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CBS51388_000847-T1, CBS51388_000847-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000847-T1
Unique NameCBS51388_000847-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2525814..2527493-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000847-T1 ID=CBS51388_000847-T1|Name=CBS51388_000847-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1680bp|location=Sequence derived from alignment at An01:2525814..2527493- (Aspergillus niger CBS 513.88)
ATGGCGGTCCCGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCA
GAATGCGCCTATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAA
GACAGTTCTACGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATG
GTGGACCGGTCTGAGTTTGTAGGTTCCCCTACGAATGTACTTTTTGGATC
TCAACTAACCGGCCTGGAGGCGTGGCGCATGCTCACTAGGTCGTTCATGA
CACCGGAAGACCAGAAAAAGGTTCTCGCATACTCCCCCATGTACCACGCG
CGCTTGTTCCGTGAGCAAGCGAATGTCCGCGTACAGCACTTCCACCCAAC
TCGCGCTGCCGCCGGCAAAGGCGAGGATGAATCGCCGTATCTCGACGGAA
ACCCTTCGTTCGATCGGCCTCTATTCGTACAATTCTGCGCCAATGATCCT
GATGATTTCTTGGAGGCCGCGCGTCATGTGGCACCATATTGCGATGCAGT
GGATCTCAATCTGGGATGTCCCCAAGGTATTGCGAAGAGGGGTCACTATG
GTGCTTTCCTTCAGGAGGACTGGGACCTGATTTACAGGCTGATTAACCGA
CTTCACAACGAACTCTCGATCCCAGTCACTGCCAAGTTTCGTATTCAGGA
AACGAAAGAGAAAACGCTCGAATATGCGAAGATGATCTTGTCTGCTGGTG
CAAACATAATCACTGTGCATGGACGGAGAAGAGAACAGAAAGGTCACAAC
ACTGGACTGGCTGATTGGAGCTACATTCGCTATCTCCGCGATAATCTTCC
CCCAGAGACGGTCATCTTCGCGAACGGCAACAACCTGAACTATGAAGATC
TGGACCGTTGTCTGGAAGAGACAGGAGCCGATGGTGTCATGAGTGCGGAA
GGCAACTTGTCTGATCCGTCAATTTTCAGCAAGCCCCCTCCGGTTGGCAG
TGAAGGAAGGGAATACTGGCGAGGCAGGGACGGAAAGGGCGGATATCGGA
TTGACGCCATGCTACGGCGGTACTTGGACATCATTTACAAGTACGTTCTT
GAACAACCTGTTCCGGAAAGGAAGCCTCTTTGGCTTCCCTCGGACGCAGT
GGAAGAGGAATTTGAACAGACAACCGAAACGACCGAGGAAGCAGAAGACG
GCCCACCTAAGAAGAAGCAAAAGCGCGAGAAGTCGAAGAGAGCGGCCTCC
CCCAGTCTTGGTGTAATGCAGGGTCATCTCTTCCAGCTGCTTCGCCCCAT
GGTCTCCGTGCATACCAATGTCCGTGATGCGCTAGCGAGATCAAGACCTG
GCGATATGCCCGCATTCGAGAATGTCTTGGCTCTCGTTGAGCAGGCAATC
AAGAAGGGTCTCAAGGAATACGAGCAGTTCCCGGAACGCTTTGAGAAGGA
TCCGAACCAAGAACTGACCGGATCCAAAGCGACTATTGCCGAGTACGGCA
GACCTTGGTGGATCTGCCAGCCACACATTCGGCCACTGCCTGAAGAGGCT
GTCGAGCTGGGCGCACTTACTGTGAAGAAGAAGAACGATGGCAACGAAAA
GCCTAAGGCGGACGAGTCTTCTGAAAAGGCCACCCCTGCTGCAGAGGGTT
CTGCCACTCCTTCGAAGTCGGACGTGGACGCGACCACCCCTGCCACGACG
ACTACTCCGGACAACCTGGTGAGCGGTTGA
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Coding sequence (CDS) from alignment at An01:2525814..2527493-

>CBS51388_000847-T1 ID=CBS51388_000847-T1|Name=CBS51388_000847-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3258bp|location=Sequence derived from alignment at An01:2525814..2527493- (Aspergillus niger CBS 513.88)
GCGTGGCGCATGCTCACTAGGTCGTTCATGACACCGGAAGACCAGAAAAA
GGTTCTCGCATACTCCCCCATGTACCACGCGCGCTTGTTCCGTGAGCAAG
CGAATGTCCGCGTACAGCACTTCCACCCAACTCGCGCTGCCGCCGGCAAA
GGCGAGGATGAATCGCCGTATCTCGACGGAAACCCTTCGTTCGATCGGCC
TCTATTCGTACAATTCTGCGCCAATGATCCTGATGATTTCTTGGAGGCCG
CGCGTCATGTGGCACCATATTGCGATGCAGTGGATCTCAATCTGGGATGT
CCCCAAGGTATTGCGAAGAGGGGTCACTATGGTGCTTTCCTTCAGGAGGA
CTGGGACCTGATTTACAGGCTGATTAACCGACTTCACAACGAACTCTCGA
TCCCAGTCACTGCCAAGTTTCGTATTCAGGAAACGAAAGAGAAAACGCTC
GAATATGCGAAGATGATCTTGTCTGCTGGTGCAAACATAATCACTGTGCA
TGGACGGAGAAGAGAACAGAAAGGTCACAACACTGGACTGGCTGATTGGA
GCTACATTCGCTATCTCCGCGATAATCTTCCCCCAGAGACGGTCATCTTC
GCGAACGGCAACAACCTGAACTATGAAGATCTGGACCGTTGTCTGGAAGA
GACAGGAGCCGATGGTGTCATGAGTGCGGAAGGCAACTTGTCTGATCCGT
CAATTTTCAGCAAGCCCCCTCCGGTTGGCAGTGAAGGAAGGGAATACTGG
CGAGGCAGGGACGGAAAGGGCGGATATCGGATTGACGCCATGCTACGGCG
GTACTTGGACATCATTTACAAGTACGTTCTTGAACAACCTGTTCCGGAAA
GGAAGCCTCTTTGGCTTCCCTCGGACGCAGTGGAAGAGGAATTTGAACAG
ACAACCGAAACGACCGAGGAAGCAGAAGACGGCCCACCTAAGAAGAAGCA
AAAGCGCGAGAAGTCGAAGAGAGCGGCCTCCCCCAGTCTTGGTGTAATGC
AGGGTCATCTCTTCCAGCTGCTTCGCCCCATGGTCTCCGTGCATACCAAT
GTCCGTGATGCGCTAGCGAGATCAAGACCTGGCGATATGCCCGCATTCGA
GAATGTCTTGGCTCTCGTTGAGCAGGCAATCAAGAAGGGTCTCAAGGAAT
ACGAGCAGTTCCCGGAACGCTTTGAGAAGGATCCGAACCAAGAACTGACC
GGATCCAAAGCGACTATTGCCGAGTACGGCAGACCTTGGTGGATCTGCCA
GCCACACATTCGGCCACTGCCTGAAGAGGCTGTCGAGCTGGGCGCACTTA
CTGTGAAGAAGAAGAACGATGGCAACGAAAAGCCTAAGGCGGACGAGTCT
TCTGAAAAGGCCACCCCTGCTGCAGAGGGTTCTGCCACTCCTTCGAAGTC
GGACGTGGACGCGACCACCCCTGCCACGACGACTACTCCGGACAACCTGG
TGAGCGGTTGAATGGCGGTCCCGGAGACACAGCCCGCTCCGCAAGGAAGC
GTTGCCGACCAGAATGCGCCTATAGCTGCTGCTGCTGAACCGAGAAAGAA
GCTCCTTGGAAGACAGTTCTACGAAAGTATTGGAAGCCCGAAGTACATTA
TTGCACCTATGGTGGACCGGTCTGAGTTTGCGTGGCGCATGCTCACTAGG
TCGTTCATGACACCGGAAGACCAGAAAAAGGTTCTCGCATACTCCCCCAT
GTACCACGCGCGCTTGTTCCGTGAGCAAGCGAATGTCCGCGTACAGCACT
TCCACCCAACTCGCGCTGCCGCCGGCAAAGGCGAGGATGAATCGCCGTAT
CTCGACGGAAACCCTTCGTTCGATCGGCCTCTATTCGTACAATTCTGCGC
CAATGATCCTGATGATTTCTTGGAGGCCGCGCGTCATGTGGCACCATATT
GCGATGCAGTGGATCTCAATCTGGGATGTCCCCAAGGTATTGCGAAGAGG
GGTCACTATGGTGCTTTCCTTCAGGAGGACTGGGACCTGATTTACAGGCT
GATTAACCGACTTCACAACGAACTCTCGATCCCAGTCACTGCCAAGTTTC
GTATTCAGGAAACGAAAGAGAAAACGCTCGAATATGCGAAGATGATCTTG
TCTGCTGGTGCAAACATAATCACTGTGCATGGACGGAGAAGAGAACAGAA
AGGTCACAACACTGGACTGGCTGATTGGAGCTACATTCGCTATCTCCGCG
ATAATCTTCCCCCAGAGACGGTCATCTTCGCGAACGGCAACAACCTGAAC
TATGAAGATCTGGACCGTTGTCTGGAAGAGACAGGAGCCGATGGTGTCAT
GAGTGCGGAAGGCAACTTGTCTGATCCGTCAATTTTCAGCAAGCCCCCTC
CGGTTGGCAGTGAAGGAAGGGAATACTGGCGAGGCAGGGACGGAAAGGGC
GGATATCGGATTGACGCCATGCTACGGCGGTACTTGGACATCATTTACAA
GTACGTTCTTGAACAACCTGTTCCGGAAAGGAAGCCTCTTTGGCTTCCCT
CGGACGCAGTGGAAGAGGAATTTGAACAGACAACCGAAACGACCGAGGAA
GCAGAAGACGGCCCACCTAAGAAGAAGCAAAAGCGCGAGAAGTCGAAGAG
AGCGGCCTCCCCCAGTCTTGGTGTAATGCAGGGTCATCTCTTCCAGCTGC
TTCGCCCCATGGTCTCCGTGCATACCAATGTCCGTGATGCGCTAGCGAGA
TCAAGACCTGGCGATATGCCCGCATTCGAGAATGTCTTGGCTCTCGTTGA
GCAGGCAATCAAGAAGGGTCTCAAGGAATACGAGCAGTTCCCGGAACGCT
TTGAGAAGGATCCGAACCAAGAACTGACCGGATCCAAAGCGACTATTGCC
GAGTACGGCAGACCTTGGTGGATCTGCCAGCCACACATTCGGCCACTGCC
TGAAGAGGCTGTCGAGCTGGGCGCACTTACTGTGAAGAAGAAGAACGATG
GCAACGAAAAGCCTAAGGCGGACGAGTCTTCTGAAAAGGCCACCCCTGCT
GCAGAGGGTTCTGCCACTCCTTCGAAGTCGGACGTGGACGCGACCACCCC
TGCCACGACGACTACTCCGGACAACCTGGTGAGCGGTTGAATGGCGGTCC
CGGAGACACAGCCCGCTCCGCAAGGAAGCGTTGCCGACCAGAATGCGCCT
ATAGCTGCTGCTGCTGAACCGAGAAAGAAGCTCCTTGGAAGACAGTTCTA
CGAAAGTATTGGAAGCCCGAAGTACATTATTGCACCTATGGTGGACCGGT
CTGAGTTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000847CBS51388_000847Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000847-T1CBS51388_000847-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000847-T1.cdsCBS51388_000847-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000847-T1.exon2CBS51388_000847-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000847-T1.exon1CBS51388_000847-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09262Q6S
DBxrefInterPro:IPR035587
DBxrefInterPro:IPR018517
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001269
DBxrefPFAM:PF01207
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2525814..2527493 -
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