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CBS51388_000728-T1, CBS51388_000728-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000728-T1
Unique NameCBS51388_000728-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2145119..2146167-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000728-T1 ID=CBS51388_000728-T1|Name=CBS51388_000728-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1049bp|location=Sequence derived from alignment at An01:2145119..2146167- (Aspergillus niger CBS 513.88)
ATGGCCTCCCTGAACAATTATACTCTCCGCCAACGGCGATTTGCCCCTCT
CCTCCCCTCTTCTTCCTCTTCTTCCTCTGCACCCCCACTCCGCGGAATCG
TCTTTGACGTCGACGGCACACTATGGTAATACCTATACCTTCTTCAGCTA
CCAATTATACTACTAACTAAAGATGTTACCACATTCAGTCTTCCTCAAAA
CCACATGTTCTCCGAAATGCGGTACTTCCCCCACTCCCGCCCCCTCAATA
TAACCAAAACTAAAAAATGAATGATACAGACAAGCCCTCAACATCTCCCC
CAAAGTCGACATCCTGCACCACATCAGCCGCCTCCCGACCCCCGAATCGC
GTCTCGAAGCCACAAACAAAATCAAAGCCATTGAGCGCACCGCCATGGAA
TCACAGCAGCCTCAACCGGGCTTAGTGGAGTTGATGGATTTCTTGGAGGA
GAGGGGGGTCAAGAGAGCTTTGTGTACGAGGAATTTTGAGTAAGCCCTCT
TCCCCTTTTCCCAGTTTCTGTTCGAAGTACAGTATAAGAAGGCAAAGATA
CTAATGTAGGTGTGGTGTAGAGCACCCGTCCTCAACCTCCTCAACAACCA
TCTCCCTGCACATGTCTTCCTCCCTATAGTGACGCGTGAAACACCGGGGT
TGTTGCCCAAGCCGGATCCAGCAGGGATATTGCATATTGCGAGGGAGTGG
GGGGTGCAGGATGAGGGGGGGATGGCCGGGGGGTTGATTATGGTATGTTC
TATTCTAAATCCATTTACTTATTCGGTTCTCTAGGGAGAAAGTGGTGGAC
TAATCATTGTTATTCCGTGTACAGGTTGGTGATAGTCTCGACGACATGAC
GGCTGGACATACCGCCGGTGCGGCGACAGTGCTCTTGCTCAACGACCATA
ACGGACATCTTAAAGACCACGCGCATACGGATCTCTGTATCGAGAGGCTA
GATGAGTTGATTCGCATCTTAGACGAAGGGTTCGTGGGACATCGCGGGGG
TGAGAAGGTGCCTACGTCTACGGATAATGCCATGGAGAATGGCGTATAG
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Coding sequence (CDS) from alignment at An01:2145119..2146167-

>CBS51388_000728-T1 ID=CBS51388_000728-T1|Name=CBS51388_000728-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3825bp|location=Sequence derived from alignment at An01:2145119..2146167- (Aspergillus niger CBS 513.88)
GTTGGTGATAGTCTCGACGACATGACGGCTGGACATACCGCCGGTGCGGC
GACAGTGCTCTTGCTCAACGACCATAACGGACATCTTAAAGACCACGCGC
ATACGGATCTCTGTATCGAGAGGCTAGATGAGTTGATTCGCATCTTAGAC
GAAGGGTTCGTGGGACATCGCGGGGGTGAGAAGGTGCCTACGTCTACGGA
TAATGCCATGGAGAATGGCGTATAGAGCACCCGTCCTCAACCTCCTCAAC
AACCATCTCCCTGCACATGTCTTCCTCCCTATAGTGACGCGTGAAACACC
GGGGTTGTTGCCCAAGCCGGATCCAGCAGGGATATTGCATATTGCGAGGG
AGTGGGGGGTGCAGGATGAGGGGGGGATGGCCGGGGGGTTGATTATGACA
AGCCCTCAACATCTCCCCCAAAGTCGACATCCTGCACCACATCAGCCGCC
TCCCGACCCCCGAATCGCGTCTCGAAGCCACAAACAAAATCAAAGCCATT
GAGCGCACCGCCATGGAATCACAGCAGCCTCAACCGGGCTTAGTGGAGTT
GATGGATTTCTTGGAGGAGAGGGGGGTCAAGAGAGCTTTGTGTACGAGGA
ATTTTGATCTTCCTCAAAACCACATGTTCTCCGAAATGCGATGGCCTCCC
TGAACAATTATACTCTCCGCCAACGGCGATTTGCCCCTCTCCTCCCCTCT
TCTTCCTCTTCTTCCTCTGCACCCCCACTCCGCGGAATCGTCTTTGACGT
CGACGGCACACTATGGTTGGTGATAGTCTCGACGACATGACGGCTGGACA
TACCGCCGGTGCGGCGACAGTGCTCTTGCTCAACGACCATAACGGACATC
TTAAAGACCACGCGCATACGGATCTCTGTATCGAGAGGCTAGATGAGTTG
ATTCGCATCTTAGACGAAGGGTTCGTGGGACATCGCGGGGGTGAGAAGGT
GCCTACGTCTACGGATAATGCCATGGAGAATGGCGTATAGAGCACCCGTC
CTCAACCTCCTCAACAACCATCTCCCTGCACATGTCTTCCTCCCTATAGT
GACGCGTGAAACACCGGGGTTGTTGCCCAAGCCGGATCCAGCAGGGATAT
TGCATATTGCGAGGGAGTGGGGGGTGCAGGATGAGGGGGGGATGGCCGGG
GGGTTGATTATGACAAGCCCTCAACATCTCCCCCAAAGTCGACATCCTGC
ACCACATCAGCCGCCTCCCGACCCCCGAATCGCGTCTCGAAGCCACAAAC
AAAATCAAAGCCATTGAGCGCACCGCCATGGAATCACAGCAGCCTCAACC
GGGCTTAGTGGAGTTGATGGATTTCTTGGAGGAGAGGGGGGTCAAGAGAG
CTTTGTGTACGAGGAATTTTGATCTTCCTCAAAACCACATGTTCTCCGAA
ATGCGATGGCCTCCCTGAACAATTATACTCTCCGCCAACGGCGATTTGCC
CCTCTCCTCCCCTCTTCTTCCTCTTCTTCCTCTGCACCCCCACTCCGCGG
AATCGTCTTTGACGTCGACGGCACACTATGGTTGGTGATAGTCTCGACGA
CATGACGGCTGGACATACCGCCGGTGCGGCGACAGTGCTCTTGCTCAACG
ACCATAACGGACATCTTAAAGACCACGCGCATACGGATCTCTGTATCGAG
AGGCTAGATGAGTTGATTCGCATCTTAGACGAAGGGTTCGTGGGACATCG
CGGGGGTGAGAAGGTGCCTACGTCTACGGATAATGCCATGGAGAATGGCG
TATAGAGCACCCGTCCTCAACCTCCTCAACAACCATCTCCCTGCACATGT
CTTCCTCCCTATAGTGACGCGTGAAACACCGGGGTTGTTGCCCAAGCCGG
ATCCAGCAGGGATATTGCATATTGCGAGGGAGTGGGGGGTGCAGGATGAG
GGGGGGATGGCCGGGGGGTTGATTATGACAAGCCCTCAACATCTCCCCCA
AAGTCGACATCCTGCACCACATCAGCCGCCTCCCGACCCCCGAATCGCGT
CTCGAAGCCACAAACAAAATCAAAGCCATTGAGCGCACCGCCATGGAATC
ACAGCAGCCTCAACCGGGCTTAGTGGAGTTGATGGATTTCTTGGAGGAGA
GGGGGGTCAAGAGAGCTTTGTGTACGAGGAATTTTGATCTTCCTCAAAAC
CACATGTTCTCCGAAATGCGATGGCCTCCCTGAACAATTATACTCTCCGC
CAACGGCGATTTGCCCCTCTCCTCCCCTCTTCTTCCTCTTCTTCCTCTGC
ACCCCCACTCCGCGGAATCGTCTTTGACGTCGACGGCACACTATGGTTGG
TGATAGTCTCGACGACATGACGGCTGGACATACCGCCGGTGCGGCGACAG
TGCTCTTGCTCAACGACCATAACGGACATCTTAAAGACCACGCGCATACG
GATCTCTGTATCGAGAGGCTAGATGAGTTGATTCGCATCTTAGACGAAGG
GTTCGTGGGACATCGCGGGGGTGAGAAGGTGCCTACGTCTACGGATAATG
CCATGGAGAATGGCGTATAGAGCACCCGTCCTCAACCTCCTCAACAACCA
TCTCCCTGCACATGTCTTCCTCCCTATAGTGACGCGTGAAACACCGGGGT
TGTTGCCCAAGCCGGATCCAGCAGGGATATTGCATATTGCGAGGGAGTGG
GGGGTGCAGGATGAGGGGGGGATGGCCGGGGGGTTGATTATGACAAGCCC
TCAACATCTCCCCCAAAGTCGACATCCTGCACCACATCAGCCGCCTCCCG
ACCCCCGAATCGCGTCTCGAAGCCACAAACAAAATCAAAGCCATTGAGCG
CACCGCCATGGAATCACAGCAGCCTCAACCGGGCTTAGTGGAGTTGATGG
ATTTCTTGGAGGAGAGGGGGGTCAAGAGAGCTTTGTGTACGAGGAATTTT
GATCTTCCTCAAAACCACATGTTCTCCGAAATGCGATGGCCTCCCTGAAC
AATTATACTCTCCGCCAACGGCGATTTGCCCCTCTCCTCCCCTCTTCTTC
CTCTTCTTCCTCTGCACCCCCACTCCGCGGAATCGTCTTTGACGTCGACG
GCACACTATGGTTGGTGATAGTCTCGACGACATGACGGCTGGACATACCG
CCGGTGCGGCGACAGTGCTCTTGCTCAACGACCATAACGGACATCTTAAA
GACCACGCGCATACGGATCTCTGTATCGAGAGGCTAGATGAGTTGATTCG
CATCTTAGACGAAGGGTTCGTGGGACATCGCGGGGGTGAGAAGGTGCCTA
CGTCTACGGATAATGCCATGGAGAATGGCGTATAGAGCACCCGTCCTCAA
CCTCCTCAACAACCATCTCCCTGCACATGTCTTCCTCCCTATAGTGACGC
GTGAAACACCGGGGTTGTTGCCCAAGCCGGATCCAGCAGGGATATTGCAT
ATTGCGAGGGAGTGGGGGGTGCAGGATGAGGGGGGGATGGCCGGGGGGTT
GATTATGACAAGCCCTCAACATCTCCCCCAAAGTCGACATCCTGCACCAC
ATCAGCCGCCTCCCGACCCCCGAATCGCGTCTCGAAGCCACAAACAAAAT
CAAAGCCATTGAGCGCACCGCCATGGAATCACAGCAGCCTCAACCGGGCT
TAGTGGAGTTGATGGATTTCTTGGAGGAGAGGGGGGTCAAGAGAGCTTTG
TGTACGAGGAATTTTGATCTTCCTCAAAACCACATGTTCTCCGAAATGCG
ATGGCCTCCCTGAACAATTATACTCTCCGCCAACGGCGATTTGCCCCTCT
CCTCCCCTCTTCTTCCTCTTCTTCCTCTGCACCCCCACTCCGCGGAATCG
TCTTTGACGTCGACGGCACACTATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000728CBS51388_000728Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000728-T1CBS51388_000728-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000728-T1.cdsCBS51388_000728-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000728-T1.exon5CBS51388_000728-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_000728-T1.exon4CBS51388_000728-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000728-T1.exon3CBS51388_000728-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000728-T1.exon2CBS51388_000728-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000728-T1.exon1CBS51388_000728-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR023214
DBxrefInterPro:IPR041492
DBxrefPFAM:PF13242
DBxrefPFAM:PF13419
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2145119..2146167 -
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