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CBS51388_000788-T1, CBS51388_000788-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000788-T1
Unique NameCBS51388_000788-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2342309..2343234-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000788-T1 ID=CBS51388_000788-T1|Name=CBS51388_000788-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=926bp|location=Sequence derived from alignment at An01:2342309..2343234- (Aspergillus niger CBS 513.88)
ATGACCGACCCCAACAAAGGCACCAAAATCACCCTCTACTGGTACCAATA
CCCCCTCCCATCCCATTTCCCCCTAAACACCTATACTAAAAAAATGTGAA
TAAAACAGGCTCTCCCAATCCCGCTCTCACCGCATCCTCTGGCTCCTCGA
AGCCCTGCACCTCAACTACGAGCTAAAGATCTACCACCGCGGACCCGACA
AGCTCGCGCCCCCGGAACTGAAAGAGATCCATCCGTTAGGAAAGTCGCCT
CTCCTGACTATCCAGCCCGCGAATGCCACTCCAGACCAGAAGCCCATTGT
GCTGGCTGAATCGGGTATTATCATCGAGTACCTGCTCGATCACTTCGGCT
CCAATGCAGAGAAACCTCTCCTCCCGCCCCGGTGGAAAGATACCCAAGAT
GGTGTAGTTGGCGGAGAAACAGAGGAATGGATGCGCTATCGGTACTTCAT
GCACTATGCTGAGGGCAGTCTCATGCCGTTTTTGGTCATGCAGTTGGTTA
TGGATAGTATGTTTCCCATGACCCATACCAGATCTATGTAATGTGTGTGT
GTGTGTGCTAATGATGATGACAGCGGTGAAAAACCCCCCTGGAATGCCCT
TCTTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGGCCAGGTCGAGAAGGCG
TTCCTGGCGCGAAACATCCAGTCGCACTTGGAGTTCCTGGAAGATCAGCT
GCGGAGTAGTCCTAATGGGGGTGCCTATCTCTGCGGGACGGAGTTGACGG
CCGCGGACATTATGATGAGTTTCCCGGTGATTGCTATGTCCGGGAGGTTG
GAGGAGCAGTTGGACAAGTTTCCGCTGCTGAAGGGGTATGCGGATAGATT
GGAGAAGGAGGAGGGATATATTAGGGCTGTGAAGAAGGTGGAGGAGGTGG
ATGGGAAGTTTGAGGCTTCCCTGTGA
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Coding sequence (CDS) from alignment at An01:2342309..2343234-

>CBS51388_000788-T1 ID=CBS51388_000788-T1|Name=CBS51388_000788-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2376bp|location=Sequence derived from alignment at An01:2342309..2343234- (Aspergillus niger CBS 513.88)
CGGTGAAAAACCCCCCTGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGC
CTCGTCGCGGGCCAGGTCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTC
GCACTTGGAGTTCCTGGAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTG
CCTATCTCTGCGGGACGGAGTTGACGGCCGCGGACATTATGATGAGTTTC
CCGGTGATTGCTATGTCCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCC
GCTGCTGAAGGGGTATGCGGATAGATTGGAGAAGGAGGAGGGATATATTA
GGGCTGTGAAGAAGGTGGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTG
TGAGCTCTCCCAATCCCGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCC
TGCACCTCAACTACGAGCTAAAGATCTACCACCGCGGACCCGACAAGCTC
GCGCCCCCGGAACTGAAAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCT
GACTATCCAGCCCGCGAATGCCACTCCAGACCAGAAGCCCATTGTGCTGG
CTGAATCGGGTATTATCATCGAGTACCTGCTCGATCACTTCGGCTCCAAT
GCAGAGAAACCTCTCCTCCCGCCCCGGTGGAAAGATACCCAAGATGGTGT
AGTTGGCGGAGAAACAGAGGAATGGATGCGCTATCGGTACTTCATGCACT
ATGCTGAGGGCAGTCTCATGCCGTTTTTGGTCATGCAGTTGGTTATGGAT
AATGACCGACCCCAACAAAGGCACCAAAATCACCCTCTACTGCGGTGAAA
AACCCCCCTGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGCCTCGTCGC
GGGCCAGGTCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTCGCACTTGG
AGTTCCTGGAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTGCCTATCTC
TGCGGGACGGAGTTGACGGCCGCGGACATTATGATGAGTTTCCCGGTGAT
TGCTATGTCCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCCGCTGCTGA
AGGGGTATGCGGATAGATTGGAGAAGGAGGAGGGATATATTAGGGCTGTG
AAGAAGGTGGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTGTGAGCTCT
CCCAATCCCGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCCTGCACCTC
AACTACGAGCTAAAGATCTACCACCGCGGACCCGACAAGCTCGCGCCCCC
GGAACTGAAAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCTGACTATCC
AGCCCGCGAATGCCACTCCAGACCAGAAGCCCATTGTGCTGGCTGAATCG
GGTATTATCATCGAGTACCTGCTCGATCACTTCGGCTCCAATGCAGAGAA
ACCTCTCCTCCCGCCCCGGTGGAAAGATACCCAAGATGGTGTAGTTGGCG
GAGAAACAGAGGAATGGATGCGCTATCGGTACTTCATGCACTATGCTGAG
GGCAGTCTCATGCCGTTTTTGGTCATGCAGTTGGTTATGGATAATGACCG
ACCCCAACAAAGGCACCAAAATCACCCTCTACTGCGGTGAAAAACCCCCC
TGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGGCCAGG
TCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTCGCACTTGGAGTTCCTG
GAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTGCCTATCTCTGCGGGAC
GGAGTTGACGGCCGCGGACATTATGATGAGTTTCCCGGTGATTGCTATGT
CCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCCGCTGCTGAAGGGGTAT
GCGGATAGATTGGAGAAGGAGGAGGGATATATTAGGGCTGTGAAGAAGGT
GGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTGTGAGCTCTCCCAATCC
CGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCCTGCACCTCAACTACGA
GCTAAAGATCTACCACCGCGGACCCGACAAGCTCGCGCCCCCGGAACTGA
AAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCTGACTATCCAGCCCGCG
AATGCCACTCCAGACCAGAAGCCCATTGTGCTGGCTGAATCGGGTATTAT
CATCGAGTACCTGCTCGATCACTTCGGCTCCAATGCAGAGAAACCTCTCC
TCCCGCCCCGGTGGAAAGATACCCAAGATGGTGTAGTTGGCGGAGAAACA
GAGGAATGGATGCGCTATCGGTACTTCATGCACTATGCTGAGGGCAGTCT
CATGCCGTTTTTGGTCATGCAGTTGGTTATGGATAATGACCGACCCCAAC
AAAGGCACCAAAATCACCCTCTACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000788CBS51388_000788Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000788-T1CBS51388_000788-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000788-T1.cdsCBS51388_000788-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000788-T1.exon3CBS51388_000788-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000788-T1.exon2CBS51388_000788-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000788-T1.exon1CBS51388_000788-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR004046
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF13410
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2342309..2343234 -
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