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CBS51388_000800-T1, CBS51388_000800-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000800-T1
Unique NameCBS51388_000800-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2366362..2367895+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000800-T1 ID=CBS51388_000800-T1|Name=CBS51388_000800-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1534bp|location=Sequence derived from alignment at An01:2366362..2367895+ (Aspergillus niger CBS 513.88)
ATGACCACTCTCACACCAACCCCCGCCAATTCCACCAGCACTCCCATAAC
CCACACTCTCTCCACCTGGTTGGAAGACCTCACTCCGGAGTCTATTCCCG
TCGAAGTTCGCGAACGAGCCAAATACCTCATTCTCGATGGATTAGCCTGT
GCTCTACTGGGTGCACGACTCCCCTGGTCCGTCAAGGCGCATGATGCTAT
CACTACCATTGAGGGTCAGGGAAAATGTACCGTTATCGGATGGAATGAGG
TATTCCATTCCCTTCTGATCAAACTTCCCTTCCCAAACAGATGAGTAAAG
GACAAGAAACTAATGAGACTGATAGACCCTCTCCCCCAATGCCGCCGCCC
TCCTGAACAGCACCTTCCTCCAAGGCTTCGACCTTGACGACATCCACGTC
GAGGCCCCCATACACACCATGTCCGTCATCCTCCCAGCGATCCTCGCAGC
TGCAGAGCAGGAGCATGGCGGCTCGACTCGCCCTATCAGCGGGAATGACT
TCATTACCGCCACAGTCGCTGGCTGCGAAACTGGCCCTCGCGTCGGCTAC
GCCCTGGGCGGAACGCACATGCTCACCATTGGATGGCATTGCGGTGCCAT
CTTCGGTCCTGCTGCCTCCGCAGCAGCCGTCTCCAAGCTCCTGAATCTTC
CCGCCGCGCAGATCGAAGATGCACTGGGCATGGCGTGCACGCAGGCCTGC
GGGCTCATGTCGGTGCAGTTTGAGAGCATGGTGAAGCGCATGCAGCATGG
GTTTGCATCGCGGAGCGGAGTACTCGCCACCTATTTGGCGAAGCAGGGGT
TTACGGGGATCAAGGAGATCTTTGATCGCGAGTATGGTGGGTTCTTGAAG
ATGTTTTCGTACGGGGCGGAGACGGAGCGCAAGTATTACCCGGAGGAGGT
CTGCAAGGGATTAGGGGAAGTGTGGCAGACCAAGAAGATCAAGCAGAAGT
TGCATGCGCTGTGCGCGGTGTCGCATTGTACGGTGGATTGTATTAAGGAC
CTGCAGGCCATGTATCCTGCGAAGATGGGTGAGTGGAAGAAAATCGTCAA
GATTGAGGCGGAGATGGCGAGGGCCGCGATGAAGAAGGGTGGCTGGGCAC
CGGAGAAGCCAGCCACCGCCACGGCGGCGCAGATGAGTATACCGTATGCG
GTGGCGTTGCAGGTTCTGGATGGGGAGATTGTGCCGGGGCAGTTTGCGCC
GGGCATGTTGAATCGGGAGGAGTTATGGGATGTGATTAGGCTGGTGGAAT
GTCGGGAGGCCAAGGAGCTGGATAATACGTGGGCGCAGAGGGTCAAGATC
ACGTTTGAGGATGGGGAGGTGGTGGAGAAGTTGTTGAAGGCTCCGAAGGG
AGTCCATCCTGGGGTGACGAATGAGGAGGTGTTGCAGAAGTGGCGGGCTG
TGACGAAGGGGGTAATTTCGGAAGAGAGGCAGAAGAAGATCGAGGAGATT
GTGTTGAATTTGGAAGAGGTGGAGGATGTGGCTGGTGTTTTGGGCGAGTT
GTTGAGGGAAGAGACGGTGAATGTGCTGCAGTAG
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Coding sequence (CDS) from alignment at An01:2366362..2367895+

>CBS51388_000800-T1 ID=CBS51388_000800-T1|Name=CBS51388_000800-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2916bp|location=Sequence derived from alignment at An01:2366362..2367895+ (Aspergillus niger CBS 513.88)
ATGACCACTCTCACACCAACCCCCGCCAATTCCACCAGCACTCCCATAAC
CCACACTCTCTCCACCTGGTTGGAAGACCTCACTCCGGAGTCTATTCCCG
TCGAAGTTCGCGAACGAGCCAAATACCTCATTCTCGATGGATTAGCCTGT
GCTCTACTGGGTGCACGACTCCCCTGGTCCGTCAAGGCGCATGATGCTAT
CACTACCATTGAGGGTCAGGGAAAATGTACCGTTATCGGATGGAATGAGA
CCCTCTCCCCCAATGCCGCCGCCCTCCTGAACAGCACCTTCCTCCAAGGC
TTCGACCTTGACGACATCCACGTCGAGGCCCCCATACACACCATGTCCGT
CATCCTCCCAGCGATCCTCGCAGCTGCAGAGCAGGAGCATGGCGGCTCGA
CTCGCCCTATCAGCGGGAATGACTTCATTACCGCCACAGTCGCTGGCTGC
GAAACTGGCCCTCGCGTCGGCTACGCCCTGGGCGGAACGCACATGCTCAC
CATTGGATGGCATTGCGGTGCCATCTTCGGTCCTGCTGCCTCCGCAGCAG
CCGTCTCCAAGCTCCTGAATCTTCCCGCCGCGCAGATCGAAGATGCACTG
GGCATGGCGTGCACGCAGGCCTGCGGGCTCATGTCGGTGCAGTTTGAGAG
CATGGTGAAGCGCATGCAGCATGGGTTTGCATCGCGGAGCGGAGTACTCG
CCACCTATTTGGCGAAGCAGGGGTTTACGGGGATCAAGGAGATCTTTGAT
CGCGAGTATGGTGGGTTCTTGAAGATGTTTTCGTACGGGGCGGAGACGGA
GCGCAAGTATTACCCGGAGGAGGTCTGCAAGGGATTAGGGGAAGTGTGGC
AGACCAAGAAGATCAAGCAGAAGTTGCATGCGCTGTGCGCGGTGTCGCAT
TGTACGGTGGATTGTATTAAGGACCTGCAGGCCATGTATCCTGCGAAGAT
GGGTGAGTGGAAGAAAATCGTCAAGATTGAGGCGGAGATGGCGAGGGCCG
CGATGAAGAAGGGTGGCTGGGCACCGGAGAAGCCAGCCACCGCCACGGCG
GCGCAGATGAGTATACCGTATGCGGTGGCGTTGCAGGTTCTGGATGGGGA
GATTGTGCCGGGGCAGTTTGCGCCGGGCATGTTGAATCGGGAGGAGTTAT
GGGATGTGATTAGGCTGGTGGAATGTCGGGAGGCCAAGGAGCTGGATAAT
ACGTGGGCGCAGAGGGTCAAGATCACGTTTGAGGATGGGGAGGTGGTGGA
GAAGTTGTTGAAGGCTCCGAAGGGAGTCCATCCTGGGGTGACGAATGAGG
AGGTGTTGCAGAAGTGGCGGGCTGTGACGAAGGGGGTAATTTCGGAAGAG
AGGCAGAAGAAGATCGAGGAGATTGTGTTGAATTTGGAAGAGGTGGAGGA
TGTGGCTGGTGTTTTGGGCGAGTTGTTGAGGGAAGAGACGGTGAATGTGC
TGCAGTAGATGACCACTCTCACACCAACCCCCGCCAATTCCACCAGCACT
CCCATAACCCACACTCTCTCCACCTGGTTGGAAGACCTCACTCCGGAGTC
TATTCCCGTCGAAGTTCGCGAACGAGCCAAATACCTCATTCTCGATGGAT
TAGCCTGTGCTCTACTGGGTGCACGACTCCCCTGGTCCGTCAAGGCGCAT
GATGCTATCACTACCATTGAGGGTCAGGGAAAATGTACCGTTATCGGATG
GAATGAGACCCTCTCCCCCAATGCCGCCGCCCTCCTGAACAGCACCTTCC
TCCAAGGCTTCGACCTTGACGACATCCACGTCGAGGCCCCCATACACACC
ATGTCCGTCATCCTCCCAGCGATCCTCGCAGCTGCAGAGCAGGAGCATGG
CGGCTCGACTCGCCCTATCAGCGGGAATGACTTCATTACCGCCACAGTCG
CTGGCTGCGAAACTGGCCCTCGCGTCGGCTACGCCCTGGGCGGAACGCAC
ATGCTCACCATTGGATGGCATTGCGGTGCCATCTTCGGTCCTGCTGCCTC
CGCAGCAGCCGTCTCCAAGCTCCTGAATCTTCCCGCCGCGCAGATCGAAG
ATGCACTGGGCATGGCGTGCACGCAGGCCTGCGGGCTCATGTCGGTGCAG
TTTGAGAGCATGGTGAAGCGCATGCAGCATGGGTTTGCATCGCGGAGCGG
AGTACTCGCCACCTATTTGGCGAAGCAGGGGTTTACGGGGATCAAGGAGA
TCTTTGATCGCGAGTATGGTGGGTTCTTGAAGATGTTTTCGTACGGGGCG
GAGACGGAGCGCAAGTATTACCCGGAGGAGGTCTGCAAGGGATTAGGGGA
AGTGTGGCAGACCAAGAAGATCAAGCAGAAGTTGCATGCGCTGTGCGCGG
TGTCGCATTGTACGGTGGATTGTATTAAGGACCTGCAGGCCATGTATCCT
GCGAAGATGGGTGAGTGGAAGAAAATCGTCAAGATTGAGGCGGAGATGGC
GAGGGCCGCGATGAAGAAGGGTGGCTGGGCACCGGAGAAGCCAGCCACCG
CCACGGCGGCGCAGATGAGTATACCGTATGCGGTGGCGTTGCAGGTTCTG
GATGGGGAGATTGTGCCGGGGCAGTTTGCGCCGGGCATGTTGAATCGGGA
GGAGTTATGGGATGTGATTAGGCTGGTGGAATGTCGGGAGGCCAAGGAGC
TGGATAATACGTGGGCGCAGAGGGTCAAGATCACGTTTGAGGATGGGGAG
GTGGTGGAGAAGTTGTTGAAGGCTCCGAAGGGAGTCCATCCTGGGGTGAC
GAATGAGGAGGTGTTGCAGAAGTGGCGGGCTGTGACGAAGGGGGTAATTT
CGGAAGAGAGGCAGAAGAAGATCGAGGAGATTGTGTTGAATTTGGAAGAG
GTGGAGGATGTGGCTGGTGTTTTGGGCGAGTTGTTGAGGGAAGAGACGGT
GAATGTGCTGCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000800CBS51388_000800Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000800-T1.exon1CBS51388_000800-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000800-T1.exon2CBS51388_000800-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000800-T1.cdsCBS51388_000800-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000800-T1CBS51388_000800-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR005656
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2366362..2367895 +
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