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CBS51388_000796-T1, CBS51388_000796-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000796-T1
Unique NameCBS51388_000796-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2354083..2355661-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000796-T1 ID=CBS51388_000796-T1|Name=CBS51388_000796-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1579bp|location=Sequence derived from alignment at An01:2354083..2355661- (Aspergillus niger CBS 513.88)
ATGGTCAGTGACTTTTTCTTTCCCCAACCAGGTCAGTCGTTCTGTCTCAT
TCTCTTGTCTCTCCGACGACCAGCTACTGATGGTCCCAGGCGGGATTGAA
AGTCACATCTATCAGCTATCGACCGTAAGATTGCTAGACCTCTCGCTCGA
GCCAACGCTTATCGCTCTATAGAAGCTTATCGATCGCGGCCATAAAGTCA
TCATCATCACCCATGCCTACAAGGGACGCACTGGCGTTCGCTATCTCACC
AATGGGCTCAAAGTTTACCATGTCCCCTTCTTCGTGATCTACCGGGAGTC
GACCATGCCGACGGTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGA
TTCGTGAGCAAATTCAAATTGTACATGGCCATGCAAGTTTGAGCAGCTTT
TGTCACGAAGCTATTCTTCATGCCCGGACGATGGGCCTCCGTACGGTTTT
CACCGACCATTCGCTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCA
ACAAGCTGCTCAAGTTCATTTTGAGCGACGTAGACCATGTTATTTGTGTC
AGCCATACATGGTACGTCAACTACATGGATTATACTGAAAGCATACTAAC
TTTAAGGGCTAGCAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGT
TGATGGTCTCTGTTATTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCA
CCAGAACCACGGCCAATCGCGCGACTTATGGAGCCCAATGATATTATCAC
GATCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTA
TTGCCGCCATTCCTCGGATCCTTGCCTCTCATCCGAATGTACGGTTCATC
ATTGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAGATGCTAGAAAG
GAATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAG
AGGTCCGTGACGTGATGATCCGGGGCCACATTTATTTACATCCGAGTTTG
ACTGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGCTGTGGTCTCTA
CGTGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACA
TGACAACTTTTGCGAAACCGGAGGAGGACGATATCGTGCTCGCCACTGGA
AAAGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACGGATCGGTTCCA
TGACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGG
AACGTGTATACCAAGGCATCTCCGGGGACATTAGCCCCGAGGAATTCTAC
GGCTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGATCGGGTGCGAAG
CTTTGCCCTCATTGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGG
CAGGCAAGCTGTTTTGCCTCTGCGTGGTGATCGACTTCTTACTTTATGTG
TTCTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATTGCGCGCAGCTG
GCCCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATA
AAGGCGACCGTCTGGGACCTGCATCTTGA
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Coding sequence (CDS) from alignment at An01:2354083..2355661-

>CBS51388_000796-T1 ID=CBS51388_000796-T1|Name=CBS51388_000796-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5688bp|location=Sequence derived from alignment at An01:2354083..2355661- (Aspergillus niger CBS 513.88)
CAAAGAGAACACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCTG
TTATTCCCAATGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACGG
CCAATCGCGCGACTTATGGAGCCCAATGATATTATCACGATCGTTGTCAT
ATCTCGTCTTTTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATTC
CTCGGATCCTTGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATCA
GGACCCAAGGCCATCGATCTCGAACAGATGCTAGAAAGGAATGTATTGCA
GGACAAGGTTGAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGACG
TGATGATCCGGGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTTT
GGTACTGTCCTTGTGGAAGCTGCAAGCTGTGGTCTCTACGTGGTGTGCAC
ACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTTG
CGAAACCGGAGGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGCA
GCATTACGTTCGAACAAAGTCCGCACGGATCGGTTCCATGACCAGGTCAA
GATGATGTATTCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTATACC
AAGGCATCTCCGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCCC
GGACAGGGATGGGAGGCCGGCCGGGATCGGGTGCGAAGCTTTGCCCTCAT
TGATCGCCTAAAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTGT
TTTGCCTCTGCGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGATG
TGGTTTCCCCGTGCGAATATCGACATTGCGCGCAGCTGGCCCAAGAAAAT
TAACCGAAAGGAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGTC
TGGGACCTGCATCTTGAAAGCTTATCGATCGCGGCCATAAAGTCATCATC
ATCACCCATGCCTACAAGGGACGCACTGGCGTTCGCTATCTCACCAATGG
GCTCAAAGTTTACCATGTCCCCTTCTTCGTGATCTACCGGGAGTCGACCA
TGCCGACGGTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGATTCGT
GAGCAAATTCAAATTGTACATGGCCATGCAAGTTTGAGCAGCTTTTGTCA
CGAAGCTATTCTTCATGCCCGGACGATGGGCCTCCGTACGGTTTTCACCG
ACCATTCGCTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCAACAAG
CTGCTCAAGTTCATTTTGAGCGACGTAGACCATGTTATTTGTGTCAGCCA
TACATGGCGGGATTGAAAGTCACATCTATCAGCTATCGACCATGGTCAGT
GACTTTTTCTTTCCCCAACCAGCAAAGAGAACACGGTGCTTCGAGCCTCG
CTAGACCCGTTGATGGTCTCTGTTATTCCCAATGCGGTGGTTGCAGAGAA
CTTCCGACCACCAGAACCACGGCCAATCGCGCGACTTATGGAGCCCAATG
ATATTATCACGATCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACC
GATCTCCTTATTGCCGCCATTCCTCGGATCCTTGCCTCTCATCCGAATGT
ACGGTTCATCATTGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAGA
TGCTAGAAAGGAATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTG
CGACACGAAGAGGTCCGTGACGTGATGATCCGGGGCCACATTTATTTACA
TCCGAGTTTGACTGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGCT
GTGGTCTCTACGTGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTT
CCTCAACACATGACAACTTTTGCGAAACCGGAGGAGGACGATATCGTGCT
CGCCACTGGAAAAGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACGG
ATCGGTTCCATGACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCT
GAGCGTACGGAACGTGTATACCAAGGCATCTCCGGGGACATTAGCCCCGA
GGAATTCTACGGCTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGATC
GGGTGCGAAGCTTTGCCCTCATTGATCGCCTAAAACGATACTATGGATGC
GGAGTGTGGGCAGGCAAGCTGTTTTGCCTCTGCGTGGTGATCGACTTCTT
ACTTTATGTGTTCTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATTG
CGCGCAGCTGGCCCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGG
TCTACATATAAAGGCGACCGTCTGGGACCTGCATCTTGAAAGCTTATCGA
TCGCGGCCATAAAGTCATCATCATCACCCATGCCTACAAGGGACGCACTG
GCGTTCGCTATCTCACCAATGGGCTCAAAGTTTACCATGTCCCCTTCTTC
GTGATCTACCGGGAGTCGACCATGCCGACGGTCTTCTCATTCTTCCCTAT
CTTTCGAAACATAGTGATTCGTGAGCAAATTCAAATTGTACATGGCCATG
CAAGTTTGAGCAGCTTTTGTCACGAAGCTATTCTTCATGCCCGGACGATG
GGCCTCCGTACGGTTTTCACCGACCATTCGCTGTTTGGATTCGCAGATGC
AGCATCAATTCTTACCAACAAGCTGCTCAAGTTCATTTTGAGCGACGTAG
ACCATGTTATTTGTGTCAGCCATACATGGCGGGATTGAAAGTCACATCTA
TCAGCTATCGACCATGGTCAGTGACTTTTTCTTTCCCCAACCAGCAAAGA
GAACACGGTGCTTCGAGCCTCGCTAGACCCGTTGATGGTCTCTGTTATTC
CCAATGCGGTGGTTGCAGAGAACTTCCGACCACCAGAACCACGGCCAATC
GCGCGACTTATGGAGCCCAATGATATTATCACGATCGTTGTCATATCTCG
TCTTTTCTACAATAAAGGAACCGATCTCCTTATTGCCGCCATTCCTCGGA
TCCTTGCCTCTCATCCGAATGTACGGTTCATCATTGCCGGATCAGGACCC
AAGGCCATCGATCTCGAACAGATGCTAGAAAGGAATGTATTGCAGGACAA
GGTTGAATTGCTTGGTTCGGTGCGACACGAAGAGGTCCGTGACGTGATGA
TCCGGGGCCACATTTATTTACATCCGAGTTTGACTGAAGCGTTTGGTACT
GTCCTTGTGGAAGCTGCAAGCTGTGGTCTCTACGTGGTGTGCACACGCGT
CGGTGGCATTCCTGAGGTGCTTCCTCAACACATGACAACTTTTGCGAAAC
CGGAGGAGGACGATATCGTGCTCGCCACTGGAAAAGCCATCGCAGCATTA
CGTTCGAACAAAGTCCGCACGGATCGGTTCCATGACCAGGTCAAGATGAT
GTATTCTTGGACGGATGTAGCTGAGCGTACGGAACGTGTATACCAAGGCA
TCTCCGGGGACATTAGCCCCGAGGAATTCTACGGCTACTACCCCGGACAG
GGATGGGAGGCCGGCCGGGATCGGGTGCGAAGCTTTGCCCTCATTGATCG
CCTAAAACGATACTATGGATGCGGAGTGTGGGCAGGCAAGCTGTTTTGCC
TCTGCGTGGTGATCGACTTCTTACTTTATGTGTTCTTGGAGATGTGGTTT
CCCCGTGCGAATATCGACATTGCGCGCAGCTGGCCCAAGAAAATTAACCG
AAAGGAAAACAAACGGCCGGGGTCTACATATAAAGGCGACCGTCTGGGAC
CTGCATCTTGAAAGCTTATCGATCGCGGCCATAAAGTCATCATCATCACC
CATGCCTACAAGGGACGCACTGGCGTTCGCTATCTCACCAATGGGCTCAA
AGTTTACCATGTCCCCTTCTTCGTGATCTACCGGGAGTCGACCATGCCGA
CGGTCTTCTCATTCTTCCCTATCTTTCGAAACATAGTGATTCGTGAGCAA
ATTCAAATTGTACATGGCCATGCAAGTTTGAGCAGCTTTTGTCACGAAGC
TATTCTTCATGCCCGGACGATGGGCCTCCGTACGGTTTTCACCGACCATT
CGCTGTTTGGATTCGCAGATGCAGCATCAATTCTTACCAACAAGCTGCTC
AAGTTCATTTTGAGCGACGTAGACCATGTTATTTGTGTCAGCCATACATG
GCGGGATTGAAAGTCACATCTATCAGCTATCGACCATGGTCAGTGACTTT
TTCTTTCCCCAACCAGCAAAGAGAACACGGTGCTTCGAGCCTCGCTAGAC
CCGTTGATGGTCTCTGTTATTCCCAATGCGGTGGTTGCAGAGAACTTCCG
ACCACCAGAACCACGGCCAATCGCGCGACTTATGGAGCCCAATGATATTA
TCACGATCGTTGTCATATCTCGTCTTTTCTACAATAAAGGAACCGATCTC
CTTATTGCCGCCATTCCTCGGATCCTTGCCTCTCATCCGAATGTACGGTT
CATCATTGCCGGATCAGGACCCAAGGCCATCGATCTCGAACAGATGCTAG
AAAGGAATGTATTGCAGGACAAGGTTGAATTGCTTGGTTCGGTGCGACAC
GAAGAGGTCCGTGACGTGATGATCCGGGGCCACATTTATTTACATCCGAG
TTTGACTGAAGCGTTTGGTACTGTCCTTGTGGAAGCTGCAAGCTGTGGTC
TCTACGTGGTGTGCACACGCGTCGGTGGCATTCCTGAGGTGCTTCCTCAA
CACATGACAACTTTTGCGAAACCGGAGGAGGACGATATCGTGCTCGCCAC
TGGAAAAGCCATCGCAGCATTACGTTCGAACAAAGTCCGCACGGATCGGT
TCCATGACCAGGTCAAGATGATGTATTCTTGGACGGATGTAGCTGAGCGT
ACGGAACGTGTATACCAAGGCATCTCCGGGGACATTAGCCCCGAGGAATT
CTACGGCTACTACCCCGGACAGGGATGGGAGGCCGGCCGGGATCGGGTGC
GAAGCTTTGCCCTCATTGATCGCCTAAAACGATACTATGGATGCGGAGTG
TGGGCAGGCAAGCTGTTTTGCCTCTGCGTGGTGATCGACTTCTTACTTTA
TGTGTTCTTGGAGATGTGGTTTCCCCGTGCGAATATCGACATTGCGCGCA
GCTGGCCCAAGAAAATTAACCGAAAGGAAAACAAACGGCCGGGGTCTACA
TATAAAGGCGACCGTCTGGGACCTGCATCTTGAAAGCTTATCGATCGCGG
CCATAAAGTCATCATCATCACCCATGCCTACAAGGGACGCACTGGCGTTC
GCTATCTCACCAATGGGCTCAAAGTTTACCATGTCCCCTTCTTCGTGATC
TACCGGGAGTCGACCATGCCGACGGTCTTCTCATTCTTCCCTATCTTTCG
AAACATAGTGATTCGTGAGCAAATTCAAATTGTACATGGCCATGCAAGTT
TGAGCAGCTTTTGTCACGAAGCTATTCTTCATGCCCGGACGATGGGCCTC
CGTACGGTTTTCACCGACCATTCGCTGTTTGGATTCGCAGATGCAGCATC
AATTCTTACCAACAAGCTGCTCAAGTTCATTTTGAGCGACGTAGACCATG
TTATTTGTGTCAGCCATACATGGCGGGATTGAAAGTCACATCTATCAGCT
ATCGACCATGGTCAGTGACTTTTTCTTTCCCCAACCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006506GPI anchor biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GPI3CBS51388_000796Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000796-T1CBS51388_000796-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000796-T1.cdsCBS51388_000796-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000796-T1.exon4CBS51388_000796-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_000796-T1.exon3CBS51388_000796-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000796-T1.exon2CBS51388_000796-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000796-T1.exon1CBS51388_000796-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09262TO9
NoteCAZy:GT4
DBxrefInterPro:IPR001296
DBxrefInterPro:IPR013234
DBxrefPFAM:PF08288
DBxrefPFAM:PF13579
DBxrefPFAM:PF13692
DBxrefPFAM:PF13439
DBxrefPFAM:PF00534
ProductPhosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2354083..2355661 -
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