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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2140518..2141287- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000726-T1 ID=CBS51388_000726-T1|Name=CBS51388_000726-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=770bp|location=Sequence derived from alignment at An01:2140518..2141287- (Aspergillus niger CBS 513.88)
ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTA
CCAAGAGCCCCCCGAATCCATTGAGCACACCAGCGACCAGGCTGCTCTGC
CCAATTTGAATGCGAACTGGGTCAACGCCAAGGGTGAGTAGTGGCCACCT
CCATCTCCTCCATTTCCCCCCCCCCCCCCATCATCACCACTCCGTCGCTG
CAGAAGGAGGGGTTCATGTTCCGGCGGGGGACTTGTAACCAACATATGTC
CCCATGACATCCATGACACCCCCAGTGGCTGACCACGTTGTACTACCATT
TAGGAGCCTGGACCATCCACTTCGTTCTCATCATCGCCCTCAAGATCTTG
TTCGACATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTCACCAA
CATCAGCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCA
TCCCTTTTGAATTCAACGCCGGCGCGTACGACAACCTCAACATGTGGGAG
CAGATCGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTCCTCTG
CGTGCCCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACT
TGACGTATTTCACCATCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCG
AAATTGCCGTTTGTATGTATTATCCTTGCCTTCTGTGGTGGGGTGAGTCA
TGAATGCTAACTGCTGTGATAGTCGCACCGTCTGCGAATAGGTCTCTTCT
CTGATATACCCGAAGAGTAG back to topCoding sequence (CDS) from alignment at An01:2140518..2141287- >CBS51388_000726-T1 ID=CBS51388_000726-T1|Name=CBS51388_000726-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1620bp|location=Sequence derived from alignment at An01:2140518..2141287- (Aspergillus niger CBS 513.88)
TCGCACCGTCTGCGAATAGGTCTCTTCTCTGATATACCCGAAGAGTAGGA
GCCTGGACCATCCACTTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGA
CATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTCACCAACATCA
GCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCT
TTTGAATTCAACGCCGGCGCGTACGACAACCTCAACATGTGGGAGCAGAT
CGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTCCTCTGCGTGC
CCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACG
TATTTCACCATCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATT
GCCGTTTATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTA
TCATCTACCAAGAGCCCCCCGAATCCATTGAGCACACCAGCGACCAGGCT
GCTCTGCCCAATTTGAATGCGAACTGGGTCAACGCCAAGGTCGCACCGTC
TGCGAATAGGTCTCTTCTCTGATATACCCGAAGAGTAGGAGCCTGGACCA
TCCACTTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCC
GGTGTCTCGCAGGAGACTTCATGGACACTCACCAACATCAGCTACATGTT
CGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCTTTTGAATTCA
ACGCCGGCGCGTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGA
GATCAGTATACGCCCACAAAGAAGTTCCTCCTCTGCGTGCCCATTTGTCT
CTTCCTGCTTAGCACACATTATACCCACTACGACTTGACGTATTTCACCA
TCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTATG
GCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCA
AGAGCCCCCCGAATCCATTGAGCACACCAGCGACCAGGCTGCTCTGCCCA
ATTTGAATGCGAACTGGGTCAACGCCAAGGTCGCACCGTCTGCGAATAGG
TCTCTTCTCTGATATACCCGAAGAGTAGGAGCCTGGACCATCCACTTCGT
TCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTCTCGC
AGGAGACTTCATGGACACTCACCAACATCAGCTACATGTTCGGTTCTTTC
CTCATGTTCCACTGGGTGCGGGGCATCCCTTTTGAATTCAACGCCGGCGC
GTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAGTATA
CGCCCACAAAGAAGTTCCTCCTCTGCGTGCCCATTTGTCTCTTCCTGCTT
AGCACACATTATACCCACTACGACTTGACGTATTTCACCATCAATTTCCT
TGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTATGGCCCAGGGCA
AGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCAAGAGCCCCCC
GAATCCATTGAGCACACCAGCGACCAGGCTGCTCTGCCCAATTTGAATGC
GAACTGGGTCAACGCCAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005789 | endoplasmic reticulum membrane |
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264F60 |
| DBxref | InterPro:IPR007203 |
| DBxref | PFAM:PF04061 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2140518..2141287 - |
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