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CBS51388_000791-T1, CBS51388_000791-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000791-T1
Unique NameCBS51388_000791-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2345702..2346845+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000791-T1 ID=CBS51388_000791-T1|Name=CBS51388_000791-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1144bp|location=Sequence derived from alignment at An01:2345702..2346845+ (Aspergillus niger CBS 513.88)
ATGGACTTCGCATCGTTGATGTCCAAAGAGATTTCCAAAGCAAAACCCAA
AGCAGACTCCCAAGATTCCTCCAAGCCCAAATACACCCGGCGCGGCGATC
TCGAAGCCGCCCGCATCGCAGCCTACAATGAAGAACAAGAGCGCCTAGCC
CGCGAACGCGAAGAGCGTAACGCCCAGAAACGCAAGCTCGAAGACGAAGA
AGCCGACCGCCGTCGCGAGCGGGAAGAGAAGAAGCGCAAACTGGCCGAGG
AGTCGCGCAAGAAGCGCGAAGAGGAGGAAGCTGCTCGCGAACGAGAGCGC
AGGAAGAGACTCGGCTTGCCGGAACTGCCGCCTACAGAGTCTGGAGATGA
TAAAGAGGGTGAGGGTAAGGAAGGCGGCGAGGAGGATATACCGGAGGAGG
AGCTGTTGAAGAAGTTACGGGAGATGGAGGAGCCGGCGATATTGTTTGGG
GAGACGCATAAGGGCCGGCTGAGGCGGTACAGGAGGCTGTTGCAGCGGTC
GTTGACGCCGCAGCCGCAGTTGTCGGATGGGCCGATCCCGACAACGCTGG
AGCTGGTGCCGGAGGTGGACATGAAGATTCCGGAGACGGCGCCGAAGGAT
CTGGAGGGGAAGAAGTTCTTGTTTCGCCAGCTGGCGTCGTACTTTAATAT
GGTGTTGCGGGAGTGGGAGTTGGCGTTGGCGAAGCGAGATGCGTCGGTGA
AGTTGAGCTTGCAGGGAAAACAGGCGTATAATGCGATGGTGCAGTCGCGG
GAGAACATGAAGCCGTTGTTTCGCAAGTTCGAGAAGGTTGATATTGATGA
TGGAGTGCTCGACCATGTGGTTGAGATTGTGTCCAAGGCGCAGCAACGGC
GGTATGTCGATGCTAATGATGCCTACCTTCGGTTGAGTATTGGAAAAGCG
TACGTATCTTCTTTCTGTTCTGAGGCTTTGTTCCTGGCTAATGTTTTGCA
GTGCTTGGCCTATTGGTGTGACCATGGTTGGTATTCACGAACGTTCCGCA
CGAGAGAAGCTGCATCAGAGCGATCAGCAGGCGCATATTCTGAGTGACGA
GATTACGCGCAAGTACTTGCAGAGCATCAAGCGGTGCCTCAGCTTTGCGC
AGACGCGTTGGCCCCCGGATGACCAGTTGCAGATCATGGGCTAG
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Coding sequence (CDS) from alignment at An01:2345702..2346845+

>CBS51388_000791-T1 ID=CBS51388_000791-T1|Name=CBS51388_000791-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2184bp|location=Sequence derived from alignment at An01:2345702..2346845+ (Aspergillus niger CBS 513.88)
ATGGACTTCGCATCGTTGATGTCCAAAGAGATTTCCAAAGCAAAACCCAA
AGCAGACTCCCAAGATTCCTCCAAGCCCAAATACACCCGGCGCGGCGATC
TCGAAGCCGCCCGCATCGCAGCCTACAATGAAGAACAAGAGCGCCTAGCC
CGCGAACGCGAAGAGCGTAACGCCCAGAAACGCAAGCTCGAAGACGAAGA
AGCCGACCGCCGTCGCGAGCGGGAAGAGAAGAAGCGCAAACTGGCCGAGG
AGTCGCGCAAGAAGCGCGAAGAGGAGGAAGCTGCTCGCGAACGAGAGCGC
AGGAAGAGACTCGGCTTGCCGGAACTGCCGCCTACAGAGTCTGGAGATGA
TAAAGAGGGTGAGGGTAAGGAAGGCGGCGAGGAGGATATACCGGAGGAGG
AGCTGTTGAAGAAGTTACGGGAGATGGAGGAGCCGGCGATATTGTTTGGG
GAGACGCATAAGGGCCGGCTGAGGCGGTACAGGAGGCTGTTGCAGCGGTC
GTTGACGCCGCAGCCGCAGTTGTCGGATGGGCCGATCCCGACAACGCTGG
AGCTGGTGCCGGAGGTGGACATGAAGATTCCGGAGACGGCGCCGAAGGAT
CTGGAGGGGAAGAAGTTCTTGTTTCGCCAGCTGGCGTCGTACTTTAATAT
GGTGTTGCGGGAGTGGGAGTTGGCGTTGGCGAAGCGAGATGCGTCGGTGA
AGTTGAGCTTGCAGGGAAAACAGGCGTATAATGCGATGGTGCAGTCGCGG
GAGAACATGAAGCCGTTGTTTCGCAAGTTCGAGAAGGTTGATATTGATGA
TGGAGTGCTCGACCATGTGGTTGAGATTGTGTCCAAGGCGCAGCAACGGC
GGTATGTCGATGCTAATGATGCCTACCTTCGGTTGAGTATTGGAAAAGCT
GCTTGGCCTATTGGTGTGACCATGGTTGGTATTCACGAACGTTCCGCACG
AGAGAAGCTGCATCAGAGCGATCAGCAGGCGCATATTCTGAGTGACGAGA
TTACGCGCAAGTACTTGCAGAGCATCAAGCGGTGCCTCAGCTTTGCGCAG
ACGCGTTGGCCCCCGGATGACCAGTTGCAGATCATGGGCTAGATGGACTT
CGCATCGTTGATGTCCAAAGAGATTTCCAAAGCAAAACCCAAAGCAGACT
CCCAAGATTCCTCCAAGCCCAAATACACCCGGCGCGGCGATCTCGAAGCC
GCCCGCATCGCAGCCTACAATGAAGAACAAGAGCGCCTAGCCCGCGAACG
CGAAGAGCGTAACGCCCAGAAACGCAAGCTCGAAGACGAAGAAGCCGACC
GCCGTCGCGAGCGGGAAGAGAAGAAGCGCAAACTGGCCGAGGAGTCGCGC
AAGAAGCGCGAAGAGGAGGAAGCTGCTCGCGAACGAGAGCGCAGGAAGAG
ACTCGGCTTGCCGGAACTGCCGCCTACAGAGTCTGGAGATGATAAAGAGG
GTGAGGGTAAGGAAGGCGGCGAGGAGGATATACCGGAGGAGGAGCTGTTG
AAGAAGTTACGGGAGATGGAGGAGCCGGCGATATTGTTTGGGGAGACGCA
TAAGGGCCGGCTGAGGCGGTACAGGAGGCTGTTGCAGCGGTCGTTGACGC
CGCAGCCGCAGTTGTCGGATGGGCCGATCCCGACAACGCTGGAGCTGGTG
CCGGAGGTGGACATGAAGATTCCGGAGACGGCGCCGAAGGATCTGGAGGG
GAAGAAGTTCTTGTTTCGCCAGCTGGCGTCGTACTTTAATATGGTGTTGC
GGGAGTGGGAGTTGGCGTTGGCGAAGCGAGATGCGTCGGTGAAGTTGAGC
TTGCAGGGAAAACAGGCGTATAATGCGATGGTGCAGTCGCGGGAGAACAT
GAAGCCGTTGTTTCGCAAGTTCGAGAAGGTTGATATTGATGATGGAGTGC
TCGACCATGTGGTTGAGATTGTGTCCAAGGCGCAGCAACGGCGGTATGTC
GATGCTAATGATGCCTACCTTCGGTTGAGTATTGGAAAAGCTGCTTGGCC
TATTGGTGTGACCATGGTTGGTATTCACGAACGTTCCGCACGAGAGAAGC
TGCATCAGAGCGATCAGCAGGCGCATATTCTGAGTGACGAGATTACGCGC
AAGTACTTGCAGAGCATCAAGCGGTGCCTCAGCTTTGCGCAGACGCGTTG
GCCCCCGGATGACCAGTTGCAGATCATGGGCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005681spliceosomal complex
Vocabulary: Biological Process
TermDefinition
GO:0008380RNA splicing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000791CBS51388_000791Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000791-T1.exon1CBS51388_000791-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000791-T1.exon2CBS51388_000791-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000791-T1.cdsCBS51388_000791-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000791-T1CBS51388_000791-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926420U
DBxrefInterPro:IPR036285
DBxrefInterPro:IPR004098
DBxrefInterPro:IPR014906
DBxrefPFAM:PF08799
DBxrefPFAM:PF02840
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2345702..2346845 +
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