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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1788206..1789810+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000609-T1 ID=CBS51388_000609-T1|Name=CBS51388_000609-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1605bp|location=Sequence derived from alignment at An01:1788206..1789810+ (Aspergillus niger CBS 513.88)
ATGTCGCTGTCTTCACAATCCTCTGGCCCTTTTCGGGTCGTTGAGCATAT
CGTCGAATGCCAACATATCAGGGAGTATCCCGCGGCGACGGCAAATGGCC
AAGAAGATGTATTGAATTTGGTGGTAAAACAATATATCCCACTCGATAAT
CCCAACCCACAGCCAGGGGATGTAACGATTCTTGCTGCGCATGCGAATGG
GTTTCCTAAGGTTTGAGGGCATCACATCACTGAGTTCGAATGAACGTAGC
TAATCTATATACTAGGAGCTTTACGAACCTCTATGGGAGGAACTGTACGC
TCGATCAAAAGCCAATGGCTTCCGAATCAGAAGTATATGGATGGCGGATG
TCGCGCACCAGGGCGAGAGCAGCGTTGTAAATGAGGATCTCCTGGGCAAC
GACCGTATGGAATTGATCTTCATTGCTCATCACTCCTCGAATTGATGCTG
ACGAGGTGCATATAGCCAGCTGGTTCGACCACCCCAGAGACCTCCTTCAC
CTTATCAACGTCAAGCGCAAAGAGATGCCTCGCCCCATCGTCGGGATAGG
CCACAGTATGGGCGGTGCACATCTGTATGCCCCCCCCCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACCACGAAC
TAAAACCTAACACCTCCCACAGCGCCCAGCTATGCCTAATGCACCCACGT
CTCATCCACAGCTTAGTCCTTCTGGATCCCGTAATACAGCGTGAATCCAC
CCAGCTCGACGGGCTCGAAATGGCCATGCGACATAGACAACGGATCGCCA
AAACAACCCAATTATCCACCTACCGACGGGACACATGGCCATCCCGTAAA
ACCGCTGCGGAGGCCTTCAAGAAAAACCCGTTCTACCTAGCCTGGGATTC
CCGCGTCCTCGACCGCTGGATCGAGCACGGTCTCCGCGAGCTCCCCACGG
CCATTCACCCTCTGGACGAATCCCAGCAAAAGGAGGGAAGCAACGACCGC
CCCGTCACTCTGAGAACAACCCTTCACCAAGAAGTCTTCACCTTCTCTCG
TCCCAACTACGATGGTCCCCCGGGAAAAAAGGTTCCCGTGAACAAAGTGA
CTCACCCGGATCTAAATCCCGAACATCTAGGTTCATGGCCCTTTTACCGG
CCAGAACCGTCGCGAGTGTTCGCTATGCTCCCGCACCTCCGTCCTAGCGT
CTGCTACGTTTTCGGAGGGAAATCGGATATGTGCTTGCCTGATATGATGG
CGGATAAGATGGCTGCTACAGGAACGGGGCTGGGAGGTAGTGGTGGGGCC
CCTGCTGGTCGGGTGCGCGATGTTTATCTTGCCGAATATGGCCACCTGCT
TGCTCAGGAGGCTCCCAAAGAGTGTGCTGAGGCAGCGGGTAAATGGCTCG
GTGCTGAATTAGAGCGATGGAGAACTGAGGAGCGAGAGTTCCAGGAACAG
TGGAGTCGGAAGTCAAAGGTCGAGAAAGTCACAATTGATTCTCGGTGGAA
GGACCATGTTCCGCGTCCAGAGCGGCCGAAGAAGCCTGCTCAGTCGAAGC
TGTGA back to topCoding sequence (CDS) from alignment at An01:1788206..1789810+ >CBS51388_000609-T1 ID=CBS51388_000609-T1|Name=CBS51388_000609-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5364bp|location=Sequence derived from alignment at An01:1788206..1789810+ (Aspergillus niger CBS 513.88)
ATGTCGCTGTCTTCACAATCCTCTGGCCCTTTTCGGGTCGTTGAGCATAT
CGTCGAATGCCAACATATCAGGGAGTATCCCGCGGCGACGGCAAATGGCC
AAGAAGATGTATTGAATTTGGTGGTAAAACAATATATCCCACTCGATAAT
CCCAACCCACAGCCAGGGGATGTAACGATTCTTGCTGCGCATGCGAATGG
GTTTCCTAAGGAGCTTTACGAACCTCTATGGGAGGAACTGTACGCTCGAT
CAAAAGCCAATGGCTTCCGAATCAGAAGTATATGGATGGCGGATGTCGCG
CACCAGGGCGAGAGCAGCGTTGTAAATGAGGATCTCCTGGGCAACGACCC
CAGCTGGTTCGACCACCCCAGAGACCTCCTTCACCTTATCAACGTCAAGC
GCAAAGAGATGCCTCGCCCCATCGTCGGGATAGGCCACAGTATGGGCGGT
GCACATCTCGCCCAGCTATGCCTAATGCACCCACGTCTCATCCACAGCTT
AGTCCTTCTGGATCCCGTAATACAGCGTGAATCCACCCAGCTCGACGGGC
TCGAAATGGCCATGCGACATAGACAACGGATCGCCAAAACAACCCAATTA
TCCACCTACCGACGGGACACATGGCCATCCCGTAAAACCGCTGCGGAGGC
CTTCAAGAAAAACCCGTTCTACCTAGCCTGGGATTCCCGCGTCCTCGACC
GCTGGATCGAGCACGGTCTCCGCGAGCTCCCCACGGCCATTCACCCTCTG
GACGAATCCCAGCAAAAGGAGGGAAGCAACGACCGCCCCGTCACTCTGAG
AACAACCCTTCACCAAGAAGTCTTCACCTTCTCTCGTCCCAACTACGATG
GTCCCCCGGGAAAAAAGGTTCCCGTGAACAAAGTGACTCACCCGGATCTA
AATCCCGAACATCTAGGTTCATGGCCCTTTTACCGGCCAGAACCGTCGCG
AGTGTTCGCTATGCTCCCGCACCTCCGTCCTAGCGTCTGCTACGTTTTCG
GAGGGAAATCGGATATGTGCTTGCCTGATATGATGGCGGATAAGATGGCT
GCTACAGGAACGGGGCTGGGAGGTAGTGGTGGGGCCCCTGCTGGTCGGGT
GCGCGATGTTTATCTTGCCGAATATGGCCACCTGCTTGCTCAGGAGGCTC
CCAAAGAGTGTGCTGAGGCAGCGGGTAAATGGCTCGGTGCTGAATTAGAG
CGATGGAGAACTGAGGAGCGAGAGTTCCAGGAACAGTGGAGTCGGAAGTC
AAAGGTCGAGAAAGTCACAATTGATTCTCGGTGGAAGGACCATGTTCCGC
GTCCAGAGCGGCCGAAGAAGCCTGCTCAGTCGAAGCTGTGAATGTCGCTG
TCTTCACAATCCTCTGGCCCTTTTCGGGTCGTTGAGCATATCGTCGAATG
CCAACATATCAGGGAGTATCCCGCGGCGACGGCAAATGGCCAAGAAGATG
TATTGAATTTGGTGGTAAAACAATATATCCCACTCGATAATCCCAACCCA
CAGCCAGGGGATGTAACGATTCTTGCTGCGCATGCGAATGGGTTTCCTAA
GGAGCTTTACGAACCTCTATGGGAGGAACTGTACGCTCGATCAAAAGCCA
ATGGCTTCCGAATCAGAAGTATATGGATGGCGGATGTCGCGCACCAGGGC
GAGAGCAGCGTTGTAAATGAGGATCTCCTGGGCAACGACCCCAGCTGGTT
CGACCACCCCAGAGACCTCCTTCACCTTATCAACGTCAAGCGCAAAGAGA
TGCCTCGCCCCATCGTCGGGATAGGCCACAGTATGGGCGGTGCACATCTC
GCCCAGCTATGCCTAATGCACCCACGTCTCATCCACAGCTTAGTCCTTCT
GGATCCCGTAATACAGCGTGAATCCACCCAGCTCGACGGGCTCGAAATGG
CCATGCGACATAGACAACGGATCGCCAAAACAACCCAATTATCCACCTAC
CGACGGGACACATGGCCATCCCGTAAAACCGCTGCGGAGGCCTTCAAGAA
AAACCCGTTCTACCTAGCCTGGGATTCCCGCGTCCTCGACCGCTGGATCG
AGCACGGTCTCCGCGAGCTCCCCACGGCCATTCACCCTCTGGACGAATCC
CAGCAAAAGGAGGGAAGCAACGACCGCCCCGTCACTCTGAGAACAACCCT
TCACCAAGAAGTCTTCACCTTCTCTCGTCCCAACTACGATGGTCCCCCGG
GAAAAAAGGTTCCCGTGAACAAAGTGACTCACCCGGATCTAAATCCCGAA
CATCTAGGTTCATGGCCCTTTTACCGGCCAGAACCGTCGCGAGTGTTCGC
TATGCTCCCGCACCTCCGTCCTAGCGTCTGCTACGTTTTCGGAGGGAAAT
CGGATATGTGCTTGCCTGATATGATGGCGGATAAGATGGCTGCTACAGGA
ACGGGGCTGGGAGGTAGTGGTGGGGCCCCTGCTGGTCGGGTGCGCGATGT
TTATCTTGCCGAATATGGCCACCTGCTTGCTCAGGAGGCTCCCAAAGAGT
GTGCTGAGGCAGCGGGTAAATGGCTCGGTGCTGAATTAGAGCGATGGAGA
ACTGAGGAGCGAGAGTTCCAGGAACAGTGGAGTCGGAAGTCAAAGGTCGA
GAAAGTCACAATTGATTCTCGGTGGAAGGACCATGTTCCGCGTCCAGAGC
GGCCGAAGAAGCCTGCTCAGTCGAAGCTGTGAATGTCGCTGTCTTCACAA
TCCTCTGGCCCTTTTCGGGTCGTTGAGCATATCGTCGAATGCCAACATAT
CAGGGAGTATCCCGCGGCGACGGCAAATGGCCAAGAAGATGTATTGAATT
TGGTGGTAAAACAATATATCCCACTCGATAATCCCAACCCACAGCCAGGG
GATGTAACGATTCTTGCTGCGCATGCGAATGGGTTTCCTAAGGAGCTTTA
CGAACCTCTATGGGAGGAACTGTACGCTCGATCAAAAGCCAATGGCTTCC
GAATCAGAAGTATATGGATGGCGGATGTCGCGCACCAGGGCGAGAGCAGC
GTTGTAAATGAGGATCTCCTGGGCAACGACCCCAGCTGGTTCGACCACCC
CAGAGACCTCCTTCACCTTATCAACGTCAAGCGCAAAGAGATGCCTCGCC
CCATCGTCGGGATAGGCCACAGTATGGGCGGTGCACATCTCGCCCAGCTA
TGCCTAATGCACCCACGTCTCATCCACAGCTTAGTCCTTCTGGATCCCGT
AATACAGCGTGAATCCACCCAGCTCGACGGGCTCGAAATGGCCATGCGAC
ATAGACAACGGATCGCCAAAACAACCCAATTATCCACCTACCGACGGGAC
ACATGGCCATCCCGTAAAACCGCTGCGGAGGCCTTCAAGAAAAACCCGTT
CTACCTAGCCTGGGATTCCCGCGTCCTCGACCGCTGGATCGAGCACGGTC
TCCGCGAGCTCCCCACGGCCATTCACCCTCTGGACGAATCCCAGCAAAAG
GAGGGAAGCAACGACCGCCCCGTCACTCTGAGAACAACCCTTCACCAAGA
AGTCTTCACCTTCTCTCGTCCCAACTACGATGGTCCCCCGGGAAAAAAGG
TTCCCGTGAACAAAGTGACTCACCCGGATCTAAATCCCGAACATCTAGGT
TCATGGCCCTTTTACCGGCCAGAACCGTCGCGAGTGTTCGCTATGCTCCC
GCACCTCCGTCCTAGCGTCTGCTACGTTTTCGGAGGGAAATCGGATATGT
GCTTGCCTGATATGATGGCGGATAAGATGGCTGCTACAGGAACGGGGCTG
GGAGGTAGTGGTGGGGCCCCTGCTGGTCGGGTGCGCGATGTTTATCTTGC
CGAATATGGCCACCTGCTTGCTCAGGAGGCTCCCAAAGAGTGTGCTGAGG
CAGCGGGTAAATGGCTCGGTGCTGAATTAGAGCGATGGAGAACTGAGGAG
CGAGAGTTCCAGGAACAGTGGAGTCGGAAGTCAAAGGTCGAGAAAGTCAC
AATTGATTCTCGGTGGAAGGACCATGTTCCGCGTCCAGAGCGGCCGAAGA
AGCCTGCTCAGTCGAAGCTGTGAATGTCGCTGTCTTCACAATCCTCTGGC
CCTTTTCGGGTCGTTGAGCATATCGTCGAATGCCAACATATCAGGGAGTA
TCCCGCGGCGACGGCAAATGGCCAAGAAGATGTATTGAATTTGGTGGTAA
AACAATATATCCCACTCGATAATCCCAACCCACAGCCAGGGGATGTAACG
ATTCTTGCTGCGCATGCGAATGGGTTTCCTAAGGAGCTTTACGAACCTCT
ATGGGAGGAACTGTACGCTCGATCAAAAGCCAATGGCTTCCGAATCAGAA
GTATATGGATGGCGGATGTCGCGCACCAGGGCGAGAGCAGCGTTGTAAAT
GAGGATCTCCTGGGCAACGACCCCAGCTGGTTCGACCACCCCAGAGACCT
CCTTCACCTTATCAACGTCAAGCGCAAAGAGATGCCTCGCCCCATCGTCG
GGATAGGCCACAGTATGGGCGGTGCACATCTCGCCCAGCTATGCCTAATG
CACCCACGTCTCATCCACAGCTTAGTCCTTCTGGATCCCGTAATACAGCG
TGAATCCACCCAGCTCGACGGGCTCGAAATGGCCATGCGACATAGACAAC
GGATCGCCAAAACAACCCAATTATCCACCTACCGACGGGACACATGGCCA
TCCCGTAAAACCGCTGCGGAGGCCTTCAAGAAAAACCCGTTCTACCTAGC
CTGGGATTCCCGCGTCCTCGACCGCTGGATCGAGCACGGTCTCCGCGAGC
TCCCCACGGCCATTCACCCTCTGGACGAATCCCAGCAAAAGGAGGGAAGC
AACGACCGCCCCGTCACTCTGAGAACAACCCTTCACCAAGAAGTCTTCAC
CTTCTCTCGTCCCAACTACGATGGTCCCCCGGGAAAAAAGGTTCCCGTGA
ACAAAGTGACTCACCCGGATCTAAATCCCGAACATCTAGGTTCATGGCCC
TTTTACCGGCCAGAACCGTCGCGAGTGTTCGCTATGCTCCCGCACCTCCG
TCCTAGCGTCTGCTACGTTTTCGGAGGGAAATCGGATATGTGCTTGCCTG
ATATGATGGCGGATAAGATGGCTGCTACAGGAACGGGGCTGGGAGGTAGT
GGTGGGGCCCCTGCTGGTCGGGTGCGCGATGTTTATCTTGCCGAATATGG
CCACCTGCTTGCTCAGGAGGCTCCCAAAGAGTGTGCTGAGGCAGCGGGTA
AATGGCTCGGTGCTGAATTAGAGCGATGGAGAACTGAGGAGCGAGAGTTC
CAGGAACAGTGGAGTCGGAAGTCAAAGGTCGAGAAAGTCACAATTGATTC
TCGGTGGAAGGACCATGTTCCGCGTCCAGAGCGGCCGAAGAAGCCTGCTC
AGTCGAAGCTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0209971 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12146 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1788206..1789810 + |
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