You are here

Home

CBS51388_000602-T1, CBS51388_000602-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000602-T1
Unique NameCBS51388_000602-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1769055..1772208+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000602-T1 ID=CBS51388_000602-T1|Name=CBS51388_000602-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3154bp|location=Sequence derived from alignment at An01:1769055..1772208+ (Aspergillus niger CBS 513.88)
ATGAAGAGTTTACGGCGAGACTTCTCGTCGAATCCGCAGGCAGCAAATGT
CACCAGCAAAGTCTTCGTGAGATCCACGAAAAGCGGAAAAGTTCAAAAGA
TCGTTCGCGAACTTTACCTCAGACAAGACATTCCTTGCTCGTCTAAGCTC
TGCTCGACTTGCGCATCTACTGCACCAGCAGATGCCAATGGAAACAGTGA
GACAAGCGGATCAGGATTTTGCTTCGCTTGATGGCTAATGCGACACAGTC
ACGCCTTTCGTGCTCTCGGAGCAGCCCGCGGGCACCAGCGCTTTCCCCCG
CGGGCACTATCTTGTCCCCGATACGAATGCATTGCTGAATGGCATGGATC
TTTTCGAACATACCGGAGCCTTCTACGATGTTATTATCCTCCAAACCGTC
CTCGAGGAACTGAAGAACCAGTCCCTGCCCCTCTACAACCGCCTGCTCTC
TCTGATCAAGACCGACGAAAAGCGGTTTTACCTTTTCTTCAACGAGTTTC
GACTGGAAACCCATGTCCGGAGAGGACCCGATGAGTCGATAAATGACAGG
AATGACCGAGCTGTGCGAACAGTGGCGAAGTGGTATGCGGAACATCTCAA
GACCACGGTGAAGAAGGGGAAGAAGAACGACATCCCGGCTATCGTTGTCA
TCACGGACGACAAGGAAAACTTGCGCAAAGCAAAGGAGGAGAGAGTAACA
GCATTGTCACTGTCAGACTATGTGGCCGGCCTAGAGGACTCAGACAGGCT
ACTTGACATGATCAACGAGTCTCGGGAGGCAAGGGAAGCGAAGGGCGCAC
GCGGCGAGCTTTTCTACCCCGAATACTACTCGATGTCCAAACTCATGACA
GGCATTAGAGCTGGAACTTTGCACCAGGGAGTCTTCAATGTTTCGCCGTA
CAACTATTTGGAGGGCTCTGTCAATGTCCCGGCATTCGACAAGCCCTTGC
TCATTTTGGGCCGCGACAACAGCAACAGAGCCATCTCTGGGGATGTTGTT
GTTATTGAAGTACTTCCCAAGGACCAATGGAAGTCGCCATCTACCAAGAT
CGTCGATGAAGAGGCGGTGACGAAGAATGACAATCCTGATACCGATGATA
CCGAGGCAGTGGTGTCGGAGAGGGAACGGAAGGCCTTGCAAGAAGAGGTC
AGGAAAGCCCATGGAAAGAGCTCAGAGGGAAAACCACAACCGACAGCCAA
GGTGGTTGGAGTCATGAAACGCAACTGGCGTCAATATGTCGGACATGTCG
ATGCCGGTTCGGCAGGTGCTCAGGCTAGCAGCGGTCGCCGCCAGCAGACC
GTCTTCGTCCTCCCTATGGACAAGCGTGTACCTAAGATCCGCGTCCGTAC
TAGACAAGCTGGTGATCTTATGGGTCAACGTATTCTTGTCACCATCGACG
CCTGGGACCGTGATTCCCGATACCCCACCGGCCATTTCATTCGCTCACTA
GGAGAACTGGAGACCAAGGGTGCGGAGACAGAGGCTCTGCTCCTTGAGTA
TGACGTTCAGTACAAGCCATTCCCGAAGGCTGTTCTCGACTGTCTTCCCG
CCGAGGGCCATGACTGGAGGGTACCGGCTAGCAAGGATAATATCGGCTGG
AAGGGACGAAGGGACCTTAGAGATCTCCTTATCTGCAGTATCGACCCGCC
AGGCTGTCAAGATATCGATGACGCGCTTCATGCACGACCATTACCGAACG
GCAACTTTGAAGTCGGTGTCCACATTGCAGATGTGTCTCATTTCGTCAAG
CCGAACAATGCAATGGACCTGGAGGCCAGTCTCCGTGGAACAACAGTCTA
CCTAGTCGACAAGCGTATCGATATGCTGCCCCATCTTCTCGGTACAGACC
TTTGTTCTCTCAAGCCCTACGTTGAGCGATACGCCTTCTCCGTTTTGTGG
GAGATGACACCCGACGCAGAAGTCGTTTCCGCAGATTTCACCAAATCCGT
CATCCGTTCTCGCGAAGCCTTCAGTTACGAAAAGGCGCAGAAGCGCATCG
ACGATCCTACGCAGAAAGACGAACTTACCGAAAGCATGCGCACTCTGCTC
CGCTTCTCTAAGATCCTCCGACAGAAGCGTATGGACGCAGGTGCGCTGAA
CCTCGCCTCGCCAGAAGTCCGGATTGAAACCGACAACGACGAAGTCGGCG
ACCCTCTCACGGACGTGAAGACGAAGGCCATGCTCGAGACCAACAGCCTC
GTTGAGGAATTCATGCTTCACGCCAACATTACCGTTGCTTCCAAGATCTA
CAGCACCTTCTCCCAGACCGCCATGCTCCGACGCCACGCCACCCCTCCTC
CGCAAAACTTCGAAGAGCTTATCAACCAACTCACCAAGAAGCGCGACATG
AGACTGGATGTGTCCAGCTCCCGTGCTCTCGCCGACTCCCTTGACCGTTG
TGTCGACGAGAAGAACCCCTTCTTCAACACCTTGGTCCGCATTCTCGCCA
CCCGTTGCATGACTTCCGCGGAGTACTTCTGCGCAGGGGCCCACGCAGAG
TCCGAATTCCGTCATTACGGTCTAGCCTCACCCATCTACACACACTTCAC
CTCCCCCATCAGACGTTACGCAGATCTCTTAGTCCACCGCCAACTCGCGT
CAGCAATTGGCTACGAGGGCGAAGATGGCCGCGCCGTCGTAGAGGGAGTG
ATGACCCGAAACAGACTCGAAGATATCTGCCGGAACATCAACTACCGTCA
TCGCAATGCCCAGTTCGCCGGCCGCGCCAGCATCGAATATTACGTTGGAC
AGGCGCTCAAGGCACGCGGAGAGAAGATGGCAGCCGATGGCGTGGACGGC
GGCATCGAAGAGGAGGGCTACGTCATGCGTGTCTTCGAGAACGGCGTCGT
TGTTTTCGTTCCGCGGTTTGGTATCGAGGGCGTGGTTCGCTTGGAGGATT
TCGTCCTTCCGGATGACGCTGCTCTCCGCACCGTCGACGAGCGACGGGAG
CTGGTGACGCGCCGACAGAGTGACTTCGACAATGAAGAGTACACTCTCCG
CGTTTCCAACAAAGGGAACTCCGAATCGCAACCCAGCATGGGCGTGGAAC
TGTTCCAGAAGGTCAACGTCAACGTTAGCTCTGTGAAAGAAGAAGGTGGT
CGCGGCGCAGGAAAGAGGCGGGTTAGAATCCTGATTCTGGGAAGCGATGC
CTAG
back to top

Coding sequence (CDS) from alignment at An01:1769055..1772208+

>CBS51388_000602-T1 ID=CBS51388_000602-T1|Name=CBS51388_000602-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6204bp|location=Sequence derived from alignment at An01:1769055..1772208+ (Aspergillus niger CBS 513.88)
ATGAAGAGTTTACGGCGAGACTTCTCGTCGAATCCGCAGGCAGCAAATGT
CACCAGCAAAGTCTTCGTGAGATCCACGAAAAGCGGAAAAGTTCAAAAGA
TCGTTCGCGAACTTTACCTCAGACAAGACATTCCTTGCTCGTCTAAGCTC
TGCTCGACTTGCGCATCTACTGCACCAGCAGATGCCAATGGAAACATCAC
GCCTTTCGTGCTCTCGGAGCAGCCCGCGGGCACCAGCGCTTTCCCCCGCG
GGCACTATCTTGTCCCCGATACGAATGCATTGCTGAATGGCATGGATCTT
TTCGAACATACCGGAGCCTTCTACGATGTTATTATCCTCCAAACCGTCCT
CGAGGAACTGAAGAACCAGTCCCTGCCCCTCTACAACCGCCTGCTCTCTC
TGATCAAGACCGACGAAAAGCGGTTTTACCTTTTCTTCAACGAGTTTCGA
CTGGAAACCCATGTCCGGAGAGGACCCGATGAGTCGATAAATGACAGGAA
TGACCGAGCTGTGCGAACAGTGGCGAAGTGGTATGCGGAACATCTCAAGA
CCACGGTGAAGAAGGGGAAGAAGAACGACATCCCGGCTATCGTTGTCATC
ACGGACGACAAGGAAAACTTGCGCAAAGCAAAGGAGGAGAGAGTAACAGC
ATTGTCACTGTCAGACTATGTGGCCGGCCTAGAGGACTCAGACAGGCTAC
TTGACATGATCAACGAGTCTCGGGAGGCAAGGGAAGCGAAGGGCGCACGC
GGCGAGCTTTTCTACCCCGAATACTACTCGATGTCCAAACTCATGACAGG
CATTAGAGCTGGAACTTTGCACCAGGGAGTCTTCAATGTTTCGCCGTACA
ACTATTTGGAGGGCTCTGTCAATGTCCCGGCATTCGACAAGCCCTTGCTC
ATTTTGGGCCGCGACAACAGCAACAGAGCCATCTCTGGGGATGTTGTTGT
TATTGAAGTACTTCCCAAGGACCAATGGAAGTCGCCATCTACCAAGATCG
TCGATGAAGAGGCGGTGACGAAGAATGACAATCCTGATACCGATGATACC
GAGGCAGTGGTGTCGGAGAGGGAACGGAAGGCCTTGCAAGAAGAGGTCAG
GAAAGCCCATGGAAAGAGCTCAGAGGGAAAACCACAACCGACAGCCAAGG
TGGTTGGAGTCATGAAACGCAACTGGCGTCAATATGTCGGACATGTCGAT
GCCGGTTCGGCAGGTGCTCAGGCTAGCAGCGGTCGCCGCCAGCAGACCGT
CTTCGTCCTCCCTATGGACAAGCGTGTACCTAAGATCCGCGTCCGTACTA
GACAAGCTGGTGATCTTATGGGTCAACGTATTCTTGTCACCATCGACGCC
TGGGACCGTGATTCCCGATACCCCACCGGCCATTTCATTCGCTCACTAGG
AGAACTGGAGACCAAGGGTGCGGAGACAGAGGCTCTGCTCCTTGAGTATG
ACGTTCAGTACAAGCCATTCCCGAAGGCTGTTCTCGACTGTCTTCCCGCC
GAGGGCCATGACTGGAGGGTACCGGCTAGCAAGGATAATATCGGCTGGAA
GGGACGAAGGGACCTTAGAGATCTCCTTATCTGCAGTATCGACCCGCCAG
GCTGTCAAGATATCGATGACGCGCTTCATGCACGACCATTACCGAACGGC
AACTTTGAAGTCGGTGTCCACATTGCAGATGTGTCTCATTTCGTCAAGCC
GAACAATGCAATGGACCTGGAGGCCAGTCTCCGTGGAACAACAGTCTACC
TAGTCGACAAGCGTATCGATATGCTGCCCCATCTTCTCGGTACAGACCTT
TGTTCTCTCAAGCCCTACGTTGAGCGATACGCCTTCTCCGTTTTGTGGGA
GATGACACCCGACGCAGAAGTCGTTTCCGCAGATTTCACCAAATCCGTCA
TCCGTTCTCGCGAAGCCTTCAGTTACGAAAAGGCGCAGAAGCGCATCGAC
GATCCTACGCAGAAAGACGAACTTACCGAAAGCATGCGCACTCTGCTCCG
CTTCTCTAAGATCCTCCGACAGAAGCGTATGGACGCAGGTGCGCTGAACC
TCGCCTCGCCAGAAGTCCGGATTGAAACCGACAACGACGAAGTCGGCGAC
CCTCTCACGGACGTGAAGACGAAGGCCATGCTCGAGACCAACAGCCTCGT
TGAGGAATTCATGCTTCACGCCAACATTACCGTTGCTTCCAAGATCTACA
GCACCTTCTCCCAGACCGCCATGCTCCGACGCCACGCCACCCCTCCTCCG
CAAAACTTCGAAGAGCTTATCAACCAACTCACCAAGAAGCGCGACATGAG
ACTGGATGTGTCCAGCTCCCGTGCTCTCGCCGACTCCCTTGACCGTTGTG
TCGACGAGAAGAACCCCTTCTTCAACACCTTGGTCCGCATTCTCGCCACC
CGTTGCATGACTTCCGCGGAGTACTTCTGCGCAGGGGCCCACGCAGAGTC
CGAATTCCGTCATTACGGTCTAGCCTCACCCATCTACACACACTTCACCT
CCCCCATCAGACGTTACGCAGATCTCTTAGTCCACCGCCAACTCGCGTCA
GCAATTGGCTACGAGGGCGAAGATGGCCGCGCCGTCGTAGAGGGAGTGAT
GACCCGAAACAGACTCGAAGATATCTGCCGGAACATCAACTACCGTCATC
GCAATGCCCAGTTCGCCGGCCGCGCCAGCATCGAATATTACGTTGGACAG
GCGCTCAAGGCACGCGGAGAGAAGATGGCAGCCGATGGCGTGGACGGCGG
CATCGAAGAGGAGGGCTACGTCATGCGTGTCTTCGAGAACGGCGTCGTTG
TTTTCGTTCCGCGGTTTGGTATCGAGGGCGTGGTTCGCTTGGAGGATTTC
GTCCTTCCGGATGACGCTGCTCTCCGCACCGTCGACGAGCGACGGGAGCT
GGTGACGCGCCGACAGAGTGACTTCGACAATGAAGAGTACACTCTCCGCG
TTTCCAACAAAGGGAACTCCGAATCGCAACCCAGCATGGGCGTGGAACTG
TTCCAGAAGGTCAACGTCAACGTTAGCTCTGTGAAAGAAGAAGGTGGTCG
CGGCGCAGGAAAGAGGCGGGTTAGAATCCTGATTCTGGGAAGCGATGCCT
AGATGAAGAGTTTACGGCGAGACTTCTCGTCGAATCCGCAGGCAGCAAAT
GTCACCAGCAAAGTCTTCGTGAGATCCACGAAAAGCGGAAAAGTTCAAAA
GATCGTTCGCGAACTTTACCTCAGACAAGACATTCCTTGCTCGTCTAAGC
TCTGCTCGACTTGCGCATCTACTGCACCAGCAGATGCCAATGGAAACATC
ACGCCTTTCGTGCTCTCGGAGCAGCCCGCGGGCACCAGCGCTTTCCCCCG
CGGGCACTATCTTGTCCCCGATACGAATGCATTGCTGAATGGCATGGATC
TTTTCGAACATACCGGAGCCTTCTACGATGTTATTATCCTCCAAACCGTC
CTCGAGGAACTGAAGAACCAGTCCCTGCCCCTCTACAACCGCCTGCTCTC
TCTGATCAAGACCGACGAAAAGCGGTTTTACCTTTTCTTCAACGAGTTTC
GACTGGAAACCCATGTCCGGAGAGGACCCGATGAGTCGATAAATGACAGG
AATGACCGAGCTGTGCGAACAGTGGCGAAGTGGTATGCGGAACATCTCAA
GACCACGGTGAAGAAGGGGAAGAAGAACGACATCCCGGCTATCGTTGTCA
TCACGGACGACAAGGAAAACTTGCGCAAAGCAAAGGAGGAGAGAGTAACA
GCATTGTCACTGTCAGACTATGTGGCCGGCCTAGAGGACTCAGACAGGCT
ACTTGACATGATCAACGAGTCTCGGGAGGCAAGGGAAGCGAAGGGCGCAC
GCGGCGAGCTTTTCTACCCCGAATACTACTCGATGTCCAAACTCATGACA
GGCATTAGAGCTGGAACTTTGCACCAGGGAGTCTTCAATGTTTCGCCGTA
CAACTATTTGGAGGGCTCTGTCAATGTCCCGGCATTCGACAAGCCCTTGC
TCATTTTGGGCCGCGACAACAGCAACAGAGCCATCTCTGGGGATGTTGTT
GTTATTGAAGTACTTCCCAAGGACCAATGGAAGTCGCCATCTACCAAGAT
CGTCGATGAAGAGGCGGTGACGAAGAATGACAATCCTGATACCGATGATA
CCGAGGCAGTGGTGTCGGAGAGGGAACGGAAGGCCTTGCAAGAAGAGGTC
AGGAAAGCCCATGGAAAGAGCTCAGAGGGAAAACCACAACCGACAGCCAA
GGTGGTTGGAGTCATGAAACGCAACTGGCGTCAATATGTCGGACATGTCG
ATGCCGGTTCGGCAGGTGCTCAGGCTAGCAGCGGTCGCCGCCAGCAGACC
GTCTTCGTCCTCCCTATGGACAAGCGTGTACCTAAGATCCGCGTCCGTAC
TAGACAAGCTGGTGATCTTATGGGTCAACGTATTCTTGTCACCATCGACG
CCTGGGACCGTGATTCCCGATACCCCACCGGCCATTTCATTCGCTCACTA
GGAGAACTGGAGACCAAGGGTGCGGAGACAGAGGCTCTGCTCCTTGAGTA
TGACGTTCAGTACAAGCCATTCCCGAAGGCTGTTCTCGACTGTCTTCCCG
CCGAGGGCCATGACTGGAGGGTACCGGCTAGCAAGGATAATATCGGCTGG
AAGGGACGAAGGGACCTTAGAGATCTCCTTATCTGCAGTATCGACCCGCC
AGGCTGTCAAGATATCGATGACGCGCTTCATGCACGACCATTACCGAACG
GCAACTTTGAAGTCGGTGTCCACATTGCAGATGTGTCTCATTTCGTCAAG
CCGAACAATGCAATGGACCTGGAGGCCAGTCTCCGTGGAACAACAGTCTA
CCTAGTCGACAAGCGTATCGATATGCTGCCCCATCTTCTCGGTACAGACC
TTTGTTCTCTCAAGCCCTACGTTGAGCGATACGCCTTCTCCGTTTTGTGG
GAGATGACACCCGACGCAGAAGTCGTTTCCGCAGATTTCACCAAATCCGT
CATCCGTTCTCGCGAAGCCTTCAGTTACGAAAAGGCGCAGAAGCGCATCG
ACGATCCTACGCAGAAAGACGAACTTACCGAAAGCATGCGCACTCTGCTC
CGCTTCTCTAAGATCCTCCGACAGAAGCGTATGGACGCAGGTGCGCTGAA
CCTCGCCTCGCCAGAAGTCCGGATTGAAACCGACAACGACGAAGTCGGCG
ACCCTCTCACGGACGTGAAGACGAAGGCCATGCTCGAGACCAACAGCCTC
GTTGAGGAATTCATGCTTCACGCCAACATTACCGTTGCTTCCAAGATCTA
CAGCACCTTCTCCCAGACCGCCATGCTCCGACGCCACGCCACCCCTCCTC
CGCAAAACTTCGAAGAGCTTATCAACCAACTCACCAAGAAGCGCGACATG
AGACTGGATGTGTCCAGCTCCCGTGCTCTCGCCGACTCCCTTGACCGTTG
TGTCGACGAGAAGAACCCCTTCTTCAACACCTTGGTCCGCATTCTCGCCA
CCCGTTGCATGACTTCCGCGGAGTACTTCTGCGCAGGGGCCCACGCAGAG
TCCGAATTCCGTCATTACGGTCTAGCCTCACCCATCTACACACACTTCAC
CTCCCCCATCAGACGTTACGCAGATCTCTTAGTCCACCGCCAACTCGCGT
CAGCAATTGGCTACGAGGGCGAAGATGGCCGCGCCGTCGTAGAGGGAGTG
ATGACCCGAAACAGACTCGAAGATATCTGCCGGAACATCAACTACCGTCA
TCGCAATGCCCAGTTCGCCGGCCGCGCCAGCATCGAATATTACGTTGGAC
AGGCGCTCAAGGCACGCGGAGAGAAGATGGCAGCCGATGGCGTGGACGGC
GGCATCGAAGAGGAGGGCTACGTCATGCGTGTCTTCGAGAACGGCGTCGT
TGTTTTCGTTCCGCGGTTTGGTATCGAGGGCGTGGTTCGCTTGGAGGATT
TCGTCCTTCCGGATGACGCTGCTCTCCGCACCGTCGACGAGCGACGGGAG
CTGGTGACGCGCCGACAGAGTGACTTCGACAATGAAGAGTACACTCTCCG
CGTTTCCAACAAAGGGAACTCCGAATCGCAACCCAGCATGGGCGTGGAAC
TGTTCCAGAAGGTCAACGTCAACGTTAGCTCTGTGAAAGAAGAAGGTGGT
CGCGGCGCAGGAAAGAGGCGGGTTAGAATCCTGATTCTGGGAAGCGATGC
CTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004540ribonuclease activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000602CBS51388_000602Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000602-T1.exon1CBS51388_000602-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000602-T1.exon2CBS51388_000602-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000602-T1.cdsCBS51388_000602-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000602-T1CBS51388_000602-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260AQB
DBxrefInterPro:IPR029060
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR022966
DBxrefInterPro:IPR033770
DBxrefInterPro:IPR033771
DBxrefInterPro:IPR041505
DBxrefInterPro:IPR001900
DBxrefInterPro:IPR002716
DBxrefPFAM:PF17215
DBxrefPFAM:PF17216
DBxrefPFAM:PF00773
DBxrefPFAM:PF13638
DBxrefPFAM:PF17849
DBxrefPFAM:PF17876
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1769055..1772208 +
Powered by Drupal