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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1808995..1809712- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000618-T1 ID=CBS51388_000618-T1|Name=CBS51388_000618-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=718bp|location=Sequence derived from alignment at An01:1808995..1809712- (Aspergillus niger CBS 513.88)
ATGCGTTTTCTCCAGATCTTGGCTTCCTCTCTTGCTGTCGGCCTCGCGGC
CGCGGCGACTCCCTCCTCCTTTACTCCGTCCGTCGATGCGGATGTTGGCG
TGGTTTTCACCAAAGATGGGAGCCATCTAACTCTCACTTCGGGGGCCTTA
ATCAACCAGAACTGTAAGAAAAATTGCTTCTGACACACATGAAACCTTTG
CATTCCGTGCTCACAACGCTTCCACAGGGACCATCAACATTCCCACCTTG
TACCTGGAGGACACCTCCTCCACTGATGACGAGTACGTCATCATCATGAT
CGACCCAACCATCAATGAGGATGGTGTCTCAACAGCCGCCCTACACTGGT
ACCAGCCCTACTTAGCCTACTCGTCTGGTGTCTTGGAAATCAGCAACAAG
AGCGCCCCAAACGCGGAGTATGTCTACCCGACACCGCTGGAAGGACCTGC
CCACGATTACATCCTGCTGCTGTACAGCCAGCCAGAAGACTACTCCCTGC
CCGACTGCCTCGAGAGCTTGCTGCCTGCAACAGATGCGGCCCGTCTTGGG
TTCAACATTGATGAGTTCGAGGAAGTAACAGGCTTGGGTACTCCCGTGGC
GGCGAATTGGTTTCAAGTCGTGAACCCAACCCCTGCAACTACCACCTATG
CTATCACGTCTACTCTCGTTTCCACATATGCGTGTGAGGCCACCGCCACG
GCTACTTCTAGCTCATGA back to topCoding sequence (CDS) from alignment at An01:1808995..1809712- >CBS51388_000618-T1 ID=CBS51388_000618-T1|Name=CBS51388_000618-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1308bp|location=Sequence derived from alignment at An01:1808995..1809712- (Aspergillus niger CBS 513.88)
GGACCATCAACATTCCCACCTTGTACCTGGAGGACACCTCCTCCACTGAT
GACGAGTACGTCATCATCATGATCGACCCAACCATCAATGAGGATGGTGT
CTCAACAGCCGCCCTACACTGGTACCAGCCCTACTTAGCCTACTCGTCTG
GTGTCTTGGAAATCAGCAACAAGAGCGCCCCAAACGCGGAGTATGTCTAC
CCGACACCGCTGGAAGGACCTGCCCACGATTACATCCTGCTGCTGTACAG
CCAGCCAGAAGACTACTCCCTGCCCGACTGCCTCGAGAGCTTGCTGCCTG
CAACAGATGCGGCCCGTCTTGGGTTCAACATTGATGAGTTCGAGGAAGTA
ACAGGCTTGGGTACTCCCGTGGCGGCGAATTGGTTTCAAGTCGTGAACCC
AACCCCTGCAACTACCACCTATGCTATCACGTCTACTCTCGTTTCCACAT
ATGCGTGTGAGGCCACCGCCACGGCTACTTCTAGCTCATGAATGCGTTTT
CTCCAGATCTTGGCTTCCTCTCTTGCTGTCGGCCTCGCGGCCGCGGCGAC
TCCCTCCTCCTTTACTCCGTCCGTCGATGCGGATGTTGGCGTGGTTTTCA
CCAAAGATGGGAGCCATCTAACTCTCACTTCGGGGGCCTTAATCAACCAG
AACTGGACCATCAACATTCCCACCTTGTACCTGGAGGACACCTCCTCCAC
TGATGACGAGTACGTCATCATCATGATCGACCCAACCATCAATGAGGATG
GTGTCTCAACAGCCGCCCTACACTGGTACCAGCCCTACTTAGCCTACTCG
TCTGGTGTCTTGGAAATCAGCAACAAGAGCGCCCCAAACGCGGAGTATGT
CTACCCGACACCGCTGGAAGGACCTGCCCACGATTACATCCTGCTGCTGT
ACAGCCAGCCAGAAGACTACTCCCTGCCCGACTGCCTCGAGAGCTTGCTG
CCTGCAACAGATGCGGCCCGTCTTGGGTTCAACATTGATGAGTTCGAGGA
AGTAACAGGCTTGGGTACTCCCGTGGCGGCGAATTGGTTTCAAGTCGTGA
ACCCAACCCCTGCAACTACCACCTATGCTATCACGTCTACTCTCGTTTCC
ACATATGCGTGTGAGGCCACCGCCACGGCTACTTCTAGCTCATGAATGCG
TTTTCTCCAGATCTTGGCTTCCTCTCTTGCTGTCGGCCTCGCGGCCGCGG
CGACTCCCTCCTCCTTTACTCCGTCCGTCGATGCGGATGTTGGCGTGGTT
TTCACCAAAGATGGGAGCCATCTAACTCTCACTTCGGGGGCCTTAATCAA
CCAGAACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| DBxref | InterPro:IPR035810 |
| DBxref | InterPro:IPR036610 |
| DBxref | InterPro:IPR008914 |
| DBxref | PFAM:PF01161 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1808995..1809712 - |
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