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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2209520..2210442- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000746-T1 ID=CBS51388_000746-T1|Name=CBS51388_000746-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=923bp|location=Sequence derived from alignment at An01:2209520..2210442- (Aspergillus niger CBS 513.88)
ATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATAC
TTCTCCTACAGAGAATAACTCAAGGTATGCATTAGATATCCCTAATCAGT
TAGGAACTGCCCTTATAAAGTGACATTGACTCATTCCCACCACCCACAAA
CAGACCAACAGACCATCCCACACCATCAAGACAACCTCATCAACACTCAA
CACCAACAAAATCACCACCCCACAACCGCCACCGTCTACACGAATTGTAC
GAACAATTCCCCCCAAGCAAACCTCCTCCATCAATACGACCCCCTAACCC
ACACACCTCCAGCTTCATCGGCAAAACCGGCGGCCAAATCTTCCACGAAA
TGATGCGCCTCCACAACGTCAAACACATCTGTAAGCCTGTCTCTCCCCTT
CCCTCTTTCCAACTATACACCCTCCCAACTAACCACCACCACCACCATCT
CCCTCCCTTTAGTCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGAC
GCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCCCAAACACGAGCA
ATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCAT
ATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAAT
CTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTGC
TTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAGG
AGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGGC
GTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGGT
GGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGATG
TGGGGGCGGGGGTTTATTCTTGA back to topCoding sequence (CDS) from alignment at An01:2209520..2210442- >CBS51388_000746-T1 ID=CBS51388_000746-T1|Name=CBS51388_000746-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2286bp|location=Sequence derived from alignment at An01:2209520..2210442- (Aspergillus niger CBS 513.88)
TCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGACGCGCTCTACGCC
TCCCCGCATCTAACATTCATCCTCCCCAAACACGAGCAATCAGCCGGCCA
CATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCATATCCCACCCCCG
GCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAATCTCATCACGCCG
CTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTGCTTTCTGTGGACA
GGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAGGAGGCGGATGTGT
TGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGGCGTTAAGCATGTG
AGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGGTGGCGTTGAGTGG
GAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGATGTGGGGGCGGGGG
TTTATTCTTGAACCAACAGACCATCCCACACCATCAAGACAACCTCATCA
ACACTCAACACCAACAAAATCACCACCCCACAACCGCCACCGTCTACACG
AATTGTACGAACAATTCCCCCCAAGCAAACCTCCTCCATCAATACGACCC
CCTAACCCACACACCTCCAGCTTCATCGGCAAAACCGGCGGCCAAATCTT
CCACGAAATGATGCGCCTCCACAACGTCAAACACATCTATGGGGATGGCA
CTCAGCTCGAAGATTCAAACGATTGATGATGAGAATACTTCTCCTACAGA
GAATAACTCAAGTCGGCTACCCAGGCGGCACCATCCTCCCCATCCTGGAC
GCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCCCAAACACGAGCA
ATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCTCGATCTCCTCAT
ATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCCGGCGCAACGAAT
CTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCACCCCGCTCATTGC
TTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGGACGGGTTCCAGG
AGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAGTGGAATGTGGGC
GTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGAGGCGTTTTGGGT
GGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGGTGCCCAAGGATG
TGGGGGCGGGGGTTTATTCTTGAACCAACAGACCATCCCACACCATCAAG
ACAACCTCATCAACACTCAACACCAACAAAATCACCACCCCACAACCGCC
ACCGTCTACACGAATTGTACGAACAATTCCCCCCAAGCAAACCTCCTCCA
TCAATACGACCCCCTAACCCACACACCTCCAGCTTCATCGGCAAAACCGG
CGGCCAAATCTTCCACGAAATGATGCGCCTCCACAACGTCAAACACATCT
ATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGATGATGAGAATAC
TTCTCCTACAGAGAATAACTCAAGTCGGCTACCCAGGCGGCACCATCCTC
CCCATCCTGGACGCGCTCTACGCCTCCCCGCATCTAACATTCATCCTCCC
CAAACACGAGCAATCAGCCGGCCACATGGCCGAAGGCTACGCGCGCGCCT
CGATCTCCTCATATCCCACCCCCGGCATCGTCCTCGTAACCTCCGGCCCC
GGCGCAACGAATCTCATCACGCCGCTGCAGAACGCCCTCAGCGACGGCAC
CCCGCTCATTGCTTTCTGTGGACAGGTGGCGACGAGCGCCATCGGGAAGG
ACGGGTTCCAGGAGGCGGATGTGTTGGGGATGACGAGATTTTGTACGAAG
TGGAATGTGGGCGTTAAGCATGTGAGGGAGTTGCCGCAGAGGATTGAGGA
GGCGTTTTGGGTGGCGTTGAGTGGGAGGATGGGGCCTGTGGTCGTGGAGG
TGCCCAAGGATGTGGGGGCGGGGGTTTATTCTTGAACCAACAGACCATCC
CACACCATCAAGACAACCTCATCAACACTCAACACCAACAAAATCACCAC
CCCACAACCGCCACCGTCTACACGAATTGTACGAACAATTCCCCCCAAGC
AAACCTCCTCCATCAATACGACCCCCTAACCCACACACCTCCAGCTTCAT
CGGCAAAACCGGCGGCCAAATCTTCCACGAAATGATGCGCCTCCACAACG
TCAAACACATCTATGGGGATGGCACTCAGCTCGAAGATTCAAACGATTGA
TGATGAGAATACTTCTCCTACAGAGAATAACTCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030976 | thiamine pyrophosphate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR012001 |
| DBxref | PFAM:PF02776 |
| Product | threonine deaminase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2209520..2210442 - |
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