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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1984772..1986358+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000677-T1 ID=CBS51388_000677-T1|Name=CBS51388_000677-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1587bp|location=Sequence derived from alignment at An01:1984772..1986358+ (Aspergillus niger CBS 513.88)
ATGTCTTTCAATAGGAAGTATGCTGGTCTTCCCGACCTGGTACGTTACAT
CTACCATACCTCCCTCCTGCCCCATCTCAATCAACCGACTACTAACATCG
TTTGTTTGGGCCAGGATCTCGCTCCGGATATCTACGAGACCCCCGATCTG
ACCGACGAAGCATCTACCGTTCCGGTTAGCTACCCCGCCTCACGCCTGCG
TCTGCCTTTTCCAATGCTTCTAGCTGCTCATCCTTGACACTACACTCTAT
AGACTACAACTATCCGCACCGCATCCAACGTAGACGATGACGCCGGCTCC
AACTCCGACATCGACCGGCAGGGGATCAATGCAGACGAGGCACGCGCCCA
CTTCTTAGGAGCCACGGTCGACGCGCGCGATGTCAACTTCTCCGACAGTA
TCGCGATGAAGCGGAAGGCATACAAGAACAAGAACCGTCGCCGGCGCAGA
AATGAGAACGGTTCAGAAGAGCCCGAAGACATCAGCGACAGCGAAGAGGA
AAGCCTAGAGAGGAAGCTCGCCCGCCTTCGCAGGGAAGTGGAGGAACTGA
AAGACGAGATGGCCGCTCGACAGACCGAAACCGAACCGGAAGCCGCAGAA
GGGAAGGAGCCCACGGACGACGGCGTCCTCGAATTGAGCCGCGCCCTGGA
CAACCTCTATACCTCCCGCAGCGACAACACGGGGCCACACTCCGCAGCTG
CAATCCTAGCACAAAAGATTGCAACCAAATCCACATCCGAAACCGCTGCA
CTCAGCACCCAGAACGCAGGCGCCACACAACAACCCGAACCCACAGCTCC
GTCATCCTCGGGTGTCCTTGCCCACGCCGCAGCATTCGACGGCCGCCTCG
CCCTCATCGAAGCCGCCATGGGCATCTCCAGCTCCTCCAACCCCTTCGTC
AGCGACGGCATCTCCGAACCTGCCCTCCAGCCCGTCCTCCCAGCCGTCGA
CCACCTCACATCCCGCCTCACCACCCTCATGAACATCCTTGTCGGCCCGA
ACCCCGTCTCCGCCGTGCCAACAATGGGCTCCGCACCCCCCTCCACAACA
GTCACCACCCCGCATCTCGAGACCCTCTCCACTCGAGTCCGCAAACTCAC
CGCAGACACAGAAGCCCTGGCGTCCGCGCGGAAACGTGCCGTGGACGCCG
CCAAGGCAGCTCAGAACGCGCGCATCGCATCCGCCGCTATCGAGCCCTCA
GACATGTCCGTCTCGTCGTCCTCCGCTACGGAAGTCGACCCGGCTGCTAC
CCAGCGCGATGAGCAAGCTACCAAGATCCAGGCCCTCTACGCTACTCTCC
CCACCATTCAGTCCCTCCATCCCATCCTTCCCAGCGTGCTGGAGCGGCTT
CGCTCCCTTCGCGCTATCCATGCGGGTGCTGCACAGGCTTCGGAGTCACT
TGATACGCTGGAGAAGAGACAGGCGGATATGGCAAGGGAGATTGAGCAGT
GGCGCGAGGGTCTGCAGGTAGTCGAGGAGAAGATGAGCCAGGGCGAAGCA
GCGATGAAGAGTAATATCGAGCTTGTCGAACCTTGGGTTCGGGATCTGCA
GGCGCGGCTGGGTCGGTTGGAGGGGCAGGGCGCATGA back to topCoding sequence (CDS) from alignment at An01:1984772..1986358+ >CBS51388_000677-T1 ID=CBS51388_000677-T1|Name=CBS51388_000677-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4302bp|location=Sequence derived from alignment at An01:1984772..1986358+ (Aspergillus niger CBS 513.88)
ATGTCTTTCAATAGGAAGTATGCTGGTCTTCCCGACCTGGATCTCGCTCC
GGATATCTACGAGACCCCCGATCTGACCGACGAAGCATCTACCGTTCCGA
CTACAACTATCCGCACCGCATCCAACGTAGACGATGACGCCGGCTCCAAC
TCCGACATCGACCGGCAGGGGATCAATGCAGACGAGGCACGCGCCCACTT
CTTAGGAGCCACGGTCGACGCGCGCGATGTCAACTTCTCCGACAGTATCG
CGATGAAGCGGAAGGCATACAAGAACAAGAACCGTCGCCGGCGCAGAAAT
GAGAACGGTTCAGAAGAGCCCGAAGACATCAGCGACAGCGAAGAGGAAAG
CCTAGAGAGGAAGCTCGCCCGCCTTCGCAGGGAAGTGGAGGAACTGAAAG
ACGAGATGGCCGCTCGACAGACCGAAACCGAACCGGAAGCCGCAGAAGGG
AAGGAGCCCACGGACGACGGCGTCCTCGAATTGAGCCGCGCCCTGGACAA
CCTCTATACCTCCCGCAGCGACAACACGGGGCCACACTCCGCAGCTGCAA
TCCTAGCACAAAAGATTGCAACCAAATCCACATCCGAAACCGCTGCACTC
AGCACCCAGAACGCAGGCGCCACACAACAACCCGAACCCACAGCTCCGTC
ATCCTCGGGTGTCCTTGCCCACGCCGCAGCATTCGACGGCCGCCTCGCCC
TCATCGAAGCCGCCATGGGCATCTCCAGCTCCTCCAACCCCTTCGTCAGC
GACGGCATCTCCGAACCTGCCCTCCAGCCCGTCCTCCCAGCCGTCGACCA
CCTCACATCCCGCCTCACCACCCTCATGAACATCCTTGTCGGCCCGAACC
CCGTCTCCGCCGTGCCAACAATGGGCTCCGCACCCCCCTCCACAACAGTC
ACCACCCCGCATCTCGAGACCCTCTCCACTCGAGTCCGCAAACTCACCGC
AGACACAGAAGCCCTGGCGTCCGCGCGGAAACGTGCCGTGGACGCCGCCA
AGGCAGCTCAGAACGCGCGCATCGCATCCGCCGCTATCGAGCCCTCAGAC
ATGTCCGTCTCGTCGTCCTCCGCTACGGAAGTCGACCCGGCTGCTACCCA
GCGCGATGAGCAAGCTACCAAGATCCAGGCCCTCTACGCTACTCTCCCCA
CCATTCAGTCCCTCCATCCCATCCTTCCCAGCGTGCTGGAGCGGCTTCGC
TCCCTTCGCGCTATCCATGCGGGTGCTGCACAGGCTTCGGAGTCACTTGA
TACGCTGGAGAAGAGACAGGCGGATATGGCAAGGGAGATTGAGCAGTGGC
GCGAGGGTCTGCAGGTAGTCGAGGAGAAGATGAGCCAGGGCGAAGCAGCG
ATGAAGAGTAATATCGAGCTTGTCGAACCTTGGGTTCGGGATCTGCAGGC
GCGGCTGGGTCGGTTGGAGGGGCAGGGCGCATGAATGTCTTTCAATAGGA
AGTATGCTGGTCTTCCCGACCTGGATCTCGCTCCGGATATCTACGAGACC
CCCGATCTGACCGACGAAGCATCTACCGTTCCGACTACAACTATCCGCAC
CGCATCCAACGTAGACGATGACGCCGGCTCCAACTCCGACATCGACCGGC
AGGGGATCAATGCAGACGAGGCACGCGCCCACTTCTTAGGAGCCACGGTC
GACGCGCGCGATGTCAACTTCTCCGACAGTATCGCGATGAAGCGGAAGGC
ATACAAGAACAAGAACCGTCGCCGGCGCAGAAATGAGAACGGTTCAGAAG
AGCCCGAAGACATCAGCGACAGCGAAGAGGAAAGCCTAGAGAGGAAGCTC
GCCCGCCTTCGCAGGGAAGTGGAGGAACTGAAAGACGAGATGGCCGCTCG
ACAGACCGAAACCGAACCGGAAGCCGCAGAAGGGAAGGAGCCCACGGACG
ACGGCGTCCTCGAATTGAGCCGCGCCCTGGACAACCTCTATACCTCCCGC
AGCGACAACACGGGGCCACACTCCGCAGCTGCAATCCTAGCACAAAAGAT
TGCAACCAAATCCACATCCGAAACCGCTGCACTCAGCACCCAGAACGCAG
GCGCCACACAACAACCCGAACCCACAGCTCCGTCATCCTCGGGTGTCCTT
GCCCACGCCGCAGCATTCGACGGCCGCCTCGCCCTCATCGAAGCCGCCAT
GGGCATCTCCAGCTCCTCCAACCCCTTCGTCAGCGACGGCATCTCCGAAC
CTGCCCTCCAGCCCGTCCTCCCAGCCGTCGACCACCTCACATCCCGCCTC
ACCACCCTCATGAACATCCTTGTCGGCCCGAACCCCGTCTCCGCCGTGCC
AACAATGGGCTCCGCACCCCCCTCCACAACAGTCACCACCCCGCATCTCG
AGACCCTCTCCACTCGAGTCCGCAAACTCACCGCAGACACAGAAGCCCTG
GCGTCCGCGCGGAAACGTGCCGTGGACGCCGCCAAGGCAGCTCAGAACGC
GCGCATCGCATCCGCCGCTATCGAGCCCTCAGACATGTCCGTCTCGTCGT
CCTCCGCTACGGAAGTCGACCCGGCTGCTACCCAGCGCGATGAGCAAGCT
ACCAAGATCCAGGCCCTCTACGCTACTCTCCCCACCATTCAGTCCCTCCA
TCCCATCCTTCCCAGCGTGCTGGAGCGGCTTCGCTCCCTTCGCGCTATCC
ATGCGGGTGCTGCACAGGCTTCGGAGTCACTTGATACGCTGGAGAAGAGA
CAGGCGGATATGGCAAGGGAGATTGAGCAGTGGCGCGAGGGTCTGCAGGT
AGTCGAGGAGAAGATGAGCCAGGGCGAAGCAGCGATGAAGAGTAATATCG
AGCTTGTCGAACCTTGGGTTCGGGATCTGCAGGCGCGGCTGGGTCGGTTG
GAGGGGCAGGGCGCATGAATGTCTTTCAATAGGAAGTATGCTGGTCTTCC
CGACCTGGATCTCGCTCCGGATATCTACGAGACCCCCGATCTGACCGACG
AAGCATCTACCGTTCCGACTACAACTATCCGCACCGCATCCAACGTAGAC
GATGACGCCGGCTCCAACTCCGACATCGACCGGCAGGGGATCAATGCAGA
CGAGGCACGCGCCCACTTCTTAGGAGCCACGGTCGACGCGCGCGATGTCA
ACTTCTCCGACAGTATCGCGATGAAGCGGAAGGCATACAAGAACAAGAAC
CGTCGCCGGCGCAGAAATGAGAACGGTTCAGAAGAGCCCGAAGACATCAG
CGACAGCGAAGAGGAAAGCCTAGAGAGGAAGCTCGCCCGCCTTCGCAGGG
AAGTGGAGGAACTGAAAGACGAGATGGCCGCTCGACAGACCGAAACCGAA
CCGGAAGCCGCAGAAGGGAAGGAGCCCACGGACGACGGCGTCCTCGAATT
GAGCCGCGCCCTGGACAACCTCTATACCTCCCGCAGCGACAACACGGGGC
CACACTCCGCAGCTGCAATCCTAGCACAAAAGATTGCAACCAAATCCACA
TCCGAAACCGCTGCACTCAGCACCCAGAACGCAGGCGCCACACAACAACC
CGAACCCACAGCTCCGTCATCCTCGGGTGTCCTTGCCCACGCCGCAGCAT
TCGACGGCCGCCTCGCCCTCATCGAAGCCGCCATGGGCATCTCCAGCTCC
TCCAACCCCTTCGTCAGCGACGGCATCTCCGAACCTGCCCTCCAGCCCGT
CCTCCCAGCCGTCGACCACCTCACATCCCGCCTCACCACCCTCATGAACA
TCCTTGTCGGCCCGAACCCCGTCTCCGCCGTGCCAACAATGGGCTCCGCA
CCCCCCTCCACAACAGTCACCACCCCGCATCTCGAGACCCTCTCCACTCG
AGTCCGCAAACTCACCGCAGACACAGAAGCCCTGGCGTCCGCGCGGAAAC
GTGCCGTGGACGCCGCCAAGGCAGCTCAGAACGCGCGCATCGCATCCGCC
GCTATCGAGCCCTCAGACATGTCCGTCTCGTCGTCCTCCGCTACGGAAGT
CGACCCGGCTGCTACCCAGCGCGATGAGCAAGCTACCAAGATCCAGGCCC
TCTACGCTACTCTCCCCACCATTCAGTCCCTCCATCCCATCCTTCCCAGC
GTGCTGGAGCGGCTTCGCTCCCTTCGCGCTATCCATGCGGGTGCTGCACA
GGCTTCGGAGTCACTTGATACGCTGGAGAAGAGACAGGCGGATATGGCAA
GGGAGATTGAGCAGTGGCGCGAGGGTCTGCAGGTAGTCGAGGAGAAGATG
AGCCAGGGCGAAGCAGCGATGAAGAGTAATATCGAGCTTGTCGAACCTTG
GGTTCGGGATCTGCAGGCGCGGCTGGGTCGGTTGGAGGGGCAGGGCGCAT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005869 | dynactin complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007017 | microtubule-based process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR028133 |
| DBxref | PFAM:PF04912 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1984772..1986358 + |
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