aspergillus niger CBS 513.88)
ATGCCCCCCACCAAAACCCTCCTCATCATCGGCATAACCGGCAACCAAGG
CCACTCCATCGCCTCGCGCTTCCTGCACGACCCAACCTACCACATCATCG
GCCTAACCCGCAACCCAACCTCGCCCATCGCCCAATCCCTCTCCGCGCAA
GGCATCGAGATCCTCCCCGCCGATCTCAACGACCCCACCACTCTCATCCC
CGCCTTCCGCGGCGCGAACCTCATCTTCAGTGTTACCAACTACTGGGAGC
CGTTCTTCCGCGCAGACTGTCGCAAACAGGCTGCGGAGCGGGGTATCTCG
TGCCGACGGTACGCGTACGAGGTGGAGTTGCAGCAGGGGAAGAATATTGC
TGATGCGGCTGCCGCGACGGTGGACTCGTTGGATGAGAATGGGTTTGTGG
TGTCGACGTTGAGTCATGCGGCGGTGTGTAGTGGGGGACGGTTTGGGGAG
TTGTACCATTTTGATGCGAAGGCGGAGGTGTTTCCGAATTATGTGAGGGA
GAGGTATCCCAAGTTGGCGGGGAAGATGTCGTGTGTACAGACGGGGTATT
TCATGACGAGTTATAGGTTGGTTCCGGGGGCTTATTTTAACAAGGTGAGT
TTTGAGGTTTTTGGTTGGGGGTGTGGCTCGGGGCATTATGTGGCTGATTT
ATTGCGTTTAGAAGACGACGGAGGAAGGGAAGGTGTCATTTGAGATGACT
TTTACGACTGCGCCTGATGCCAAGGTTCCTCATTTGGATGTTAACGCTGA
CTTAGGAAACTTTGTCTACGCGGTTTCGAAGATGCCACCTGGGAAGAGCT
ATATGGCTTATGGGTCGTATTGTAGCTGGGCAGAGTATATGAGAATCTGG
GGGAGAGTGAATTCTGTTCCAGCATCTTATCGGCAAATTACACTTGAGGA
ACTGATTGAGCAGACTCCTGATCCGGAGTTTGGGCGAGAGGTGGGCGATA
TGTTTACTTATTCGACAGATCCGGGGTATGACGGCGGTGACAAGGAACTG
TTGACGGCAGAGCACATACGCAATGTGAGTACCATGTGATGATTTGTTAA
AGAATCCACAGCTAATATCTACAGGCTGGAATTGAGTGTCCAATGACCAA
CTTGGAGGAGTGGATGCAAAAGGAGGATTGGTCGTCTGTCTTAAATAGTT
GA back to topCoding sequence (CDS) from alignment at An01:1582997..1584148+ >CBS51388_000538-T1 ID=CBS51388_000538-T1|Name=CBS51388_000538-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3105bp|location=Sequence derived from alignment at An01:1582997..1584148+ (Aspergillus niger CBS 513.88)
ATGCCCCCCACCAAAACCCTCCTCATCATCGGCATAACCGGCAACCAAGG
CCACTCCATCGCCTCGCGCTTCCTGCACGACCCAACCTACCACATCATCG
GCCTAACCCGCAACCCAACCTCGCCCATCGCCCAATCCCTCTCCGCGCAA
GGCATCGAGATCCTCCCCGCCGATCTCAACGACCCCACCACTCTCATCCC
CGCCTTCCGCGGCGCGAACCTCATCTTCAGTGTTACCAACTACTGGGAGC
CGTTCTTCCGCGCAGACTGTCGCAAACAGGCTGCGGAGCGGGGTATCTCG
TGCCGACGGTACGCGTACGAGGTGGAGTTGCAGCAGGGGAAGAATATTGC
TGATGCGGCTGCCGCGACGGTGGACTCGTTGGATGAGAATGGGTTTGTGG
TGTCGACGTTGAGTCATGCGGCGGTGTGTAGTGGGGGACGGTTTGGGGAG
TTGTACCATTTTGATGCGAAGGCGGAGGTGTTTCCGAATTATGTGAGGGA
GAGGTATCCCAAGTTGGCGGGGAAGATGTCGTGTGTACAGACGGGGTATT
TCATGACGAGTTATAGGTTGGTTCCGGGGGCTTATTTTAACAAGAAGACG
ACGGAGGAAGGGAAGGTGTCATTTGAGATGACTTTTACGACTGCGCCTGA
TGCCAAGGTTCCTCATTTGGATGTTAACGCTGACTTAGGAAACTTTGTCT
ACGCGGTTTCGAAGATGCCACCTGGGAAGAGCTATATGGCTTATGGGTCG
TATTGTAGCTGGGCAGAGTATATGAGAATCTGGGGGAGAGTGAATTCTGT
TCCAGCATCTTATCGGCAAATTACACTTGAGGAACTGATTGAGCAGACTC
CTGATCCGGAGTTTGGGCGAGAGGTGGGCGATATGTTTACTTATTCGACA
GATCCGGGGTATGACGGCGGTGACAAGGAACTGTTGACGGCAGAGCACAT
ACGCAATGCTGGAATTGAGTGTCCAATGACCAACTTGGAGGAGTGGATGC
AAAAGGAGGATTGGTCGTCTGTCTTAAATAGTTGAATGCCCCCCACCAAA
ACCCTCCTCATCATCGGCATAACCGGCAACCAAGGCCACTCCATCGCCTC
GCGCTTCCTGCACGACCCAACCTACCACATCATCGGCCTAACCCGCAACC
CAACCTCGCCCATCGCCCAATCCCTCTCCGCGCAAGGCATCGAGATCCTC
CCCGCCGATCTCAACGACCCCACCACTCTCATCCCCGCCTTCCGCGGCGC
GAACCTCATCTTCAGTGTTACCAACTACTGGGAGCCGTTCTTCCGCGCAG
ACTGTCGCAAACAGGCTGCGGAGCGGGGTATCTCGTGCCGACGGTACGCG
TACGAGGTGGAGTTGCAGCAGGGGAAGAATATTGCTGATGCGGCTGCCGC
GACGGTGGACTCGTTGGATGAGAATGGGTTTGTGGTGTCGACGTTGAGTC
ATGCGGCGGTGTGTAGTGGGGGACGGTTTGGGGAGTTGTACCATTTTGAT
GCGAAGGCGGAGGTGTTTCCGAATTATGTGAGGGAGAGGTATCCCAAGTT
GGCGGGGAAGATGTCGTGTGTACAGACGGGGTATTTCATGACGAGTTATA
GGTTGGTTCCGGGGGCTTATTTTAACAAGAAGACGACGGAGGAAGGGAAG
GTGTCATTTGAGATGACTTTTACGACTGCGCCTGATGCCAAGGTTCCTCA
TTTGGATGTTAACGCTGACTTAGGAAACTTTGTCTACGCGGTTTCGAAGA
TGCCACCTGGGAAGAGCTATATGGCTTATGGGTCGTATTGTAGCTGGGCA
GAGTATATGAGAATCTGGGGGAGAGTGAATTCTGTTCCAGCATCTTATCG
GCAAATTACACTTGAGGAACTGATTGAGCAGACTCCTGATCCGGAGTTTG
GGCGAGAGGTGGGCGATATGTTTACTTATTCGACAGATCCGGGGTATGAC
GGCGGTGACAAGGAACTGTTGACGGCAGAGCACATACGCAATGCTGGAAT
TGAGTGTCCAATGACCAACTTGGAGGAGTGGATGCAAAAGGAGGATTGGT
CGTCTGTCTTAAATAGTTGAATGCCCCCCACCAAAACCCTCCTCATCATC
GGCATAACCGGCAACCAAGGCCACTCCATCGCCTCGCGCTTCCTGCACGA
CCCAACCTACCACATCATCGGCCTAACCCGCAACCCAACCTCGCCCATCG
CCCAATCCCTCTCCGCGCAAGGCATCGAGATCCTCCCCGCCGATCTCAAC
GACCCCACCACTCTCATCCCCGCCTTCCGCGGCGCGAACCTCATCTTCAG
TGTTACCAACTACTGGGAGCCGTTCTTCCGCGCAGACTGTCGCAAACAGG
CTGCGGAGCGGGGTATCTCGTGCCGACGGTACGCGTACGAGGTGGAGTTG
CAGCAGGGGAAGAATATTGCTGATGCGGCTGCCGCGACGGTGGACTCGTT
GGATGAGAATGGGTTTGTGGTGTCGACGTTGAGTCATGCGGCGGTGTGTA
GTGGGGGACGGTTTGGGGAGTTGTACCATTTTGATGCGAAGGCGGAGGTG
TTTCCGAATTATGTGAGGGAGAGGTATCCCAAGTTGGCGGGGAAGATGTC
GTGTGTACAGACGGGGTATTTCATGACGAGTTATAGGTTGGTTCCGGGGG
CTTATTTTAACAAGAAGACGACGGAGGAAGGGAAGGTGTCATTTGAGATG
ACTTTTACGACTGCGCCTGATGCCAAGGTTCCTCATTTGGATGTTAACGC
TGACTTAGGAAACTTTGTCTACGCGGTTTCGAAGATGCCACCTGGGAAGA
GCTATATGGCTTATGGGTCGTATTGTAGCTGGGCAGAGTATATGAGAATC
TGGGGGAGAGTGAATTCTGTTCCAGCATCTTATCGGCAAATTACACTTGA
GGAACTGATTGAGCAGACTCCTGATCCGGAGTTTGGGCGAGAGGTGGGCG
ATATGTTTACTTATTCGACAGATCCGGGGTATGACGGCGGTGACAAGGAA
CTGTTGACGGCAGAGCACATACGCAATGCTGGAATTGAGTGTCCAATGAC
CAACTTGGAGGAGTGGATGCAAAAGGAGGATTGGTCGTCTGTCTTAAATA
GTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1582997..1584148 + |
|
