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CBS51388_000727-T1, CBS51388_000727-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000727-T1
Unique NameCBS51388_000727-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2143023..2144929+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000727-T1 ID=CBS51388_000727-T1|Name=CBS51388_000727-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1907bp|location=Sequence derived from alignment at An01:2143023..2144929+ (Aspergillus niger CBS 513.88)
ATGCCTGATTCTCCATCCGACGACAACGATTCCAGAACCGCCGCAGTCGG
CCCCCGCGCTCAGACAAACGGCTCCCGCCACTCCTCGCGTCAGAGCTCCC
ACGATCCCAACCCGAACCCGCGGAAAAGGCAACGCCGCAGTCGGTCCGCC
GACGTACGCAATGTCCGCGACTTCGTCCCCCAAGGCGCTACCTTCAGTGA
AGCGGGACTTGATGTCGATGTAGATGCTACTTCATCTTCCGGTTCCGACA
GTGACGACGGGTCCTCCGAAGGTGGTGATGCGCAGGCCGAGTCCGCGCCC
GCGCCGCCGGCGAGCTGGAATAAAGGCAGCAAGAGTGCGATTCGGACATC
GCTTCGCAGTCGCGCGAAGCCAGAGGAGAGCAAGCCCGCGTCACAGTTCG
ACACTGTCAATGATAAGTTCTGGCGCAGTCGCAGTGAATCCGTCTCGTCC
CATGGCGATCACGAGACGGAAGCATCAAAACCCGCCCAAGTCGATGGCAT
AGAGGAGGGCGAAGTGAATGAGGAGGAAGCTTCGGACGAGTCCAGCCAGA
TGCAGCTCTCCGGCGACTCAGATGACTCAGAGTCTCTGGGTTCGGAAGCA
GATGACTCGATCTTGTTGAATATTGGGTCCCGGAACGGTCAAAATCTCGG
TCAGGACCAGGATGGCTTAATCACCCCGGACGGCGACGACGACTACGACC
CCGAGGCATTACCAGTCTCTAACGGCACGAAAACCAACGGACAAACCTCC
ACAGACCAATCTAAAGAGGACGCACTCCTCCGCTTCTCGAAAAAGTACCC
GACTGCCCCTTCTACCCTCGCCGACCTCGACCGCGAAGACATGGACATCC
AAGCGAAATACCGCTTCTACGACCGCGACGTTAACGCCATCGACCTACAA
CTCCCCATCGCCTGCACAGAATGTCTACTCGAGGGACACCTCGCAGAAGT
CTGCCCGTCCCGAGAGGTACGCCCACCCCTCCCTCTCCCTCTTCCCCATC
ATCATCATCACCAACTAACCAACCATTCTAGTGCATACACTGCGGCTCCT
GGAACCAGCACCAAAGCAGCTTCTGCCCGACCTGGCGCCGTTGCCAACGC
TGTCGCGCGCGCGGCCACGACGAAGACAACTGCCCATCCGCACTGAAAGG
CTCCGCCAGCGAATTCCCGTGCGAACTATGCGGCTCGACCACGCATATCG
AAGAAGACTGCGACCTGATGTGGAAGCTCACTACTACCCGCCCGGACTCC
GAACCCGTCCTCGTCTCCCTCTCCTGCGCCCACTGCACCAGCAACCGCCA
CCTCATTGGCGACTGTCCGTCCCTCTCATCCACCCGAACCCTGCTCTCCT
CTTCCTGGACCGTCCGCGGCATCGACCCCAACATGATCACCAACATCAAC
TCCGTCGTGAACCACCGACGTAACAACAACAATAACAACAATAGCAATAG
CAATAACAGAGGAGGCCTCAAGATCCGCGGCCGCGCCGACCACCGCCCGC
CTTCTTCCGACAGCGACGACATGATGGCTCATCGGCGTCCGCCTGTCCAT
CGCGGCGGCGGCGGTAGCAACCGTGGCAACATTCGCATTGGAAGCGGCAT
CGGCAGAGGGAATAAGAATATTTCGAGTAATGGGTATCGCGATAGATCTG
ATTTCGGCCCGTCGAGGCAGCGGTCGATGTCGCCGAATCCTCGTCCGACG
CGCGGGAGAGGTGGGAAGGATAGTTGGCAAGGGGGTGGTGGACGGGGGAA
GTCGTCGGGTGGTGGTGGTGGTGGTAGCCGGCCTCCGTCTAGAGGTGGGA
ATACGGGTCGTGGGGGTGGACGTGGTGGGAAGAGAGGTGGTGGTGGGGAT
GCGTATCGACCGTTGCCGAGTGCGGCGAAGAAGGCGTGGGATAAGTATCG
GTTGTGA
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Coding sequence (CDS) from alignment at An01:2143023..2144929+

>CBS51388_000727-T1 ID=CBS51388_000727-T1|Name=CBS51388_000727-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3684bp|location=Sequence derived from alignment at An01:2143023..2144929+ (Aspergillus niger CBS 513.88)
ATGCCTGATTCTCCATCCGACGACAACGATTCCAGAACCGCCGCAGTCGG
CCCCCGCGCTCAGACAAACGGCTCCCGCCACTCCTCGCGTCAGAGCTCCC
ACGATCCCAACCCGAACCCGCGGAAAAGGCAACGCCGCAGTCGGTCCGCC
GACGTACGCAATGTCCGCGACTTCGTCCCCCAAGGCGCTACCTTCAGTGA
AGCGGGACTTGATGTCGATGTAGATGCTACTTCATCTTCCGGTTCCGACA
GTGACGACGGGTCCTCCGAAGGTGGTGATGCGCAGGCCGAGTCCGCGCCC
GCGCCGCCGGCGAGCTGGAATAAAGGCAGCAAGAGTGCGATTCGGACATC
GCTTCGCAGTCGCGCGAAGCCAGAGGAGAGCAAGCCCGCGTCACAGTTCG
ACACTGTCAATGATAAGTTCTGGCGCAGTCGCAGTGAATCCGTCTCGTCC
CATGGCGATCACGAGACGGAAGCATCAAAACCCGCCCAAGTCGATGGCAT
AGAGGAGGGCGAAGTGAATGAGGAGGAAGCTTCGGACGAGTCCAGCCAGA
TGCAGCTCTCCGGCGACTCAGATGACTCAGAGTCTCTGGGTTCGGAAGCA
GATGACTCGATCTTGTTGAATATTGGGTCCCGGAACGGTCAAAATCTCGG
TCAGGACCAGGATGGCTTAATCACCCCGGACGGCGACGACGACTACGACC
CCGAGGCATTACCAGTCTCTAACGGCACGAAAACCAACGGACAAACCTCC
ACAGACCAATCTAAAGAGGACGCACTCCTCCGCTTCTCGAAAAAGTACCC
GACTGCCCCTTCTACCCTCGCCGACCTCGACCGCGAAGACATGGACATCC
AAGCGAAATACCGCTTCTACGACCGCGACGTTAACGCCATCGACCTACAA
CTCCCCATCGCCTGCACAGAATGTCTACTCGAGGGACACCTCGCAGAAGT
CTGCCCGTCCCGAGAGTGCATACACTGCGGCTCCTGGAACCAGCACCAAA
GCAGCTTCTGCCCGACCTGGCGCCGTTGCCAACGCTGTCGCGCGCGCGGC
CACGACGAAGACAACTGCCCATCCGCACTGAAAGGCTCCGCCAGCGAATT
CCCGTGCGAACTATGCGGCTCGACCACGCATATCGAAGAAGACTGCGACC
TGATGTGGAAGCTCACTACTACCCGCCCGGACTCCGAACCCGTCCTCGTC
TCCCTCTCCTGCGCCCACTGCACCAGCAACCGCCACCTCATTGGCGACTG
TCCGTCCCTCTCATCCACCCGAACCCTGCTCTCCTCTTCCTGGACCGTCC
GCGGCATCGACCCCAACATGATCACCAACATCAACTCCGTCGTGAACCAC
CGACGTAACAACAACAATAACAACAATAGCAATAGCAATAACAGAGGAGG
CCTCAAGATCCGCGGCCGCGCCGACCACCGCCCGCCTTCTTCCGACAGCG
ACGACATGATGGCTCATCGGCGTCCGCCTGTCCATCGCGGCGGCGGCGGT
AGCAACCGTGGCAACATTCGCATTGGAAGCGGCATCGGCAGAGGGAATAA
GAATATTTCGAGTAATGGGTATCGCGATAGATCTGATTTCGGCCCGTCGA
GGCAGCGGTCGATGTCGCCGAATCCTCGTCCGACGCGCGGGAGAGGTGGG
AAGGATAGTTGGCAAGGGGGTGGTGGACGGGGGAAGTCGTCGGGTGGTGG
TGGTGGTGGTAGCCGGCCTCCGTCTAGAGGTGGGAATACGGGTCGTGGGG
GTGGACGTGGTGGGAAGAGAGGTGGTGGTGGGGATGCGTATCGACCGTTG
CCGAGTGCGGCGAAGAAGGCGTGGGATAAGTATCGGTTGTGAATGCCTGA
TTCTCCATCCGACGACAACGATTCCAGAACCGCCGCAGTCGGCCCCCGCG
CTCAGACAAACGGCTCCCGCCACTCCTCGCGTCAGAGCTCCCACGATCCC
AACCCGAACCCGCGGAAAAGGCAACGCCGCAGTCGGTCCGCCGACGTACG
CAATGTCCGCGACTTCGTCCCCCAAGGCGCTACCTTCAGTGAAGCGGGAC
TTGATGTCGATGTAGATGCTACTTCATCTTCCGGTTCCGACAGTGACGAC
GGGTCCTCCGAAGGTGGTGATGCGCAGGCCGAGTCCGCGCCCGCGCCGCC
GGCGAGCTGGAATAAAGGCAGCAAGAGTGCGATTCGGACATCGCTTCGCA
GTCGCGCGAAGCCAGAGGAGAGCAAGCCCGCGTCACAGTTCGACACTGTC
AATGATAAGTTCTGGCGCAGTCGCAGTGAATCCGTCTCGTCCCATGGCGA
TCACGAGACGGAAGCATCAAAACCCGCCCAAGTCGATGGCATAGAGGAGG
GCGAAGTGAATGAGGAGGAAGCTTCGGACGAGTCCAGCCAGATGCAGCTC
TCCGGCGACTCAGATGACTCAGAGTCTCTGGGTTCGGAAGCAGATGACTC
GATCTTGTTGAATATTGGGTCCCGGAACGGTCAAAATCTCGGTCAGGACC
AGGATGGCTTAATCACCCCGGACGGCGACGACGACTACGACCCCGAGGCA
TTACCAGTCTCTAACGGCACGAAAACCAACGGACAAACCTCCACAGACCA
ATCTAAAGAGGACGCACTCCTCCGCTTCTCGAAAAAGTACCCGACTGCCC
CTTCTACCCTCGCCGACCTCGACCGCGAAGACATGGACATCCAAGCGAAA
TACCGCTTCTACGACCGCGACGTTAACGCCATCGACCTACAACTCCCCAT
CGCCTGCACAGAATGTCTACTCGAGGGACACCTCGCAGAAGTCTGCCCGT
CCCGAGAGTGCATACACTGCGGCTCCTGGAACCAGCACCAAAGCAGCTTC
TGCCCGACCTGGCGCCGTTGCCAACGCTGTCGCGCGCGCGGCCACGACGA
AGACAACTGCCCATCCGCACTGAAAGGCTCCGCCAGCGAATTCCCGTGCG
AACTATGCGGCTCGACCACGCATATCGAAGAAGACTGCGACCTGATGTGG
AAGCTCACTACTACCCGCCCGGACTCCGAACCCGTCCTCGTCTCCCTCTC
CTGCGCCCACTGCACCAGCAACCGCCACCTCATTGGCGACTGTCCGTCCC
TCTCATCCACCCGAACCCTGCTCTCCTCTTCCTGGACCGTCCGCGGCATC
GACCCCAACATGATCACCAACATCAACTCCGTCGTGAACCACCGACGTAA
CAACAACAATAACAACAATAGCAATAGCAATAACAGAGGAGGCCTCAAGA
TCCGCGGCCGCGCCGACCACCGCCCGCCTTCTTCCGACAGCGACGACATG
ATGGCTCATCGGCGTCCGCCTGTCCATCGCGGCGGCGGCGGTAGCAACCG
TGGCAACATTCGCATTGGAAGCGGCATCGGCAGAGGGAATAAGAATATTT
CGAGTAATGGGTATCGCGATAGATCTGATTTCGGCCCGTCGAGGCAGCGG
TCGATGTCGCCGAATCCTCGTCCGACGCGCGGGAGAGGTGGGAAGGATAG
TTGGCAAGGGGGTGGTGGACGGGGGAAGTCGTCGGGTGGTGGTGGTGGTG
GTAGCCGGCCTCCGTCTAGAGGTGGGAATACGGGTCGTGGGGGTGGACGT
GGTGGGAAGAGAGGTGGTGGTGGGGATGCGTATCGACCGTTGCCGAGTGC
GGCGAAGAAGGCGTGGGATAAGTATCGGTTGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000727CBS51388_000727Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000727-T1.exon1CBS51388_000727-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000727-T1.exon2CBS51388_000727-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000727-T1.cdsCBS51388_000727-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000727-T1CBS51388_000727-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036875
DBxrefInterPro:IPR001878
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2143023..2144929 +
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