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CBS51388_000542-T1, CBS51388_000542-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000542-T1
Unique NameCBS51388_000542-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1599653..1600771+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000542-T1 ID=CBS51388_000542-T1|Name=CBS51388_000542-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1119bp|location=Sequence derived from alignment at An01:1599653..1600771+ (Aspergillus niger CBS 513.88)
ATGTTTGATGTGCAAGGAAATGTACCAAATAGTCCTGACTGACATTTATC
TCTTTTGTATGGGTTGCTAAGTAGGCTTAGTATGCTCTGGTGGCAGGTGG
CTCCAAGGGTTTGGGAAGAGAAATCTCACTGGCGTTGGTAAAGCGAGGTA
CGTCGAAGGACTGCACCGAGAGCTCTTAAGCGTTGCCACTGACTCTTTGC
TATCAGGAGCTCACGTGACAGTGATTGCGCGCTCTCAAGATGCATTGGAT
AGGATCAAAGTGGACATGGAAGCGGTACGCGTGCATGGCGATCAAGTCAT
CGGTATCCAGAGCTTGGATTTGACCAATAGTGAAGAAGTTTGTACAATTG
AATTGCGAGTCTATCTCAACGAAACTTTCACTGATGAGATATACTGCTTG
GCTAGGTGTCCAGATTTGTCCAGACATTTGGAAACAAGATCACCGCTCTG
TTCTGTACCGCAGGTGGCACGGACGAAGAGGTGGGCCACTTTGTGGACAT
CCCTGCGACCTCAATTCAGAGCTGCATGGAGAAGAATTATCTTACAGCAG
CGTTTGTTGCTCAGGCTGTCATGGGGACATGGACGACTGAGTTGAAGCGG
GTAGGAGAGTGCGACGGTGCCCAGAAATCTCGCCACATTGTTTTCACTGC
TTCCACAGCAGCCCTCGTCGCTGTCCCAGGATACGCTGCATACTCACCAT
CAAAGGCAGCGATCCGAGCATTGGCCGATTCCTTGAGGCAGGAAAGTCTC
ATGTACCCCCCTGCTGGGGCGATACAAGTTCACTGTAGCTTCCCTGGGAC
ATTTTACACGGACAGCTTCTATAGAGAACAGGCGCGGAAGCCGCAATTAT
GCAAAGAAATTGAAGGAACTGTTAATGATGGTGGTGGGTTGACAGCCAAA
GATGTTGCTCAGCGTGTTCTTGTTGGACTTGATTCGGGGTGTTACTTCAT
ACCCACGGATCTGCAAACCCGGTTGCTCCTGAATAACATGCGAGGTCCCA
GCCCACGGGACTACCCATTACTTGACTGGTGCATGGGCTGGGCTGCCTCG
TTGGTCTGGCCAATTATAGGAACTTATCTAGACTGGAAGGTAGCAAGGTC
TGGCGGCGGAACTGTATAA
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Coding sequence (CDS) from alignment at An01:1599653..1600771+

>CBS51388_000542-T1 ID=CBS51388_000542-T1|Name=CBS51388_000542-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3732bp|location=Sequence derived from alignment at An01:1599653..1600771+ (Aspergillus niger CBS 513.88)
ATGTTTGATGTGCAAGGAAATTATGCTCTGGTGGCAGGTGGCTCCAAGGG
TTTGGGAAGAGAAATCTCACTGGCGTTGGTAAAGCGAGGAGCTCACGTGA
CAGTGATTGCGCGCTCTCAAGATGCATTGGATAGGATCAAAGTGGACATG
GAAGCGGTACGCGTGCATGGCGATCAAGTCATCGGTATCCAGAGCTTGGA
TTTGACCAATAGTGAAGAAGTGTCCAGATTTGTCCAGACATTTGGAAACA
AGATCACCGCTCTGTTCTGTACCGCAGGTGGCACGGACGAAGAGGTGGGC
CACTTTGTGGACATCCCTGCGACCTCAATTCAGAGCTGCATGGAGAAGAA
TTATCTTACAGCAGCGTTTGTTGCTCAGGCTGTCATGGGGACATGGACGA
CTGAGTTGAAGCGGGTAGGAGAGTGCGACGGTGCCCAGAAATCTCGCCAC
ATTGTTTTCACTGCTTCCACAGCAGCCCTCGTCGCTGTCCCAGGATACGC
TGCATACTCACCATCAAAGGCAGCGATCCGAGCATTGGCCGATTCCTTGA
GGCAGGAAAGTCTCATGTACCCCCCTGCTGGGGCGATACAAGTTCACTGT
AGCTTCCCTGGGACATTTTACACGGACAGCTTCTATAGAGAACAGGCGCG
GAAGCCGCAATTATGCAAAGAAATTGAAGGAACTGTTAATGATGGTGGTG
GGTTGACAGCCAAAGATGTTGCTCAGCGTGTTCTTGTTGGACTTGATTCG
GGGTGTTACTTCATACCCACGGATCTGCAAACCCGGTTGCTCCTGAATAA
CATGCGAGGTCCCAGCCCACGGGACTACCCATTACTTGACTGGTGCATGG
GCTGGGCTGCCTCGTTGGTCTGGCCAATTATAGGAACTTATCTAGACTGG
AAGGTAGCAAGGTCTGGCGGCGGAACTGTATAAATGTTTGATGTGCAAGG
AAATTATGCTCTGGTGGCAGGTGGCTCCAAGGGTTTGGGAAGAGAAATCT
CACTGGCGTTGGTAAAGCGAGGAGCTCACGTGACAGTGATTGCGCGCTCT
CAAGATGCATTGGATAGGATCAAAGTGGACATGGAAGCGGTACGCGTGCA
TGGCGATCAAGTCATCGGTATCCAGAGCTTGGATTTGACCAATAGTGAAG
AAGTGTCCAGATTTGTCCAGACATTTGGAAACAAGATCACCGCTCTGTTC
TGTACCGCAGGTGGCACGGACGAAGAGGTGGGCCACTTTGTGGACATCCC
TGCGACCTCAATTCAGAGCTGCATGGAGAAGAATTATCTTACAGCAGCGT
TTGTTGCTCAGGCTGTCATGGGGACATGGACGACTGAGTTGAAGCGGGTA
GGAGAGTGCGACGGTGCCCAGAAATCTCGCCACATTGTTTTCACTGCTTC
CACAGCAGCCCTCGTCGCTGTCCCAGGATACGCTGCATACTCACCATCAA
AGGCAGCGATCCGAGCATTGGCCGATTCCTTGAGGCAGGAAAGTCTCATG
TACCCCCCTGCTGGGGCGATACAAGTTCACTGTAGCTTCCCTGGGACATT
TTACACGGACAGCTTCTATAGAGAACAGGCGCGGAAGCCGCAATTATGCA
AAGAAATTGAAGGAACTGTTAATGATGGTGGTGGGTTGACAGCCAAAGAT
GTTGCTCAGCGTGTTCTTGTTGGACTTGATTCGGGGTGTTACTTCATACC
CACGGATCTGCAAACCCGGTTGCTCCTGAATAACATGCGAGGTCCCAGCC
CACGGGACTACCCATTACTTGACTGGTGCATGGGCTGGGCTGCCTCGTTG
GTCTGGCCAATTATAGGAACTTATCTAGACTGGAAGGTAGCAAGGTCTGG
CGGCGGAACTGTATAAATGTTTGATGTGCAAGGAAATTATGCTCTGGTGG
CAGGTGGCTCCAAGGGTTTGGGAAGAGAAATCTCACTGGCGTTGGTAAAG
CGAGGAGCTCACGTGACAGTGATTGCGCGCTCTCAAGATGCATTGGATAG
GATCAAAGTGGACATGGAAGCGGTACGCGTGCATGGCGATCAAGTCATCG
GTATCCAGAGCTTGGATTTGACCAATAGTGAAGAAGTGTCCAGATTTGTC
CAGACATTTGGAAACAAGATCACCGCTCTGTTCTGTACCGCAGGTGGCAC
GGACGAAGAGGTGGGCCACTTTGTGGACATCCCTGCGACCTCAATTCAGA
GCTGCATGGAGAAGAATTATCTTACAGCAGCGTTTGTTGCTCAGGCTGTC
ATGGGGACATGGACGACTGAGTTGAAGCGGGTAGGAGAGTGCGACGGTGC
CCAGAAATCTCGCCACATTGTTTTCACTGCTTCCACAGCAGCCCTCGTCG
CTGTCCCAGGATACGCTGCATACTCACCATCAAAGGCAGCGATCCGAGCA
TTGGCCGATTCCTTGAGGCAGGAAAGTCTCATGTACCCCCCTGCTGGGGC
GATACAAGTTCACTGTAGCTTCCCTGGGACATTTTACACGGACAGCTTCT
ATAGAGAACAGGCGCGGAAGCCGCAATTATGCAAAGAAATTGAAGGAACT
GTTAATGATGGTGGTGGGTTGACAGCCAAAGATGTTGCTCAGCGTGTTCT
TGTTGGACTTGATTCGGGGTGTTACTTCATACCCACGGATCTGCAAACCC
GGTTGCTCCTGAATAACATGCGAGGTCCCAGCCCACGGGACTACCCATTA
CTTGACTGGTGCATGGGCTGGGCTGCCTCGTTGGTCTGGCCAATTATAGG
AACTTATCTAGACTGGAAGGTAGCAAGGTCTGGCGGCGGAACTGTATAAA
TGTTTGATGTGCAAGGAAATTATGCTCTGGTGGCAGGTGGCTCCAAGGGT
TTGGGAAGAGAAATCTCACTGGCGTTGGTAAAGCGAGGAGCTCACGTGAC
AGTGATTGCGCGCTCTCAAGATGCATTGGATAGGATCAAAGTGGACATGG
AAGCGGTACGCGTGCATGGCGATCAAGTCATCGGTATCCAGAGCTTGGAT
TTGACCAATAGTGAAGAAGTGTCCAGATTTGTCCAGACATTTGGAAACAA
GATCACCGCTCTGTTCTGTACCGCAGGTGGCACGGACGAAGAGGTGGGCC
ACTTTGTGGACATCCCTGCGACCTCAATTCAGAGCTGCATGGAGAAGAAT
TATCTTACAGCAGCGTTTGTTGCTCAGGCTGTCATGGGGACATGGACGAC
TGAGTTGAAGCGGGTAGGAGAGTGCGACGGTGCCCAGAAATCTCGCCACA
TTGTTTTCACTGCTTCCACAGCAGCCCTCGTCGCTGTCCCAGGATACGCT
GCATACTCACCATCAAAGGCAGCGATCCGAGCATTGGCCGATTCCTTGAG
GCAGGAAAGTCTCATGTACCCCCCTGCTGGGGCGATACAAGTTCACTGTA
GCTTCCCTGGGACATTTTACACGGACAGCTTCTATAGAGAACAGGCGCGG
AAGCCGCAATTATGCAAAGAAATTGAAGGAACTGTTAATGATGGTGGTGG
GTTGACAGCCAAAGATGTTGCTCAGCGTGTTCTTGTTGGACTTGATTCGG
GGTGTTACTTCATACCCACGGATCTGCAAACCCGGTTGCTCCTGAATAAC
ATGCGAGGTCCCAGCCCACGGGACTACCCATTACTTGACTGGTGCATGGG
CTGGGCTGCCTCGTTGGTCTGGCCAATTATAGGAACTTATCTAGACTGGA
AGGTAGCAAGGTCTGGCGGCGGAACTGTATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000542CBS51388_000542Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000542-T1.exon1CBS51388_000542-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000542-T1.exon2CBS51388_000542-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000542-T1.exon3CBS51388_000542-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000542-T1.exon4CBS51388_000542-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000542-T1.cdsCBS51388_000542-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000542-T1CBS51388_000542-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1599653..1600771 +
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