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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1736104..1736780+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000588-T1 ID=CBS51388_000588-T1|Name=CBS51388_000588-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=677bp|location=Sequence derived from alignment at An01:1736104..1736780+ (Aspergillus niger CBS 513.88)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGGTAAGTGCTATTCTACTTATAGTCATA
GGAGACTCATTTCGCTGACGTATTCCTATCGCTGCAACTTAGAGTCATGC
TCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGG
AACTATTCTCGGCCCCCCTCACGTTCGTCCCACGCCTCCGACTCGCATCC
GTTATACTATACAATAGCATCACTGACATAATGAACGAGCGCAGAGTGTC
CATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCC
CGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCG
TTGATGGCCGGAGCGGAAAGGTAAGGATTCGTCCTATCCCGACCGCTACT
ATATGAAAGATTCCAAGTTGACTTCAAGCTAGGTCGATCCTACCAAGCTG
CCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGT
CGAGCTCAGAAGGTAATTATGTCCTGGCCTTCAGGCCATCGGTGACTTGA
TACTAATAGTTCCTAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCC
CAGCCTCCGGAAGGCTCGAACTTCTAA back to topCoding sequence (CDS) from alignment at An01:1736104..1736780+ >CBS51388_000588-T1 ID=CBS51388_000588-T1|Name=CBS51388_000588-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2100bp|location=Sequence derived from alignment at An01:1736104..1736780+ (Aspergillus niger CBS 513.88)
ATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAA
GGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATG
GTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCTCGGCCCCCCT
CACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCC
GGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACT
TGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCC
TGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGA
GCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTC
CGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGA
CTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATG
CTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACG
GAACTATTCTCGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGC
GTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCA
ATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGG
TCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACC
ATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCA
CAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTA
AAGTGCCCAGAAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAG
GGTCTGGGAGCTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACAT
GATGATGAGTAACTGGAACGGAACTATTCTCGGCCCCCCTCACAGTGTCC
ATGAGAACAGAATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCC
GACAACCCCCCTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGT
TGATGGCCGGAGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTC
AGTGGAAGCGCGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGA
TATATGGCTCTGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTC
GAACTTCTAAATGGCAGCTAAAGTGCCCAGAAACTTCAGACTGCTCGAAG
AGCTGGAGAAGGGTGAGAAGGGTCTGGGAGCTGAGTCATGCTCCTATGGT
CTTGCAGATGGTGAAGACATGATGATGAGTAACTGGAACGGAACTATTCT
CGGCCCCCCTCACAGTGTCCATGAGAACAGAATTTACAGCGTCAACATCC
ATTGCGGTCCGGACTATCCCGACAACCCCCCTACCATCCAATTCGTATCC
CGAGTCAACTTGCCATGCGTTGATGGCCGGAGCGGAAAGGTCGATCCTAC
CAAGCTGCCCTGCTTGGCTCAGTGGAAGCGCGACTATACCATGGAAACTA
TTCTAGTCGAGCTCAGAAGATATATGGCTCTGCCTCAGCACAAGAAGCTT
CCCCAGCCTCCGGAAGGCTCGAACTTCTAAATGGCAGCTAAAGTGCCCAG
AAACTTCAGACTGCTCGAAGAGCTGGAGAAGGGTGAGAAGGGTCTGGGAG
CTGAGTCATGCTCCTATGGTCTTGCAGATGGTGAAGACATGATGATGAGT
AACTGGAACGGAACTATTCTCGGCCCCCCTCACAGTGTCCATGAGAACAG
AATTTACAGCGTCAACATCCATTGCGGTCCGGACTATCCCGACAACCCCC
CTACCATCCAATTCGTATCCCGAGTCAACTTGCCATGCGTTGATGGCCGG
AGCGGAAAGGTCGATCCTACCAAGCTGCCCTGCTTGGCTCAGTGGAAGCG
CGACTATACCATGGAAACTATTCTAGTCGAGCTCAGAAGATATATGGCTC
TGCCTCAGCACAAGAAGCTTCCCCAGCCTCCGGAAGGCTCGAACTTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264UD3 |
| DBxref | InterPro:IPR000608 |
| DBxref | InterPro:IPR016135 |
| DBxref | PFAM:PF00179 |
| Product | Ubiquitin-conjugating enzyme spm2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1736104..1736780 + |
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