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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2202161..2204284+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000744-T1 ID=CBS51388_000744-T1|Name=CBS51388_000744-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2124bp|location=Sequence derived from alignment at An01:2202161..2204284+ (Aspergillus niger CBS 513.88)
ATGACCACCTCTGCCTACTACGTTACGCCCCCACCGGTCGGGATAGGTTG
CCTTCGCCATCATGAGCGGCCAGGTTGATGCGCTCTATATCTATGATGAG
CAGAGGCACGCAGTTCCCTCCAATGTTCTGACTACCAGCAGTCACTGACC
TGTCCTCTTCCAGCAATCCGATCGTCGAGCAGGTCTATCGCTCCCGTCCG
CCCTCCGCATCGGCCATTCTTCCCCTCTATAATGCCTATGCAGCTCCGCG
CCCATCACTCATCTACTTTCCAAATACAACTCCGCCGGTGACAGTGTTTT
CGGTAGTGCAGTCCAACCTACTGTTTTTGGCGCTGTCCGAGGTTGACACG
GAACCGCTGCTTGCCCTGGAATTCATTCATCGGGTTGTTGATGTTCTCGA
GGACTTCGTCGGGGCACCTTTGCTTTCCACCAAGATCCAGGCGAATTATG
ATGTGGTTGCACAGCTTCTGCACGAAATGTGCGATGCGGGGATTGTCTGC
AATACAGAGCCCAATGCGCTACAGGAGGTAGTGGAAATGCCGGGGTGGAT
GGGGAAGCTGTTAGGCGGCGTTGGATTGCCTGGGTGAGTGCCCACCGTTA
CGGGATGGAGGTCACCATACTATTTACAGTGAACTGACGGCCTTCGTTAT
GCGCAGGTCATCCACACCGATTCTGGGACAACCCAGTGCCATGAAGCAAT
CAGCCGCCGCCGCGACCCAAGGACCTGCGATCCCCTGGAGAAAGTCCGGA
GTAAGACACACTTCCAACGAGCTATATGTTGATATTATTGAGTCACTTTC
CGTGACGATGGCGCCATCAGGACGACTGCTCTCTGCAATGTCTTCCGGTA
CTATCGCCTTCACCGCCAAAATATCCGGTGTACCCGATCTGCTTCTTTCG
TTAACAGCGCCCGGTGGTCAGAAAGCCTTGGGACGCAAGCTGGAGCTGCC
GGTATTTCACCCATGTGTGCGCTTGGCGCGCTGGCGGGAGCACCCTGGCG
AGCTCAGTTTTGTACCACCAGACGGTCGGTTCATTCTTGCCGGATACGAG
GTGGACCTCATGCCAACAGACCCTACACTTGATCAACCCCCGAGTCATAT
GGAGAAGCTTTTCTTGCCGGCTATTGTGGACATCCGTAAATCGCTTGGGC
CGACTGGCTCAGACTTCGAGGTCCGCCTTATTCTCAACACAAACTTCCCG
GGATACTCATCCTCTAACCGACCTGGGGTCGGGCGTAGCGGATCAGGCAC
GTCTACACCCTCTTTCCTCGGGGGTGGAGGCGGCAACTCCTCGGCGCCAG
TGCTAGAAGAGGTTGTGGTGAGCGTCCCGATCCCGAAGTCGGTCCGGAAC
ATCACAGACATGCAAGCCAGCCGAGGAGAGGCTTTATTCTCACCGGGCAA
CGGCGTATTAGAATGGCGCGTGCCGACTAAAGATGCCGGCACAATCTCCG
GAACGGCGACACTCCGGTGCACCGTCGTAGGACACTACGCGGATGACGAG
CTGGACGACGACGTCGAAGAACTCGACGCAGACACCAACCTCCTGCAGGG
CTACTACGACGCCAGCGCGTCTTACCAGAACCCTGAAGCAGACACGACGA
AACGCAAGACTAAGAAAAAGAAGAAGAAGAAGGTTGTCAAGAAATCTTCT
TCCCGCGCAGCGGCAGCGGCAGCGGCAGCAGAAGCAGAAGCCTCAGCTTC
CTCGCCCGCTGAACACCTTTCCTTGAACCCCGAGGATCCCGAACAACTCG
AACATACGCCTACTCCTGAACCCGAACAATCCCAGACGCTAACACCCCCC
GTTCAATCATCTTCGCCGCAACCTCCACCGTCACTTCCCCGGTCACAGTC
ACAGTCGCAGAAACAATCACCCAGCCGAGCTTACTCTGATTCCTCCATCT
TCCTTTCGGCGCCCCGTAAAACCAAGACCCAACTAAACGCGACACTTATG
CCTAATTCGGCGGCTGTGTCGTTCTCTGTCCGTGGCTGGCTTCCCTCGGG
GCTCAAGGTAGAGAGCCTGAACATCGATCCGCGGCGGAGTCGCGGACTAG
GCGAGGGAGTGAAACCATATAAGGGAGTGAAATATATCTGTATGAGTCGG
AAGGGAGTGGAGCGGAGATGCTAG back to topCoding sequence (CDS) from alignment at An01:2202161..2204284+ >CBS51388_000744-T1 ID=CBS51388_000744-T1|Name=CBS51388_000744-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5949bp|location=Sequence derived from alignment at An01:2202161..2204284+ (Aspergillus niger CBS 513.88)
ATGACCACCTCTGCCTACTACGTTACGCCCCCACCGGTCGGGATAGGTTG
CCTTCGCCATCATGAGCGGCCAGTCACTGACCTGTCCTCTTCCAGCAATC
CGATCGTCGAGCAGGTCTATCGCTCCCGTCCGCCCTCCGCATCGGCCATT
CTTCCCCTCTATAATGCCTATGCAGCTCCGCGCCCATCACTCATCTACTT
TCCAAATACAACTCCGCCGGTGACAGTGTTTTCGGTAGTGCAGTCCAACC
TACTGTTTTTGGCGCTGTCCGAGGTTGACACGGAACCGCTGCTTGCCCTG
GAATTCATTCATCGGGTTGTTGATGTTCTCGAGGACTTCGTCGGGGCACC
TTTGCTTTCCACCAAGATCCAGGCGAATTATGATGTGGTTGCACAGCTTC
TGCACGAAATGTGCGATGCGGGGATTGTCTGCAATACAGAGCCCAATGCG
CTACAGGAGGTAGTGGAAATGCCGGGGTGGATGGGGAAGCTGTTAGGCGG
CGTTGGATTGCCTGGGTCATCCACACCGATTCTGGGACAACCCAGTGCCA
TGAAGCAATCAGCCGCCGCCGCGACCCAAGGACCTGCGATCCCCTGGAGA
AAGTCCGGAGTAAGACACACTTCCAACGAGCTATATGTTGATATTATTGA
GTCACTTTCCGTGACGATGGCGCCATCAGGACGACTGCTCTCTGCAATGT
CTTCCGGTACTATCGCCTTCACCGCCAAAATATCCGGTGTACCCGATCTG
CTTCTTTCGTTAACAGCGCCCGGTGGTCAGAAAGCCTTGGGACGCAAGCT
GGAGCTGCCGGTATTTCACCCATGTGTGCGCTTGGCGCGCTGGCGGGAGC
ACCCTGGCGAGCTCAGTTTTGTACCACCAGACGGTCGGTTCATTCTTGCC
GGATACGAGGTGGACCTCATGCCAACAGACCCTACACTTGATCAACCCCC
GAGTCATATGGAGAAGCTTTTCTTGCCGGCTATTGTGGACATCCGTAAAT
CGCTTGGGCCGACTGGCTCAGACTTCGAGGTCCGCCTTATTCTCAACACA
AACTTCCCGGGATACTCATCCTCTAACCGACCTGGGGTCGGGCGTAGCGG
ATCAGGCACGTCTACACCCTCTTTCCTCGGGGGTGGAGGCGGCAACTCCT
CGGCGCCAGTGCTAGAAGAGGTTGTGGTGAGCGTCCCGATCCCGAAGTCG
GTCCGGAACATCACAGACATGCAAGCCAGCCGAGGAGAGGCTTTATTCTC
ACCGGGCAACGGCGTATTAGAATGGCGCGTGCCGACTAAAGATGCCGGCA
CAATCTCCGGAACGGCGACACTCCGGTGCACCGTCGTAGGACACTACGCG
GATGACGAGCTGGACGACGACGTCGAAGAACTCGACGCAGACACCAACCT
CCTGCAGGGCTACTACGACGCCAGCGCGTCTTACCAGAACCCTGAAGCAG
ACACGACGAAACGCAAGACTAAGAAAAAGAAGAAGAAGAAGGTTGTCAAG
AAATCTTCTTCCCGCGCAGCGGCAGCGGCAGCGGCAGCAGAAGCAGAAGC
CTCAGCTTCCTCGCCCGCTGAACACCTTTCCTTGAACCCCGAGGATCCCG
AACAACTCGAACATACGCCTACTCCTGAACCCGAACAATCCCAGACGCTA
ACACCCCCCGTTCAATCATCTTCGCCGCAACCTCCACCGTCACTTCCCCG
GTCACAGTCACAGTCGCAGAAACAATCACCCAGCCGAGCTTACTCTGATT
CCTCCATCTTCCTTTCGGCGCCCCGTAAAACCAAGACCCAACTAAACGCG
ACACTTATGCCTAATTCGGCGGCTGTGTCGTTCTCTGTCCGTGGCTGGCT
TCCCTCGGGGCTCAAGGTAGAGAGCCTGAACATCGATCCGCGGCGGAGTC
GCGGACTAGGCGAGGGAGTGAAACCATATAAGGGAGTGAAATATATCTGT
ATGAGTCGGAAGGGAGTGGAGCGGAGATGCTAGATGACCACCTCTGCCTA
CTACGTTACGCCCCCACCGGTCGGGATAGGTTGCCTTCGCCATCATGAGC
GGCCAGTCACTGACCTGTCCTCTTCCAGCAATCCGATCGTCGAGCAGGTC
TATCGCTCCCGTCCGCCCTCCGCATCGGCCATTCTTCCCCTCTATAATGC
CTATGCAGCTCCGCGCCCATCACTCATCTACTTTCCAAATACAACTCCGC
CGGTGACAGTGTTTTCGGTAGTGCAGTCCAACCTACTGTTTTTGGCGCTG
TCCGAGGTTGACACGGAACCGCTGCTTGCCCTGGAATTCATTCATCGGGT
TGTTGATGTTCTCGAGGACTTCGTCGGGGCACCTTTGCTTTCCACCAAGA
TCCAGGCGAATTATGATGTGGTTGCACAGCTTCTGCACGAAATGTGCGAT
GCGGGGATTGTCTGCAATACAGAGCCCAATGCGCTACAGGAGGTAGTGGA
AATGCCGGGGTGGATGGGGAAGCTGTTAGGCGGCGTTGGATTGCCTGGGT
CATCCACACCGATTCTGGGACAACCCAGTGCCATGAAGCAATCAGCCGCC
GCCGCGACCCAAGGACCTGCGATCCCCTGGAGAAAGTCCGGAGTAAGACA
CACTTCCAACGAGCTATATGTTGATATTATTGAGTCACTTTCCGTGACGA
TGGCGCCATCAGGACGACTGCTCTCTGCAATGTCTTCCGGTACTATCGCC
TTCACCGCCAAAATATCCGGTGTACCCGATCTGCTTCTTTCGTTAACAGC
GCCCGGTGGTCAGAAAGCCTTGGGACGCAAGCTGGAGCTGCCGGTATTTC
ACCCATGTGTGCGCTTGGCGCGCTGGCGGGAGCACCCTGGCGAGCTCAGT
TTTGTACCACCAGACGGTCGGTTCATTCTTGCCGGATACGAGGTGGACCT
CATGCCAACAGACCCTACACTTGATCAACCCCCGAGTCATATGGAGAAGC
TTTTCTTGCCGGCTATTGTGGACATCCGTAAATCGCTTGGGCCGACTGGC
TCAGACTTCGAGGTCCGCCTTATTCTCAACACAAACTTCCCGGGATACTC
ATCCTCTAACCGACCTGGGGTCGGGCGTAGCGGATCAGGCACGTCTACAC
CCTCTTTCCTCGGGGGTGGAGGCGGCAACTCCTCGGCGCCAGTGCTAGAA
GAGGTTGTGGTGAGCGTCCCGATCCCGAAGTCGGTCCGGAACATCACAGA
CATGCAAGCCAGCCGAGGAGAGGCTTTATTCTCACCGGGCAACGGCGTAT
TAGAATGGCGCGTGCCGACTAAAGATGCCGGCACAATCTCCGGAACGGCG
ACACTCCGGTGCACCGTCGTAGGACACTACGCGGATGACGAGCTGGACGA
CGACGTCGAAGAACTCGACGCAGACACCAACCTCCTGCAGGGCTACTACG
ACGCCAGCGCGTCTTACCAGAACCCTGAAGCAGACACGACGAAACGCAAG
ACTAAGAAAAAGAAGAAGAAGAAGGTTGTCAAGAAATCTTCTTCCCGCGC
AGCGGCAGCGGCAGCGGCAGCAGAAGCAGAAGCCTCAGCTTCCTCGCCCG
CTGAACACCTTTCCTTGAACCCCGAGGATCCCGAACAACTCGAACATACG
CCTACTCCTGAACCCGAACAATCCCAGACGCTAACACCCCCCGTTCAATC
ATCTTCGCCGCAACCTCCACCGTCACTTCCCCGGTCACAGTCACAGTCGC
AGAAACAATCACCCAGCCGAGCTTACTCTGATTCCTCCATCTTCCTTTCG
GCGCCCCGTAAAACCAAGACCCAACTAAACGCGACACTTATGCCTAATTC
GGCGGCTGTGTCGTTCTCTGTCCGTGGCTGGCTTCCCTCGGGGCTCAAGG
TAGAGAGCCTGAACATCGATCCGCGGCGGAGTCGCGGACTAGGCGAGGGA
GTGAAACCATATAAGGGAGTGAAATATATCTGTATGAGTCGGAAGGGAGT
GGAGCGGAGATGCTAGATGACCACCTCTGCCTACTACGTTACGCCCCCAC
CGGTCGGGATAGGTTGCCTTCGCCATCATGAGCGGCCAGTCACTGACCTG
TCCTCTTCCAGCAATCCGATCGTCGAGCAGGTCTATCGCTCCCGTCCGCC
CTCCGCATCGGCCATTCTTCCCCTCTATAATGCCTATGCAGCTCCGCGCC
CATCACTCATCTACTTTCCAAATACAACTCCGCCGGTGACAGTGTTTTCG
GTAGTGCAGTCCAACCTACTGTTTTTGGCGCTGTCCGAGGTTGACACGGA
ACCGCTGCTTGCCCTGGAATTCATTCATCGGGTTGTTGATGTTCTCGAGG
ACTTCGTCGGGGCACCTTTGCTTTCCACCAAGATCCAGGCGAATTATGAT
GTGGTTGCACAGCTTCTGCACGAAATGTGCGATGCGGGGATTGTCTGCAA
TACAGAGCCCAATGCGCTACAGGAGGTAGTGGAAATGCCGGGGTGGATGG
GGAAGCTGTTAGGCGGCGTTGGATTGCCTGGGTCATCCACACCGATTCTG
GGACAACCCAGTGCCATGAAGCAATCAGCCGCCGCCGCGACCCAAGGACC
TGCGATCCCCTGGAGAAAGTCCGGAGTAAGACACACTTCCAACGAGCTAT
ATGTTGATATTATTGAGTCACTTTCCGTGACGATGGCGCCATCAGGACGA
CTGCTCTCTGCAATGTCTTCCGGTACTATCGCCTTCACCGCCAAAATATC
CGGTGTACCCGATCTGCTTCTTTCGTTAACAGCGCCCGGTGGTCAGAAAG
CCTTGGGACGCAAGCTGGAGCTGCCGGTATTTCACCCATGTGTGCGCTTG
GCGCGCTGGCGGGAGCACCCTGGCGAGCTCAGTTTTGTACCACCAGACGG
TCGGTTCATTCTTGCCGGATACGAGGTGGACCTCATGCCAACAGACCCTA
CACTTGATCAACCCCCGAGTCATATGGAGAAGCTTTTCTTGCCGGCTATT
GTGGACATCCGTAAATCGCTTGGGCCGACTGGCTCAGACTTCGAGGTCCG
CCTTATTCTCAACACAAACTTCCCGGGATACTCATCCTCTAACCGACCTG
GGGTCGGGCGTAGCGGATCAGGCACGTCTACACCCTCTTTCCTCGGGGGT
GGAGGCGGCAACTCCTCGGCGCCAGTGCTAGAAGAGGTTGTGGTGAGCGT
CCCGATCCCGAAGTCGGTCCGGAACATCACAGACATGCAAGCCAGCCGAG
GAGAGGCTTTATTCTCACCGGGCAACGGCGTATTAGAATGGCGCGTGCCG
ACTAAAGATGCCGGCACAATCTCCGGAACGGCGACACTCCGGTGCACCGT
CGTAGGACACTACGCGGATGACGAGCTGGACGACGACGTCGAAGAACTCG
ACGCAGACACCAACCTCCTGCAGGGCTACTACGACGCCAGCGCGTCTTAC
CAGAACCCTGAAGCAGACACGACGAAACGCAAGACTAAGAAAAAGAAGAA
GAAGAAGGTTGTCAAGAAATCTTCTTCCCGCGCAGCGGCAGCGGCAGCGG
CAGCAGAAGCAGAAGCCTCAGCTTCCTCGCCCGCTGAACACCTTTCCTTG
AACCCCGAGGATCCCGAACAACTCGAACATACGCCTACTCCTGAACCCGA
ACAATCCCAGACGCTAACACCCCCCGTTCAATCATCTTCGCCGCAACCTC
CACCGTCACTTCCCCGGTCACAGTCACAGTCGCAGAAACAATCACCCAGC
CGAGCTTACTCTGATTCCTCCATCTTCCTTTCGGCGCCCCGTAAAACCAA
GACCCAACTAAACGCGACACTTATGCCTAATTCGGCGGCTGTGTCGTTCT
CTGTCCGTGGCTGGCTTCCCTCGGGGCTCAAGGTAGAGAGCCTGAACATC
GATCCGCGGCGGAGTCGCGGACTAGGCGAGGGAGTGAAACCATATAAGGG
AGTGAAATATATCTGTATGAGTCGGAAGGGAGTGGAGCGGAGATGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030131 | clathrin adaptor complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006886 | intracellular protein transport |
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR036168 |
| DBxref | InterPro:IPR018240 |
| DBxref | InterPro:IPR028565 |
| DBxref | PFAM:PF00928 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2202161..2204284 + |
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