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CBS51388_000673-T1, CBS51388_000673-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000673-T1
Unique NameCBS51388_000673-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:1975898..1976757-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000673-T1 ID=CBS51388_000673-T1|Name=CBS51388_000673-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=860bp|location=Sequence derived from alignment at An01:1975898..1976757- (Aspergillus niger CBS 513.88)
ATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTC
TGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCT
ACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGGGTAAGCACTGTTGCA
CCTCCAGGACGATCATGAGTAATCGCTAATCGATCACTATTTATTTCTGC
ATTAGACTTCCATTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGC
GTGCAGAAGGAGATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCC
TACGCCCAAGTATCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCG
ACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGC
GGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGAC
CCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTACTTCGAAATTAGCA
ACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATG
GGTTTCTACGATACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGA
GGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACA
CCTATGCTGTCCTTGTGCGGAGACACGGAATGTAAGTTTCATTTTTTTAA
CCCTTAACTTTCGAGTGACGGCGGGCTCATGTGTGTGTATAGTTATGTGT
GGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTAC
CTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAA
AGAAACGTAG
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Coding sequence (CDS) from alignment at An01:1975898..1976757-

>CBS51388_000673-T1 ID=CBS51388_000673-T1|Name=CBS51388_000673-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2187bp|location=Sequence derived from alignment at An01:1975898..1976757- (Aspergillus niger CBS 513.88)
TTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTGCGAGAGTC
TAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTGGCCTTCCG
TGGGTGAAAGAAACGTAGACTTCCATTCGTCGCGATAATCATATATTCAT
TGCTCCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAACATCTTTG
TCTTGGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCAAATATATT
CGCAAGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTGTTCCTTGC
CGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTCTCAGTGGG
CGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGAACGCCTAC
TTCGAAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGTGGAAAGGG
CAAGGGCATGATGGGTTTCTACGATACTCTTCGTATCCCGATTATTGATA
ACACCGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGGCGATGGAG
GAGTACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGAATATGGCC
CAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCGTCTGACCC
CGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTTCTACAATT
GGGGCTGGGTCACCGGTACTGGTGGCGGGTTATGTGTGGGGAGACGACGT
CGTCAAAGCCAAGACTCAGTGCGAGAGTCTAGACTACCTGTTCCAGCTTG
CTGTTGAGATGCACAAGCTTGGCCTTCCGTGGGTGAAAGAAACGTAGACT
TCCATTCGTCGCGATAATCATATATTCATTGCTCCTTCTGGCGTGCAGAA
GGAGATGATGAAATCCGACAACATCTTTGTCTTGGAATTCCCTACGCCCA
AGTATCCTCCGTCCGATCGCAAATATATTCGCAAGCCGCTCGACCTGAAG
CCCTCGGCATGCACGCCACTGTTCCTTGCCGCTTTTGAGCGCGGGGCTGG
CTGCTGCATCCACACTCATTCTCAGTGGGCGGTCCTGGTGACCCTCCTGG
TTGAGCGCGAGAAGGGCCCGAACGCCTACTTCGAAATTAGCAACATTGAA
CAGATTAAGGGTATTCCCCGTGGAAAGGGCAAGGGCATGATGGGTTTCTA
CGATACTCTTCGTATCCCGATTATTGATAACACCGCGTTTGAGGAAGATC
TCACGGGAAGCTTGGAGAAGGCGATGGAGGAGTACCCTGACACCTATGCT
GTCCTTGTGCGGAGACACGGAATATGGCCCAGGAAATCCAAAAAGAGAAC
AATGACCATTTGGTCCAGTCGTCTGACCCCGAGCATCCCGCCAACTTGAT
CCCTGATCTCTGTCGCCGGTTCTACAATTGGGGCTGGGTCACCGGTACTG
GTGGCGGGTTATGTGTGGGGAGACGACGTCGTCAAAGCCAAGACTCAGTG
CGAGAGTCTAGACTACCTGTTCCAGCTTGCTGTTGAGATGCACAAGCTTG
GCCTTCCGTGGGTGAAAGAAACGTAGACTTCCATTCGTCGCGATAATCAT
ATATTCATTGCTCCTTCTGGCGTGCAGAAGGAGATGATGAAATCCGACAA
CATCTTTGTCTTGGAATTCCCTACGCCCAAGTATCCTCCGTCCGATCGCA
AATATATTCGCAAGCCGCTCGACCTGAAGCCCTCGGCATGCACGCCACTG
TTCCTTGCCGCTTTTGAGCGCGGGGCTGGCTGCTGCATCCACACTCATTC
TCAGTGGGCGGTCCTGGTGACCCTCCTGGTTGAGCGCGAGAAGGGCCCGA
ACGCCTACTTCGAAATTAGCAACATTGAACAGATTAAGGGTATTCCCCGT
GGAAAGGGCAAGGGCATGATGGGTTTCTACGATACTCTTCGTATCCCGAT
TATTGATAACACCGCGTTTGAGGAAGATCTCACGGGAAGCTTGGAGAAGG
CGATGGAGGAGTACCCTGACACCTATGCTGTCCTTGTGCGGAGACACGGA
ATATGGCCCAGGAAATCCAAAAAGAGAACAATGACCATTTGGTCCAGTCG
TCTGACCCCGAGCATCCCGCCAACTTGATCCCTGATCTCTGTCGCCGGTT
CTACAATTGGGGCTGGGTCACCGGTACTGGTGGCGGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0019509L-methionine salvage from methylthioadenosine
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MDE1CBS51388_000673Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000673-T1CBS51388_000673-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000673-T1.cdsCBS51388_000673-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000673-T1.exon3CBS51388_000673-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000673-T1.exon2CBS51388_000673-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000673-T1.exon1CBS51388_000673-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR027514
DBxrefInterPro:IPR017714
DBxrefInterPro:IPR036409
DBxrefInterPro:IPR001303
DBxrefPFAM:PF00596
ProductMethylthioribulose-1-phosphate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:1975898..1976757 -
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