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CBS51388_000858-T1, CBS51388_000858-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000858-T1
Unique NameCBS51388_000858-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2559716..2560568+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000858-T1 ID=CBS51388_000858-T1|Name=CBS51388_000858-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=853bp|location=Sequence derived from alignment at An01:2559716..2560568+ (Aspergillus niger CBS 513.88)
ATGTATACCCAGCGACCGTTGGCGTATGCCCCTACGCCGTATAGCTATAC
GCCCAACCCAGCGCTGGCGGCGTCTATCAACCTTGATGAAGTGAGTCGTC
TGGAGGTTGGAGAGTGTTGCTAGATTAGGACTGACTGTTGCGGCAGGAAG
TAAAACTAGCCTCCAGCGCTGCGGAGCGGGATCTCTACGAGTCGTTGGCT
GAAATCTACGGCATCATCGTCACTCTGGATGGCCTGGAGAAAGCTTATAT
CAAAGATGTGGTTACGGAAGCAGAGTACACGGAGACATGTACCCGGCTCT
TGAAGCAGTACAAGTCCAGTTTGGGTGATGAGACTGTTGCAAATGAGTTC
GTCGATCTAGAGACCTTCAAACGCACCTGGGAGGTGAGTATTACTATCGT
GTGCTTACAGTAAGACGATAGCTGATCACCTGGTTTTCTTTTGTGTAGCT
GGAATGCCCTCGCGCCACCGAACGTCTCCGCATTGGCCTCCCCGCGACAG
TCGAACAAGCCTCCCACAGCACACCCGCCGCGAACATGGCTCCAGCAGCT
GCAGGCCCTGCAGGAGCATCTGGTAGTCTGATATTGACGGCTACTGAGAA
TTTCATCACCTTCTTGGATGCGCTGAAGCTGAACATGGTGTCCAAGGACG
CACTGCACCCGCTTTTGTCGGAAGTGATCCAATCCGTCAATAAAGTCACC
GATGTCGATTTCGAGAACCGGGGCAAGATCATCCAATGGCTGATCACCTT
GAATCAGATGCGTGCAACCGAGGAACTCGGTGAAGACCAGGCTCGGGAGT
TGGCGTTCGACATTGAACAAGCATACCTGGGATTCAAGGCCACTTTGGGT
TGA
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Coding sequence (CDS) from alignment at An01:2559716..2560568+

>CBS51388_000858-T1 ID=CBS51388_000858-T1|Name=CBS51388_000858-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2196bp|location=Sequence derived from alignment at An01:2559716..2560568+ (Aspergillus niger CBS 513.88)
ATGTATACCCAGCGACCGTTGGCGTATGCCCCTACGCCGTATAGCTATAC
GCCCAACCCAGCGCTGGCGGCGTCTATCAACCTTGATGAAGAAGTAAAAC
TAGCCTCCAGCGCTGCGGAGCGGGATCTCTACGAGTCGTTGGCTGAAATC
TACGGCATCATCGTCACTCTGGATGGCCTGGAGAAAGCTTATATCAAAGA
TGTGGTTACGGAAGCAGAGTACACGGAGACATGTACCCGGCTCTTGAAGC
AGTACAAGTCCAGTTTGGGTGATGAGACTGTTGCAAATGAGTTCGTCGAT
CTAGAGACCTTCAAACGCACCTGGGAGCTGGAATGCCCTCGCGCCACCGA
ACGTCTCCGCATTGGCCTCCCCGCGACAGTCGAACAAGCCTCCCACAGCA
CACCCGCCGCGAACATGGCTCCAGCAGCTGCAGGCCCTGCAGGAGCATCT
GGTAGTCTGATATTGACGGCTACTGAGAATTTCATCACCTTCTTGGATGC
GCTGAAGCTGAACATGGTGTCCAAGGACGCACTGCACCCGCTTTTGTCGG
AAGTGATCCAATCCGTCAATAAAGTCACCGATGTCGATTTCGAGAACCGG
GGCAAGATCATCCAATGGCTGATCACCTTGAATCAGATGCGTGCAACCGA
GGAACTCGGTGAAGACCAGGCTCGGGAGTTGGCGTTCGACATTGAACAAG
CATACCTGGGATTCAAGGCCACTTTGGGTTGAATGTATACCCAGCGACCG
TTGGCGTATGCCCCTACGCCGTATAGCTATACGCCCAACCCAGCGCTGGC
GGCGTCTATCAACCTTGATGAAGAAGTAAAACTAGCCTCCAGCGCTGCGG
AGCGGGATCTCTACGAGTCGTTGGCTGAAATCTACGGCATCATCGTCACT
CTGGATGGCCTGGAGAAAGCTTATATCAAAGATGTGGTTACGGAAGCAGA
GTACACGGAGACATGTACCCGGCTCTTGAAGCAGTACAAGTCCAGTTTGG
GTGATGAGACTGTTGCAAATGAGTTCGTCGATCTAGAGACCTTCAAACGC
ACCTGGGAGCTGGAATGCCCTCGCGCCACCGAACGTCTCCGCATTGGCCT
CCCCGCGACAGTCGAACAAGCCTCCCACAGCACACCCGCCGCGAACATGG
CTCCAGCAGCTGCAGGCCCTGCAGGAGCATCTGGTAGTCTGATATTGACG
GCTACTGAGAATTTCATCACCTTCTTGGATGCGCTGAAGCTGAACATGGT
GTCCAAGGACGCACTGCACCCGCTTTTGTCGGAAGTGATCCAATCCGTCA
ATAAAGTCACCGATGTCGATTTCGAGAACCGGGGCAAGATCATCCAATGG
CTGATCACCTTGAATCAGATGCGTGCAACCGAGGAACTCGGTGAAGACCA
GGCTCGGGAGTTGGCGTTCGACATTGAACAAGCATACCTGGGATTCAAGG
CCACTTTGGGTTGAATGTATACCCAGCGACCGTTGGCGTATGCCCCTACG
CCGTATAGCTATACGCCCAACCCAGCGCTGGCGGCGTCTATCAACCTTGA
TGAAGAAGTAAAACTAGCCTCCAGCGCTGCGGAGCGGGATCTCTACGAGT
CGTTGGCTGAAATCTACGGCATCATCGTCACTCTGGATGGCCTGGAGAAA
GCTTATATCAAAGATGTGGTTACGGAAGCAGAGTACACGGAGACATGTAC
CCGGCTCTTGAAGCAGTACAAGTCCAGTTTGGGTGATGAGACTGTTGCAA
ATGAGTTCGTCGATCTAGAGACCTTCAAACGCACCTGGGAGCTGGAATGC
CCTCGCGCCACCGAACGTCTCCGCATTGGCCTCCCCGCGACAGTCGAACA
AGCCTCCCACAGCACACCCGCCGCGAACATGGCTCCAGCAGCTGCAGGCC
CTGCAGGAGCATCTGGTAGTCTGATATTGACGGCTACTGAGAATTTCATC
ACCTTCTTGGATGCGCTGAAGCTGAACATGGTGTCCAAGGACGCACTGCA
CCCGCTTTTGTCGGAAGTGATCCAATCCGTCAATAAAGTCACCGATGTCG
ATTTCGAGAACCGGGGCAAGATCATCCAATGGCTGATCACCTTGAATCAG
ATGCGTGCAACCGAGGAACTCGGTGAAGACCAGGCTCGGGAGTTGGCGTT
CGACATTGAACAAGCATACCTGGGATTCAAGGCCACTTTGGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000813ESCRT I complex
Vocabulary: Biological Process
TermDefinition
GO:0032509endosome transport via multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000858CBS51388_000858Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000858-T1.exon1CBS51388_000858-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000858-T1.exon2CBS51388_000858-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000858-T1.exon3CBS51388_000858-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000858-T1.cdsCBS51388_000858-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000858-T1CBS51388_000858-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037202
DBxrefInterPro:IPR017898
DBxrefInterPro:IPR017899
DBxrefInterPro:IPR038358
DBxrefInterPro:IPR007143
DBxrefInterPro:IPR037206
DBxrefPFAM:PF03997
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2559716..2560568 +
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