You are here

Home

CBS51388_000708-T1, CBS51388_000708-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000708-T1
Unique NameCBS51388_000708-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2081473..2083308+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000708-T1 ID=CBS51388_000708-T1|Name=CBS51388_000708-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1836bp|location=Sequence derived from alignment at An01:2081473..2083308+ (Aspergillus niger CBS 513.88)
ATGGCGCGGTCATACTTGGGCCTCACAGGAGGCAAGCTGCAAATCGCTAT
CAGTGTCATCGCTGGTATGGATTTCTTGCTGTTCGGTTACGATCAAGGTG
TCACTGGTGGTCTGTTGACCCTCCAATCGTTCATCAAATACTTTCCAACT
ATCGCAACCAACGGTGAATACTATGAGAGCTTGACTAAAGCGCAACAAAG
TACCCAGTCGACTCGCCAAGGTAAGTGCACCATTTTGTGCTATGCTCTAA
TCATTGATTCAGCCCGCGGACTGATCTTTGTTTTTGTCAAGGTGTCGTTG
TCGCTGCGTACAACTTGGGCTGCTTTGCTGGATCGATTCCCACAATTTGG
ATTGGCAACATGCTCGGTCGGCGCAAAACTATCTTCGTTGGTTCGTTTAT
TATGTGCATCGGAGCTTTGCTGCAATGCACTTCCTACCAACTCGGGCAAT
TCATTGTTGGACGCTTGGTTACTGGTTTCGGTAGGTGCAACGACGCCTTA
TGTCCAACTTGTGAGTTATGCAACTTATGCAATACTAATCATATACTTTG
TCGGTAGGAAACGGCATGAACACCTCTACCGTGCCCACCTGGCAGTCAGA
GTGCTGTAAATCCAACCATCGTGGAATGCTAGTCATGATTGAAGGTGCCA
TGATTACTTGCGGTATCACCATCAGTTACTGGATTGATTTCGGTCTGCTA
TTCGCCGATCCAAATGAGGTGGCTTGGCGATTCCCGCTGGCCTTCCAGAT
TTTCTTCGCCCTCATTATCCTGGTTTTCGTTTTGCCTCTTCCCGAGTCGC
CCCGTTGGCTAATCCTCAAGGGCCGCGAGGACGAAGCAAGGACTGTCCTG
CGGTCCCTCTTGGGCGACGCTGACGAGACCTTCATTGAGACGGAATTTAC
GGCCATCAAGGCTACAGTCTTGGAAATGGCCAAGGGTTCGTTCCGTGACA
TGTTCACCATGACCGAGGACCGCCACTTCCACCGCGTGGTCTTAGCCTAC
GTCAATCAAATGTTCCAACAGATTTCGGGTATCAACCTGATTACATACTA
CATCCCCGTTGTGCTGGAGAACCAGCTGGGTATGACCCTCGAAAACTCCC
GCTTGATATCAGCTTGCAACGGGACGGAATACTTCCTCGCTTCATGGATT
GCCGTGTTCACCATTGAGCACTTTGGTCGTCGGACACTGATGCTTTTTGG
CGCCGCGGGAATGTCAATATCGATGGTCATCCTTGCCGTCACCGCCAGCA
TCGGTAGTAACGGAGCCAATATCGCCTGTATCGTCTTCCTGTTCGTTTTC
AATACATTCTTCGCCATTGGCTGGCTGGGTATGACCTGGCTGTATCCGGC
TGAAGTGGTGCCGCTACGGATTCGTGCTCCGGCTAACGCGCTGGCAACGT
CATCGAACTGGATCTTCAACTTCCTGGTGGTCATGATCACGCCGGTGGCT
TTTGACAACATTGGGTACCAGACCTACATCATCTTTGCGGTCATGTAAGT
TCCTCATCCCCTCGTTCACTCTCCATTTTCTGGCATCCTCAGTTCTAAAC
TTTGAACAGCAACGCCTTTATCTTCCCCGTAGTGCTCTTCTTCTATCCAG
AGACGGCCCGCCGATCCCTGGAGGAAATGGATCGTATTTTCCGCAAAACG
ACCAGTGTCTTCAACGTTGTCAAGGTTGCTAACGAGGAACCTCACATGTA
CGGCAAGCATGGTGAGCTTCTGCGTACGCTCGATGACGTGGAAGACGATG
CAGTCCGTCGCGCCAGTGTGCTGAGCCACCGGGCAAAGGACATGGAGAAG
GACAGTGACGAGAACACCAACAGCGTGAAGGCATAA
back to top

Coding sequence (CDS) from alignment at An01:2081473..2083308+

>CBS51388_000708-T1 ID=CBS51388_000708-T1|Name=CBS51388_000708-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6492bp|location=Sequence derived from alignment at An01:2081473..2083308+ (Aspergillus niger CBS 513.88)
ATGGCGCGGTCATACTTGGGCCTCACAGGAGGCAAGCTGCAAATCGCTAT
CAGTGTCATCGCTGGTATGGATTTCTTGCTGTTCGGTTACGATCAAGGTG
TCACTGGTGGTCTGTTGACCCTCCAATCGTTCATCAAATACTTTCCAACT
ATCGCAACCAACGGTGAATACTATGAGAGCTTGACTAAAGCGCAACAAAG
TACCCAGTCGACTCGCCAAGGTGTCGTTGTCGCTGCGTACAACTTGGGCT
GCTTTGCTGGATCGATTCCCACAATTTGGATTGGCAACATGCTCGGTCGG
CGCAAAACTATCTTCGTTGGTTCGTTTATTATGTGCATCGGAGCTTTGCT
GCAATGCACTTCCTACCAACTCGGGCAATTCATTGTTGGACGCTTGGTTA
CTGGTTTCGGAAACGGCATGAACACCTCTACCGTGCCCACCTGGCAGTCA
GAGTGCTGTAAATCCAACCATCGTGGAATGCTAGTCATGATTGAAGGTGC
CATGATTACTTGCGGTATCACCATCAGTTACTGGATTGATTTCGGTCTGC
TATTCGCCGATCCAAATGAGGTGGCTTGGCGATTCCCGCTGGCCTTCCAG
ATTTTCTTCGCCCTCATTATCCTGGTTTTCGTTTTGCCTCTTCCCGAGTC
GCCCCGTTGGCTAATCCTCAAGGGCCGCGAGGACGAAGCAAGGACTGTCC
TGCGGTCCCTCTTGGGCGACGCTGACGAGACCTTCATTGAGACGGAATTT
ACGGCCATCAAGGCTACAGTCTTGGAAATGGCCAAGGGTTCGTTCCGTGA
CATGTTCACCATGACCGAGGACCGCCACTTCCACCGCGTGGTCTTAGCCT
ACGTCAATCAAATGTTCCAACAGATTTCGGGTATCAACCTGATTACATAC
TACATCCCCGTTGTGCTGGAGAACCAGCTGGGTATGACCCTCGAAAACTC
CCGCTTGATATCAGCTTGCAACGGGACGGAATACTTCCTCGCTTCATGGA
TTGCCGTGTTCACCATTGAGCACTTTGGTCGTCGGACACTGATGCTTTTT
GGCGCCGCGGGAATGTCAATATCGATGGTCATCCTTGCCGTCACCGCCAG
CATCGGTAGTAACGGAGCCAATATCGCCTGTATCGTCTTCCTGTTCGTTT
TCAATACATTCTTCGCCATTGGCTGGCTGGGTATGACCTGGCTGTATCCG
GCTGAAGTGGTGCCGCTACGGATTCGTGCTCCGGCTAACGCGCTGGCAAC
GTCATCGAACTGGATCTTCAACTTCCTGGTGGTCATGATCACGCCGGTGG
CTTTTGACAACATTGGGTACCAGACCTACATCATCTTTGCGGTCATCAAC
GCCTTTATCTTCCCCGTAGTGCTCTTCTTCTATCCAGAGACGGCCCGCCG
ATCCCTGGAGGAAATGGATCGTATTTTCCGCAAAACGACCAGTGTCTTCA
ACGTTGTCAAGGTTGCTAACGAGGAACCTCACATGTACGGCAAGCATGGT
GAGCTTCTGCGTACGCTCGATGACGTGGAAGACGATGCAGTCCGTCGCGC
CAGTGTGCTGAGCCACCGGGCAAAGGACATGGAGAAGGACAGTGACGAGA
ACACCAACAGCGTGAAGGCATAAATGGCGCGGTCATACTTGGGCCTCACA
GGAGGCAAGCTGCAAATCGCTATCAGTGTCATCGCTGGTATGGATTTCTT
GCTGTTCGGTTACGATCAAGGTGTCACTGGTGGTCTGTTGACCCTCCAAT
CGTTCATCAAATACTTTCCAACTATCGCAACCAACGGTGAATACTATGAG
AGCTTGACTAAAGCGCAACAAAGTACCCAGTCGACTCGCCAAGGTGTCGT
TGTCGCTGCGTACAACTTGGGCTGCTTTGCTGGATCGATTCCCACAATTT
GGATTGGCAACATGCTCGGTCGGCGCAAAACTATCTTCGTTGGTTCGTTT
ATTATGTGCATCGGAGCTTTGCTGCAATGCACTTCCTACCAACTCGGGCA
ATTCATTGTTGGACGCTTGGTTACTGGTTTCGGAAACGGCATGAACACCT
CTACCGTGCCCACCTGGCAGTCAGAGTGCTGTAAATCCAACCATCGTGGA
ATGCTAGTCATGATTGAAGGTGCCATGATTACTTGCGGTATCACCATCAG
TTACTGGATTGATTTCGGTCTGCTATTCGCCGATCCAAATGAGGTGGCTT
GGCGATTCCCGCTGGCCTTCCAGATTTTCTTCGCCCTCATTATCCTGGTT
TTCGTTTTGCCTCTTCCCGAGTCGCCCCGTTGGCTAATCCTCAAGGGCCG
CGAGGACGAAGCAAGGACTGTCCTGCGGTCCCTCTTGGGCGACGCTGACG
AGACCTTCATTGAGACGGAATTTACGGCCATCAAGGCTACAGTCTTGGAA
ATGGCCAAGGGTTCGTTCCGTGACATGTTCACCATGACCGAGGACCGCCA
CTTCCACCGCGTGGTCTTAGCCTACGTCAATCAAATGTTCCAACAGATTT
CGGGTATCAACCTGATTACATACTACATCCCCGTTGTGCTGGAGAACCAG
CTGGGTATGACCCTCGAAAACTCCCGCTTGATATCAGCTTGCAACGGGAC
GGAATACTTCCTCGCTTCATGGATTGCCGTGTTCACCATTGAGCACTTTG
GTCGTCGGACACTGATGCTTTTTGGCGCCGCGGGAATGTCAATATCGATG
GTCATCCTTGCCGTCACCGCCAGCATCGGTAGTAACGGAGCCAATATCGC
CTGTATCGTCTTCCTGTTCGTTTTCAATACATTCTTCGCCATTGGCTGGC
TGGGTATGACCTGGCTGTATCCGGCTGAAGTGGTGCCGCTACGGATTCGT
GCTCCGGCTAACGCGCTGGCAACGTCATCGAACTGGATCTTCAACTTCCT
GGTGGTCATGATCACGCCGGTGGCTTTTGACAACATTGGGTACCAGACCT
ACATCATCTTTGCGGTCATCAACGCCTTTATCTTCCCCGTAGTGCTCTTC
TTCTATCCAGAGACGGCCCGCCGATCCCTGGAGGAAATGGATCGTATTTT
CCGCAAAACGACCAGTGTCTTCAACGTTGTCAAGGTTGCTAACGAGGAAC
CTCACATGTACGGCAAGCATGGTGAGCTTCTGCGTACGCTCGATGACGTG
GAAGACGATGCAGTCCGTCGCGCCAGTGTGCTGAGCCACCGGGCAAAGGA
CATGGAGAAGGACAGTGACGAGAACACCAACAGCGTGAAGGCATAAATGG
CGCGGTCATACTTGGGCCTCACAGGAGGCAAGCTGCAAATCGCTATCAGT
GTCATCGCTGGTATGGATTTCTTGCTGTTCGGTTACGATCAAGGTGTCAC
TGGTGGTCTGTTGACCCTCCAATCGTTCATCAAATACTTTCCAACTATCG
CAACCAACGGTGAATACTATGAGAGCTTGACTAAAGCGCAACAAAGTACC
CAGTCGACTCGCCAAGGTGTCGTTGTCGCTGCGTACAACTTGGGCTGCTT
TGCTGGATCGATTCCCACAATTTGGATTGGCAACATGCTCGGTCGGCGCA
AAACTATCTTCGTTGGTTCGTTTATTATGTGCATCGGAGCTTTGCTGCAA
TGCACTTCCTACCAACTCGGGCAATTCATTGTTGGACGCTTGGTTACTGG
TTTCGGAAACGGCATGAACACCTCTACCGTGCCCACCTGGCAGTCAGAGT
GCTGTAAATCCAACCATCGTGGAATGCTAGTCATGATTGAAGGTGCCATG
ATTACTTGCGGTATCACCATCAGTTACTGGATTGATTTCGGTCTGCTATT
CGCCGATCCAAATGAGGTGGCTTGGCGATTCCCGCTGGCCTTCCAGATTT
TCTTCGCCCTCATTATCCTGGTTTTCGTTTTGCCTCTTCCCGAGTCGCCC
CGTTGGCTAATCCTCAAGGGCCGCGAGGACGAAGCAAGGACTGTCCTGCG
GTCCCTCTTGGGCGACGCTGACGAGACCTTCATTGAGACGGAATTTACGG
CCATCAAGGCTACAGTCTTGGAAATGGCCAAGGGTTCGTTCCGTGACATG
TTCACCATGACCGAGGACCGCCACTTCCACCGCGTGGTCTTAGCCTACGT
CAATCAAATGTTCCAACAGATTTCGGGTATCAACCTGATTACATACTACA
TCCCCGTTGTGCTGGAGAACCAGCTGGGTATGACCCTCGAAAACTCCCGC
TTGATATCAGCTTGCAACGGGACGGAATACTTCCTCGCTTCATGGATTGC
CGTGTTCACCATTGAGCACTTTGGTCGTCGGACACTGATGCTTTTTGGCG
CCGCGGGAATGTCAATATCGATGGTCATCCTTGCCGTCACCGCCAGCATC
GGTAGTAACGGAGCCAATATCGCCTGTATCGTCTTCCTGTTCGTTTTCAA
TACATTCTTCGCCATTGGCTGGCTGGGTATGACCTGGCTGTATCCGGCTG
AAGTGGTGCCGCTACGGATTCGTGCTCCGGCTAACGCGCTGGCAACGTCA
TCGAACTGGATCTTCAACTTCCTGGTGGTCATGATCACGCCGGTGGCTTT
TGACAACATTGGGTACCAGACCTACATCATCTTTGCGGTCATCAACGCCT
TTATCTTCCCCGTAGTGCTCTTCTTCTATCCAGAGACGGCCCGCCGATCC
CTGGAGGAAATGGATCGTATTTTCCGCAAAACGACCAGTGTCTTCAACGT
TGTCAAGGTTGCTAACGAGGAACCTCACATGTACGGCAAGCATGGTGAGC
TTCTGCGTACGCTCGATGACGTGGAAGACGATGCAGTCCGTCGCGCCAGT
GTGCTGAGCCACCGGGCAAAGGACATGGAGAAGGACAGTGACGAGAACAC
CAACAGCGTGAAGGCATAAATGGCGCGGTCATACTTGGGCCTCACAGGAG
GCAAGCTGCAAATCGCTATCAGTGTCATCGCTGGTATGGATTTCTTGCTG
TTCGGTTACGATCAAGGTGTCACTGGTGGTCTGTTGACCCTCCAATCGTT
CATCAAATACTTTCCAACTATCGCAACCAACGGTGAATACTATGAGAGCT
TGACTAAAGCGCAACAAAGTACCCAGTCGACTCGCCAAGGTGTCGTTGTC
GCTGCGTACAACTTGGGCTGCTTTGCTGGATCGATTCCCACAATTTGGAT
TGGCAACATGCTCGGTCGGCGCAAAACTATCTTCGTTGGTTCGTTTATTA
TGTGCATCGGAGCTTTGCTGCAATGCACTTCCTACCAACTCGGGCAATTC
ATTGTTGGACGCTTGGTTACTGGTTTCGGAAACGGCATGAACACCTCTAC
CGTGCCCACCTGGCAGTCAGAGTGCTGTAAATCCAACCATCGTGGAATGC
TAGTCATGATTGAAGGTGCCATGATTACTTGCGGTATCACCATCAGTTAC
TGGATTGATTTCGGTCTGCTATTCGCCGATCCAAATGAGGTGGCTTGGCG
ATTCCCGCTGGCCTTCCAGATTTTCTTCGCCCTCATTATCCTGGTTTTCG
TTTTGCCTCTTCCCGAGTCGCCCCGTTGGCTAATCCTCAAGGGCCGCGAG
GACGAAGCAAGGACTGTCCTGCGGTCCCTCTTGGGCGACGCTGACGAGAC
CTTCATTGAGACGGAATTTACGGCCATCAAGGCTACAGTCTTGGAAATGG
CCAAGGGTTCGTTCCGTGACATGTTCACCATGACCGAGGACCGCCACTTC
CACCGCGTGGTCTTAGCCTACGTCAATCAAATGTTCCAACAGATTTCGGG
TATCAACCTGATTACATACTACATCCCCGTTGTGCTGGAGAACCAGCTGG
GTATGACCCTCGAAAACTCCCGCTTGATATCAGCTTGCAACGGGACGGAA
TACTTCCTCGCTTCATGGATTGCCGTGTTCACCATTGAGCACTTTGGTCG
TCGGACACTGATGCTTTTTGGCGCCGCGGGAATGTCAATATCGATGGTCA
TCCTTGCCGTCACCGCCAGCATCGGTAGTAACGGAGCCAATATCGCCTGT
ATCGTCTTCCTGTTCGTTTTCAATACATTCTTCGCCATTGGCTGGCTGGG
TATGACCTGGCTGTATCCGGCTGAAGTGGTGCCGCTACGGATTCGTGCTC
CGGCTAACGCGCTGGCAACGTCATCGAACTGGATCTTCAACTTCCTGGTG
GTCATGATCACGCCGGTGGCTTTTGACAACATTGGGTACCAGACCTACAT
CATCTTTGCGGTCATCAACGCCTTTATCTTCCCCGTAGTGCTCTTCTTCT
ATCCAGAGACGGCCCGCCGATCCCTGGAGGAAATGGATCGTATTTTCCGC
AAAACGACCAGTGTCTTCAACGTTGTCAAGGTTGCTAACGAGGAACCTCA
CATGTACGGCAAGCATGGTGAGCTTCTGCGTACGCTCGATGACGTGGAAG
ACGATGCAGTCCGTCGCGCCAGTGTGCTGAGCCACCGGGCAAAGGACATG
GAGAAGGACAGTGACGAGAACACCAACAGCGTGAAGGCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000708CBS51388_000708Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000708-T1.exon1CBS51388_000708-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000708-T1.exon2CBS51388_000708-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000708-T1.exon3CBS51388_000708-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000708-T1.exon4CBS51388_000708-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000708-T1.cdsCBS51388_000708-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000708-T1CBS51388_000708-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2081473..2083308 +
Powered by Drupal