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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2300107..2300823+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000774-T1 ID=CBS51388_000774-T1|Name=CBS51388_000774-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=717bp|location=Sequence derived from alignment at An01:2300107..2300823+ (Aspergillus niger CBS 513.88)
ATGTCCTTCGGAACCATCTACACCTACCCCAACAACCCCCGGGTCATGAA
GGTACTCACCACCCCTCCCTTCACTCATCACCACCAATTAACCAACCCCT
AAACATAGACCCAAGCGGCTGCCAACTTCAACAACCTCACCCTGACCGTT
GCGGACTTCAAAATGGGCGAAACCAACCGCGACCCTGTCTTCCTCAGCAA
ATTCCCCTTGGGCAAGGTCCCCGCCTTCGAAGGCGCCGACGGCACTTGCC
TCGTCGAATCCGACGCCATCACACAATATGTGGCCGAGAGCGGTCCCGCG
GCAGGTCAATTGGTCGGCAGCACTCCCGCTGAACGTGCTCTGATCCGTCA
ATGGATCTGCTTTGCGGACGGGGAGGTGCTGGGCGCGGTGACTTCGATGG
TGCTGTGGCGGATCGGGTACAAGGCGTACGATGAGGCGACAGAGAAGAGT
GGACTGGAGAAATTGACTCGCGCGCTGGGGGCCTTGGAGAACAGGCTTAA
GGAGAGGACGTGGGTGGCAACAGAGAAGTTGAGCTTGGCGGATATTAGTG
TTGCCGCGGCGCTGTATTGGGGGTTCTCGATGGCCATTGATGCGGAGATG
AGGAAGGAGTATCCTGGTGTGGTGGCTTGGTATGAGCGCGTTATTGAGAG
TGAGCATGTCAAGGAGGCATTTGGTCCTAAGGTCTTCGTGGAGAAGAGGA
AGGAGCCTGAGAACTAA back to topCoding sequence (CDS) from alignment at An01:2300107..2300823+ >CBS51388_000774-T1 ID=CBS51388_000774-T1|Name=CBS51388_000774-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1320bp|location=Sequence derived from alignment at An01:2300107..2300823+ (Aspergillus niger CBS 513.88)
ATGTCCTTCGGAACCATCTACACCTACCCCAACAACCCCCGGGTCATGAA
GACCCAAGCGGCTGCCAACTTCAACAACCTCACCCTGACCGTTGCGGACT
TCAAAATGGGCGAAACCAACCGCGACCCTGTCTTCCTCAGCAAATTCCCC
TTGGGCAAGGTCCCCGCCTTCGAAGGCGCCGACGGCACTTGCCTCGTCGA
ATCCGACGCCATCACACAATATGTGGCCGAGAGCGGTCCCGCGGCAGGTC
AATTGGTCGGCAGCACTCCCGCTGAACGTGCTCTGATCCGTCAATGGATC
TGCTTTGCGGACGGGGAGGTGCTGGGCGCGGTGACTTCGATGGTGCTGTG
GCGGATCGGGTACAAGGCGTACGATGAGGCGACAGAGAAGAGTGGACTGG
AGAAATTGACTCGCGCGCTGGGGGCCTTGGAGAACAGGCTTAAGGAGAGG
ACGTGGGTGGCAACAGAGAAGTTGAGCTTGGCGGATATTAGTGTTGCCGC
GGCGCTGTATTGGGGGTTCTCGATGGCCATTGATGCGGAGATGAGGAAGG
AGTATCCTGGTGTGGTGGCTTGGTATGAGCGCGTTATTGAGAGTGAGCAT
GTCAAGGAGGCATTTGGTCCTAAGGTCTTCGTGGAGAAGAGGAAGGAGCC
TGAGAACTAAATGTCCTTCGGAACCATCTACACCTACCCCAACAACCCCC
GGGTCATGAAGACCCAAGCGGCTGCCAACTTCAACAACCTCACCCTGACC
GTTGCGGACTTCAAAATGGGCGAAACCAACCGCGACCCTGTCTTCCTCAG
CAAATTCCCCTTGGGCAAGGTCCCCGCCTTCGAAGGCGCCGACGGCACTT
GCCTCGTCGAATCCGACGCCATCACACAATATGTGGCCGAGAGCGGTCCC
GCGGCAGGTCAATTGGTCGGCAGCACTCCCGCTGAACGTGCTCTGATCCG
TCAATGGATCTGCTTTGCGGACGGGGAGGTGCTGGGCGCGGTGACTTCGA
TGGTGCTGTGGCGGATCGGGTACAAGGCGTACGATGAGGCGACAGAGAAG
AGTGGACTGGAGAAATTGACTCGCGCGCTGGGGGCCTTGGAGAACAGGCT
TAAGGAGAGGACGTGGGTGGCAACAGAGAAGTTGAGCTTGGCGGATATTA
GTGTTGCCGCGGCGCTGTATTGGGGGTTCTCGATGGCCATTGATGCGGAG
ATGAGGAAGGAGTATCCTGGTGTGGTGGCTTGGTATGAGCGCGTTATTGA
GAGTGAGCATGTCAAGGAGGCATTTGGTCCTAAGGTCTTCGTGGAGAAGA
GGAAGGAGCCTGAGAACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR010987 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR004046 |
| DBxref | InterPro:IPR004045 |
| DBxref | InterPro:IPR036249 |
| DBxref | PFAM:PF13417 |
| DBxref | PFAM:PF02798 |
| DBxref | PFAM:PF14497 |
| DBxref | PFAM:PF13410 |
| DBxref | PFAM:PF00043 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2300107..2300823 + |
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