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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2509598..2510724- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000836-T1 ID=CBS51388_000836-T1|Name=CBS51388_000836-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1127bp|location=Sequence derived from alignment at An01:2509598..2510724- (Aspergillus niger CBS 513.88)
ATGCCACCAGATATGGCCTCTCCCTCTGCCGAAATTGACTTGGACGACGA
GCAGTATGACTCTGCCGAAGACGAAGACTTTCAGCTCGACGCAGCCCAAG
ATGACGCGGACTCGGGCATGTCCGATTCCGACGAAGAGGAGGCCGCCGAC
GAGCCAGCGTCTAAGCGGCGGAAGAAGGATACCAAGGATGCGCAAGGAGC
CGGTGATGACGACGAGCTGGCTTCTGGGGATGAGGCGATGATCCAGAAGG
CGAAGAATAAGAAGAGGAAGAAGGGAGAAGACGGGGATGTGGATCTTGAT
GATGAGGAAGGAGGAACGGGAGGTTTTGTGCGGACGCGCGCGATGAAGAT
GCGAATGTACGTGATTATATACATTTGTCTGACTGTCTACTAGATACATT
TGTACTGACGCAATACTATCGCAGTGGAGAGGAGCGCAAACCTCTCGCGA
AGATCGACGGCGCTACAGTTGACGTGGACGCGTTATGGGCGAAGATGAAC
GCTCCAGACTCGGGAGTAGATGCTTCTTCAGCGCAGGATGAGAGCAAGGA
AGCTACGCCTGCGGCTGGCCAGACCGACGGGGAAACGGCAGGTGGTGACG
AGGCGACCCCCTCCGCACAGGAGCCCCAGACGAAGTATACCGAAGAGATG
GTGAAGATCAAGCGCACATACAAGTTTGCAGGAGAGATGATTACGGAAGA
GAAGATTGTGCCCAAGGATTCAGCGGAAGCTAAGCTATTCCTGGCGGGCG
AGAAGGATGCGGAGACCGTGACTGCTGCAGATGTAGACAACGCAGCGAAT
GCTAAAGACGCCCTCAAACTGCGCAGACCGCTTCGACGACCTTCCCGCTT
CGATCCGAATCCCACCGGTTCGATCAAGAAGAGCTGGGAGAAACAGCCCG
TTACAGAGGCGACGGCTGGACAGGAGAACGCCCGGGGACCAAAGATCAAC
ACGGTCGAGAAGTCGCGTCTGGACTGGGCTGCGTATGTGGACCAGGCTGG
AATCAAGGACGAGCTCAACGTGCACAGCAAAGCGAAGGAGGGATTCCTGG
GTCGCATGGATTTCTTGGACCGCGTGGGGGCCAAGATAGACGAGGAGAGG
AGAAATGCTCGTCTGAAGGGGCTTTAA back to topCoding sequence (CDS) from alignment at An01:2509598..2510724- >CBS51388_000836-T1 ID=CBS51388_000836-T1|Name=CBS51388_000836-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2118bp|location=Sequence derived from alignment at An01:2509598..2510724- (Aspergillus niger CBS 513.88)
TGGAGAGGAGCGCAAACCTCTCGCGAAGATCGACGGCGCTACAGTTGACG
TGGACGCGTTATGGGCGAAGATGAACGCTCCAGACTCGGGAGTAGATGCT
TCTTCAGCGCAGGATGAGAGCAAGGAAGCTACGCCTGCGGCTGGCCAGAC
CGACGGGGAAACGGCAGGTGGTGACGAGGCGACCCCCTCCGCACAGGAGC
CCCAGACGAAGTATACCGAAGAGATGGTGAAGATCAAGCGCACATACAAG
TTTGCAGGAGAGATGATTACGGAAGAGAAGATTGTGCCCAAGGATTCAGC
GGAAGCTAAGCTATTCCTGGCGGGCGAGAAGGATGCGGAGACCGTGACTG
CTGCAGATGTAGACAACGCAGCGAATGCTAAAGACGCCCTCAAACTGCGC
AGACCGCTTCGACGACCTTCCCGCTTCGATCCGAATCCCACCGGTTCGAT
CAAGAAGAGCTGGGAGAAACAGCCCGTTACAGAGGCGACGGCTGGACAGG
AGAACGCCCGGGGACCAAAGATCAACACGGTCGAGAAGTCGCGTCTGGAC
TGGGCTGCGTATGTGGACCAGGCTGGAATCAAGGACGAGCTCAACGTGCA
CAGCAAAGCGAAGGAGGGATTCCTGGGTCGCATGGATTTCTTGGACCGCG
TGGGGGCCAAGATAGACGAGGAGAGGAGAAATGCTCGTCTGAAGGGGCTT
TAAATGCCACCAGATATGGCCTCTCCCTCTGCCGAAATTGACTTGGACGA
CGAGCAGTATGACTCTGCCGAAGACGAAGACTTTCAGCTCGACGCAGCCC
AAGATGACGCGGACTCGGGCATGTCCGATTCCGACGAAGAGGAGGCCGCC
GACGAGCCAGCGTCTAAGCGGCGGAAGAAGGATACCAAGGATGCGCAAGG
AGCCGGTGATGACGACGAGCTGGCTTCTGGGGATGAGGCGATGATCCAGA
AGGCGAAGAATAAGAAGAGGAAGAAGGGAGAAGACGGGGATGTGGATCTT
GATGATGAGGAAGGAGGAACGGGAGGTTTTGTGCGGACGCGCGCGATGAA
GATGCGAATTGGAGAGGAGCGCAAACCTCTCGCGAAGATCGACGGCGCTA
CAGTTGACGTGGACGCGTTATGGGCGAAGATGAACGCTCCAGACTCGGGA
GTAGATGCTTCTTCAGCGCAGGATGAGAGCAAGGAAGCTACGCCTGCGGC
TGGCCAGACCGACGGGGAAACGGCAGGTGGTGACGAGGCGACCCCCTCCG
CACAGGAGCCCCAGACGAAGTATACCGAAGAGATGGTGAAGATCAAGCGC
ACATACAAGTTTGCAGGAGAGATGATTACGGAAGAGAAGATTGTGCCCAA
GGATTCAGCGGAAGCTAAGCTATTCCTGGCGGGCGAGAAGGATGCGGAGA
CCGTGACTGCTGCAGATGTAGACAACGCAGCGAATGCTAAAGACGCCCTC
AAACTGCGCAGACCGCTTCGACGACCTTCCCGCTTCGATCCGAATCCCAC
CGGTTCGATCAAGAAGAGCTGGGAGAAACAGCCCGTTACAGAGGCGACGG
CTGGACAGGAGAACGCCCGGGGACCAAAGATCAACACGGTCGAGAAGTCG
CGTCTGGACTGGGCTGCGTATGTGGACCAGGCTGGAATCAAGGACGAGCT
CAACGTGCACAGCAAAGCGAAGGAGGGATTCCTGGGTCGCATGGATTTCT
TGGACCGCGTGGGGGCCAAGATAGACGAGGAGAGGAGAAATGCTCGTCTG
AAGGGGCTTTAAATGCCACCAGATATGGCCTCTCCCTCTGCCGAAATTGA
CTTGGACGACGAGCAGTATGACTCTGCCGAAGACGAAGACTTTCAGCTCG
ACGCAGCCCAAGATGACGCGGACTCGGGCATGTCCGATTCCGACGAAGAG
GAGGCCGCCGACGAGCCAGCGTCTAAGCGGCGGAAGAAGGATACCAAGGA
TGCGCAAGGAGCCGGTGATGACGACGAGCTGGCTTCTGGGGATGAGGCGA
TGATCCAGAAGGCGAAGAATAAGAAGAGGAAGAAGGGAGAAGACGGGGAT
GTGGATCTTGATGATGAGGAAGGAGGAACGGGAGGTTTTGTGCGGACGCG
CGCGATGAAGATGCGAAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011421 |
| DBxref | PFAM:PF07572 |
| Product | swr complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2509598..2510724 - |
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