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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2214708..2216557- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000748-T1 ID=CBS51388_000748-T1|Name=CBS51388_000748-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1850bp|location=Sequence derived from alignment at An01:2214708..2216557- (Aspergillus niger CBS 513.88)
ATGGCTTCCTTTGAAGAAGAAGACCGGAAGTATCTGGACGATGTCCAGGC
CGTCCAGAAGTGGTGGCAGGACTCCAGATGGAGACACACCAAGCGCCCCT
TTACTGCTGAGCAGATTGTGGCTAAGCGCGGCACCCTGAAGATCGAATAC
CCTTCCAATGCTATGAGCAAGAAGCTGTGGAAGATCTTGGAGAGCAATTT
CGAGGTTCGCATGTCCCTGCTCTGTGGTGGTTGACATATTTCCTAAACTT
ATCTGTCTTCTATTAGAAAAAAGTACCTAGCTTCACCTATGGCTGTCTCG
AGCCCACAATGCTCACCCAGATGGCCAAATACCTTGACACCGTCTACGTC
TCTGGCTGGCAGAGCTCCTCCACCGCCTCGTCCACCGACGAACCCTCTCC
CGACCTTGCCGACTACCCCATGGTAGGTCTCAAAAGGATGTTGTTGGTTG
TGGGATCACTGCTAAAACATGAGTTAGAATACCGTCCCCAACAAGGTCAA
CCAGCTGTTCCTGGCTCAGCTGTTCCATGACCGGAAACAGCGCGAAGAAC
GCATCACCACTCCCAAGGAGCAGCGTGGCAAGGTGGCAAATGTTGACTAC
CTCCGCCCCATCATTGCGGATGCCGATACCGGACATGGTGGCTTGACGGC
CGTGATGAAGCTGACCAAGCTGTTTATTGAGCGTGGTGCTGCTGGTATTC
ACATTGAAGACCAGGCTCCGGGAACCAAGAAGTGCGGCCACATGGCCGGA
AAGGTGCTTGTGCCTATCAGCGAACACATCAACCGTCTGGTGGCTATCCG
TGCGCAAGCGGATATCATGGGTATGTAGCATCCTCATTCGCTTAATATGC
ATGGCATCAACTGACTCTATTCAGGCACCGATCTGCTTGCCATCGCTCGA
ACCGACTCCGAAGCCGCCACTCTCATTACCTCCACAATTGATTACCGCGA
TCATGCCTTCGTCGTGGGCTCAACAAACCCCAACCTGCAGCCCCTCAACG
ACCTCATGGTGGCCGCAGAGCAGGCTGGCAAGAACGGAAACGAGCTGCAA
GCCATCGAAGACCAGTGGGTTGCTCAGGCTGGCCTGAAGCTTTTCAGCGA
GGCTGTCATCGATACCATCAACAAGAGCTCCTCTGGTAACAAGAAGGCCC
TCATCGATGAGTACCTGAAGAAGGCCAAGGGGAAGAGCAACCGCGAAGCC
CGGGCTATTGCCAAGGACATCACTGGCGTCGACATCTACTGGGACTGGGA
CGCCCCTCGCACCCGGGAGGGCTTCTACCGGTACCAGGGAGGTACGCAGT
GTGCGGTGAACCGCGCCATTGCGTATGGCCCATTCGCAGATCTCATCTGG
ATGGAGAGCAAGCTGCCCGACTATGCCCAGGCGAAGGAGTTTGCCGACGG
TGTTCACGCCGTGTGGCCCGAGCAGAAGTAAGTGTTGTCCTGATTTGCAT
TGCATCAGCGGAGACTTCGATACTAACCTGACCCTTTAGGCTGGCGTACA
ACCTGTCGCCCTCATTCAACTGGAAGAAGGCGATGCCGCGCGATGAGCAG
GAGACCTACATCCAGCGCCTGGGAGCCCTGGGATACTGCTGGCAGTTCAT
CACCCTGGCGGGTCTGCACACGACGGCGCTGATCACGGATCAGTTTGCCA
AGGCGTACGCGAAGCAGGGCATGCGGGCGTACGGCGAGTTGGTGCAAGAA
CCCGAGATGGAGCAGGGGGTGGATGTGGTGACTCACCAGAAATGGAGTGG
TGCCAACTACGTGGATAATATGTTGAAGATGGTGACGGGCGGCATCAGCA
GTACGGCCGCCATGGGCAAGGGCGTCACGGAGGATCAGTTCAAGCACTGA
back to topCoding sequence (CDS) from alignment at An01:2214708..2216557- >CBS51388_000748-T1 ID=CBS51388_000748-T1|Name=CBS51388_000748-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8085bp|location=Sequence derived from alignment at An01:2214708..2216557- (Aspergillus niger CBS 513.88)
GCTGGCGTACAACCTGTCGCCCTCATTCAACTGGAAGAAGGCGATGCCGC
GCGATGAGCAGGAGACCTACATCCAGCGCCTGGGAGCCCTGGGATACTGC
TGGCAGTTCATCACCCTGGCGGGTCTGCACACGACGGCGCTGATCACGGA
TCAGTTTGCCAAGGCGTACGCGAAGCAGGGCATGCGGGCGTACGGCGAGT
TGGTGCAAGAACCCGAGATGGAGCAGGGGGTGGATGTGGTGACTCACCAG
AAATGGAGTGGTGCCAACTACGTGGATAATATGTTGAAGATGGTGACGGG
CGGCATCAGCAGTACGGCCGCCATGGGCAAGGGCGTCACGGAGGATCAGT
TCAAGCACTGAGCACCGATCTGCTTGCCATCGCTCGAACCGACTCCGAAG
CCGCCACTCTCATTACCTCCACAATTGATTACCGCGATCATGCCTTCGTC
GTGGGCTCAACAAACCCCAACCTGCAGCCCCTCAACGACCTCATGGTGGC
CGCAGAGCAGGCTGGCAAGAACGGAAACGAGCTGCAAGCCATCGAAGACC
AGTGGGTTGCTCAGGCTGGCCTGAAGCTTTTCAGCGAGGCTGTCATCGAT
ACCATCAACAAGAGCTCCTCTGGTAACAAGAAGGCCCTCATCGATGAGTA
CCTGAAGAAGGCCAAGGGGAAGAGCAACCGCGAAGCCCGGGCTATTGCCA
AGGACATCACTGGCGTCGACATCTACTGGGACTGGGACGCCCCTCGCACC
CGGGAGGGCTTCTACCGGTACCAGGGAGGTACGCAGTGTGCGGTGAACCG
CGCCATTGCGTATGGCCCATTCGCAGATCTCATCTGGATGGAGAGCAAGC
TGCCCGACTATGCCCAGGCGAAGGAGTTTGCCGACGGTGTTCACGCCGTG
TGGCCCGAGCAGAAAATACCGTCCCCAACAAGGTCAACCAGCTGTTCCTG
GCTCAGCTGTTCCATGACCGGAAACAGCGCGAAGAACGCATCACCACTCC
CAAGGAGCAGCGTGGCAAGGTGGCAAATGTTGACTACCTCCGCCCCATCA
TTGCGGATGCCGATACCGGACATGGTGGCTTGACGGCCGTGATGAAGCTG
ACCAAGCTGTTTATTGAGCGTGGTGCTGCTGGTATTCACATTGAAGACCA
GGCTCCGGGAACCAAGAAGTGCGGCCACATGGCCGGAAAGGTGCTTGTGC
CTATCAGCGAACACATCAACCGTCTGGTGGCTATCCGTGCGCAAGCGGAT
ATCATGGAAAAAAGTACCTAGCTTCACCTATGGCTGTCTCGAGCCCACAA
TGCTCACCCAGATGGCCAAATACCTTGACACCGTCTACGTCTCTGGCTGG
CAGAGCTCCTCCACCGCCTCGTCCACCGACGAACCCTCTCCCGACCTTGC
CGACTACCCCATGATGGCTTCCTTTGAAGAAGAAGACCGGAAGTATCTGG
ACGATGTCCAGGCCGTCCAGAAGTGGTGGCAGGACTCCAGATGGAGACAC
ACCAAGCGCCCCTTTACTGCTGAGCAGATTGTGGCTAAGCGCGGCACCCT
GAAGATCGAATACCCTTCCAATGCTATGAGCAAGAAGCTGTGGAAGATCT
TGGAGAGCAATTTCGAGGCTGGCGTACAACCTGTCGCCCTCATTCAACTG
GAAGAAGGCGATGCCGCGCGATGAGCAGGAGACCTACATCCAGCGCCTGG
GAGCCCTGGGATACTGCTGGCAGTTCATCACCCTGGCGGGTCTGCACACG
ACGGCGCTGATCACGGATCAGTTTGCCAAGGCGTACGCGAAGCAGGGCAT
GCGGGCGTACGGCGAGTTGGTGCAAGAACCCGAGATGGAGCAGGGGGTGG
ATGTGGTGACTCACCAGAAATGGAGTGGTGCCAACTACGTGGATAATATG
TTGAAGATGGTGACGGGCGGCATCAGCAGTACGGCCGCCATGGGCAAGGG
CGTCACGGAGGATCAGTTCAAGCACTGAGCACCGATCTGCTTGCCATCGC
TCGAACCGACTCCGAAGCCGCCACTCTCATTACCTCCACAATTGATTACC
GCGATCATGCCTTCGTCGTGGGCTCAACAAACCCCAACCTGCAGCCCCTC
AACGACCTCATGGTGGCCGCAGAGCAGGCTGGCAAGAACGGAAACGAGCT
GCAAGCCATCGAAGACCAGTGGGTTGCTCAGGCTGGCCTGAAGCTTTTCA
GCGAGGCTGTCATCGATACCATCAACAAGAGCTCCTCTGGTAACAAGAAG
GCCCTCATCGATGAGTACCTGAAGAAGGCCAAGGGGAAGAGCAACCGCGA
AGCCCGGGCTATTGCCAAGGACATCACTGGCGTCGACATCTACTGGGACT
GGGACGCCCCTCGCACCCGGGAGGGCTTCTACCGGTACCAGGGAGGTACG
CAGTGTGCGGTGAACCGCGCCATTGCGTATGGCCCATTCGCAGATCTCAT
CTGGATGGAGAGCAAGCTGCCCGACTATGCCCAGGCGAAGGAGTTTGCCG
ACGGTGTTCACGCCGTGTGGCCCGAGCAGAAAATACCGTCCCCAACAAGG
TCAACCAGCTGTTCCTGGCTCAGCTGTTCCATGACCGGAAACAGCGCGAA
GAACGCATCACCACTCCCAAGGAGCAGCGTGGCAAGGTGGCAAATGTTGA
CTACCTCCGCCCCATCATTGCGGATGCCGATACCGGACATGGTGGCTTGA
CGGCCGTGATGAAGCTGACCAAGCTGTTTATTGAGCGTGGTGCTGCTGGT
ATTCACATTGAAGACCAGGCTCCGGGAACCAAGAAGTGCGGCCACATGGC
CGGAAAGGTGCTTGTGCCTATCAGCGAACACATCAACCGTCTGGTGGCTA
TCCGTGCGCAAGCGGATATCATGGAAAAAAGTACCTAGCTTCACCTATGG
CTGTCTCGAGCCCACAATGCTCACCCAGATGGCCAAATACCTTGACACCG
TCTACGTCTCTGGCTGGCAGAGCTCCTCCACCGCCTCGTCCACCGACGAA
CCCTCTCCCGACCTTGCCGACTACCCCATGATGGCTTCCTTTGAAGAAGA
AGACCGGAAGTATCTGGACGATGTCCAGGCCGTCCAGAAGTGGTGGCAGG
ACTCCAGATGGAGACACACCAAGCGCCCCTTTACTGCTGAGCAGATTGTG
GCTAAGCGCGGCACCCTGAAGATCGAATACCCTTCCAATGCTATGAGCAA
GAAGCTGTGGAAGATCTTGGAGAGCAATTTCGAGGCTGGCGTACAACCTG
TCGCCCTCATTCAACTGGAAGAAGGCGATGCCGCGCGATGAGCAGGAGAC
CTACATCCAGCGCCTGGGAGCCCTGGGATACTGCTGGCAGTTCATCACCC
TGGCGGGTCTGCACACGACGGCGCTGATCACGGATCAGTTTGCCAAGGCG
TACGCGAAGCAGGGCATGCGGGCGTACGGCGAGTTGGTGCAAGAACCCGA
GATGGAGCAGGGGGTGGATGTGGTGACTCACCAGAAATGGAGTGGTGCCA
ACTACGTGGATAATATGTTGAAGATGGTGACGGGCGGCATCAGCAGTACG
GCCGCCATGGGCAAGGGCGTCACGGAGGATCAGTTCAAGCACTGAGCACC
GATCTGCTTGCCATCGCTCGAACCGACTCCGAAGCCGCCACTCTCATTAC
CTCCACAATTGATTACCGCGATCATGCCTTCGTCGTGGGCTCAACAAACC
CCAACCTGCAGCCCCTCAACGACCTCATGGTGGCCGCAGAGCAGGCTGGC
AAGAACGGAAACGAGCTGCAAGCCATCGAAGACCAGTGGGTTGCTCAGGC
TGGCCTGAAGCTTTTCAGCGAGGCTGTCATCGATACCATCAACAAGAGCT
CCTCTGGTAACAAGAAGGCCCTCATCGATGAGTACCTGAAGAAGGCCAAG
GGGAAGAGCAACCGCGAAGCCCGGGCTATTGCCAAGGACATCACTGGCGT
CGACATCTACTGGGACTGGGACGCCCCTCGCACCCGGGAGGGCTTCTACC
GGTACCAGGGAGGTACGCAGTGTGCGGTGAACCGCGCCATTGCGTATGGC
CCATTCGCAGATCTCATCTGGATGGAGAGCAAGCTGCCCGACTATGCCCA
GGCGAAGGAGTTTGCCGACGGTGTTCACGCCGTGTGGCCCGAGCAGAAAA
TACCGTCCCCAACAAGGTCAACCAGCTGTTCCTGGCTCAGCTGTTCCATG
ACCGGAAACAGCGCGAAGAACGCATCACCACTCCCAAGGAGCAGCGTGGC
AAGGTGGCAAATGTTGACTACCTCCGCCCCATCATTGCGGATGCCGATAC
CGGACATGGTGGCTTGACGGCCGTGATGAAGCTGACCAAGCTGTTTATTG
AGCGTGGTGCTGCTGGTATTCACATTGAAGACCAGGCTCCGGGAACCAAG
AAGTGCGGCCACATGGCCGGAAAGGTGCTTGTGCCTATCAGCGAACACAT
CAACCGTCTGGTGGCTATCCGTGCGCAAGCGGATATCATGGAAAAAAGTA
CCTAGCTTCACCTATGGCTGTCTCGAGCCCACAATGCTCACCCAGATGGC
CAAATACCTTGACACCGTCTACGTCTCTGGCTGGCAGAGCTCCTCCACCG
CCTCGTCCACCGACGAACCCTCTCCCGACCTTGCCGACTACCCCATGATG
GCTTCCTTTGAAGAAGAAGACCGGAAGTATCTGGACGATGTCCAGGCCGT
CCAGAAGTGGTGGCAGGACTCCAGATGGAGACACACCAAGCGCCCCTTTA
CTGCTGAGCAGATTGTGGCTAAGCGCGGCACCCTGAAGATCGAATACCCT
TCCAATGCTATGAGCAAGAAGCTGTGGAAGATCTTGGAGAGCAATTTCGA
GGCTGGCGTACAACCTGTCGCCCTCATTCAACTGGAAGAAGGCGATGCCG
CGCGATGAGCAGGAGACCTACATCCAGCGCCTGGGAGCCCTGGGATACTG
CTGGCAGTTCATCACCCTGGCGGGTCTGCACACGACGGCGCTGATCACGG
ATCAGTTTGCCAAGGCGTACGCGAAGCAGGGCATGCGGGCGTACGGCGAG
TTGGTGCAAGAACCCGAGATGGAGCAGGGGGTGGATGTGGTGACTCACCA
GAAATGGAGTGGTGCCAACTACGTGGATAATATGTTGAAGATGGTGACGG
GCGGCATCAGCAGTACGGCCGCCATGGGCAAGGGCGTCACGGAGGATCAG
TTCAAGCACTGAGCACCGATCTGCTTGCCATCGCTCGAACCGACTCCGAA
GCCGCCACTCTCATTACCTCCACAATTGATTACCGCGATCATGCCTTCGT
CGTGGGCTCAACAAACCCCAACCTGCAGCCCCTCAACGACCTCATGGTGG
CCGCAGAGCAGGCTGGCAAGAACGGAAACGAGCTGCAAGCCATCGAAGAC
CAGTGGGTTGCTCAGGCTGGCCTGAAGCTTTTCAGCGAGGCTGTCATCGA
TACCATCAACAAGAGCTCCTCTGGTAACAAGAAGGCCCTCATCGATGAGT
ACCTGAAGAAGGCCAAGGGGAAGAGCAACCGCGAAGCCCGGGCTATTGCC
AAGGACATCACTGGCGTCGACATCTACTGGGACTGGGACGCCCCTCGCAC
CCGGGAGGGCTTCTACCGGTACCAGGGAGGTACGCAGTGTGCGGTGAACC
GCGCCATTGCGTATGGCCCATTCGCAGATCTCATCTGGATGGAGAGCAAG
CTGCCCGACTATGCCCAGGCGAAGGAGTTTGCCGACGGTGTTCACGCCGT
GTGGCCCGAGCAGAAAATACCGTCCCCAACAAGGTCAACCAGCTGTTCCT
GGCTCAGCTGTTCCATGACCGGAAACAGCGCGAAGAACGCATCACCACTC
CCAAGGAGCAGCGTGGCAAGGTGGCAAATGTTGACTACCTCCGCCCCATC
ATTGCGGATGCCGATACCGGACATGGTGGCTTGACGGCCGTGATGAAGCT
GACCAAGCTGTTTATTGAGCGTGGTGCTGCTGGTATTCACATTGAAGACC
AGGCTCCGGGAACCAAGAAGTGCGGCCACATGGCCGGAAAGGTGCTTGTG
CCTATCAGCGAACACATCAACCGTCTGGTGGCTATCCGTGCGCAAGCGGA
TATCATGGAAAAAAGTACCTAGCTTCACCTATGGCTGTCTCGAGCCCACA
ATGCTCACCCAGATGGCCAAATACCTTGACACCGTCTACGTCTCTGGCTG
GCAGAGCTCCTCCACCGCCTCGTCCACCGACGAACCCTCTCCCGACCTTG
CCGACTACCCCATGATGGCTTCCTTTGAAGAAGAAGACCGGAAGTATCTG
GACGATGTCCAGGCCGTCCAGAAGTGGTGGCAGGACTCCAGATGGAGACA
CACCAAGCGCCCCTTTACTGCTGAGCAGATTGTGGCTAAGCGCGGCACCC
TGAAGATCGAATACCCTTCCAATGCTATGAGCAAGAAGCTGTGGAAGATC
TTGGAGAGCAATTTCGAGGCTGGCGTACAACCTGTCGCCCTCATTCAACT
GGAAGAAGGCGATGCCGCGCGATGAGCAGGAGACCTACATCCAGCGCCTG
GGAGCCCTGGGATACTGCTGGCAGTTCATCACCCTGGCGGGTCTGCACAC
GACGGCGCTGATCACGGATCAGTTTGCCAAGGCGTACGCGAAGCAGGGCA
TGCGGGCGTACGGCGAGTTGGTGCAAGAACCCGAGATGGAGCAGGGGGTG
GATGTGGTGACTCACCAGAAATGGAGTGGTGCCAACTACGTGGATAATAT
GTTGAAGATGGTGACGGGCGGCATCAGCAGTACGGCCGCCATGGGCAAGG
GCGTCACGGAGGATCAGTTCAAGCACTGAGCACCGATCTGCTTGCCATCG
CTCGAACCGACTCCGAAGCCGCCACTCTCATTACCTCCACAATTGATTAC
CGCGATCATGCCTTCGTCGTGGGCTCAACAAACCCCAACCTGCAGCCCCT
CAACGACCTCATGGTGGCCGCAGAGCAGGCTGGCAAGAACGGAAACGAGC
TGCAAGCCATCGAAGACCAGTGGGTTGCTCAGGCTGGCCTGAAGCTTTTC
AGCGAGGCTGTCATCGATACCATCAACAAGAGCTCCTCTGGTAACAAGAA
GGCCCTCATCGATGAGTACCTGAAGAAGGCCAAGGGGAAGAGCAACCGCG
AAGCCCGGGCTATTGCCAAGGACATCACTGGCGTCGACATCTACTGGGAC
TGGGACGCCCCTCGCACCCGGGAGGGCTTCTACCGGTACCAGGGAGGTAC
GCAGTGTGCGGTGAACCGCGCCATTGCGTATGGCCCATTCGCAGATCTCA
TCTGGATGGAGAGCAAGCTGCCCGACTATGCCCAGGCGAAGGAGTTTGCC
GACGGTGTTCACGCCGTGTGGCCCGAGCAGAAAATACCGTCCCCAACAAG
GTCAACCAGCTGTTCCTGGCTCAGCTGTTCCATGACCGGAAACAGCGCGA
AGAACGCATCACCACTCCCAAGGAGCAGCGTGGCAAGGTGGCAAATGTTG
ACTACCTCCGCCCCATCATTGCGGATGCCGATACCGGACATGGTGGCTTG
ACGGCCGTGATGAAGCTGACCAAGCTGTTTATTGAGCGTGGTGCTGCTGG
TATTCACATTGAAGACCAGGCTCCGGGAACCAAGAAGTGCGGCCACATGG
CCGGAAAGGTGCTTGTGCCTATCAGCGAACACATCAACCGTCTGGTGGCT
ATCCGTGCGCAAGCGGATATCATGGAAAAAAGTACCTAGCTTCACCTATG
GCTGTCTCGAGCCCACAATGCTCACCCAGATGGCCAAATACCTTGACACC
GTCTACGTCTCTGGCTGGCAGAGCTCCTCCACCGCCTCGTCCACCGACGA
ACCCTCTCCCGACCTTGCCGACTACCCCATGATGGCTTCCTTTGAAGAAG
AAGACCGGAAGTATCTGGACGATGTCCAGGCCGTCCAGAAGTGGTGGCAG
GACTCCAGATGGAGACACACCAAGCGCCCCTTTACTGCTGAGCAGATTGT
GGCTAAGCGCGGCACCCTGAAGATCGAATACCCTTCCAATGCTATGAGCA
AGAAGCTGTGGAAGATCTTGGAGAGCAATTTCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004451 | isocitrate lyase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019752 | carboxylic acid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015813 |
| DBxref | InterPro:IPR018523 |
| DBxref | InterPro:IPR040442 |
| DBxref | InterPro:IPR006254 |
| DBxref | PFAM:PF13714 |
| DBxref | PFAM:PF00463 |
| Product | isocitrate lyase 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2214708..2216557 - |
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