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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2560942..2562161+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000859-T1 ID=CBS51388_000859-T1|Name=CBS51388_000859-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1220bp|location=Sequence derived from alignment at An01:2560942..2562161+ (Aspergillus niger CBS 513.88)
ATGATAAGCGCCGATCCCGACGAGCCTCTCCACGGTACGTCTTCTTCCTC
GGAAATGCCCCCTGACATCTCGGGCGATAATGTACTGATAAGCCTGCTTC
AGTGTTCGATCTCCCTCAGATCCACACTAAACCCTCCGGCACTGAGCTCA
TTCAAGCTCTCGACCTACTAACAGTCAAACCGCGGAGTTTCGGGCCCGTA
GCCCATGTAGCGACAAAGGGCCGGACCGTGCAGCCTGCTGGAGTGACCCG
CTATCTGACATCCATCATCGCCAGCCCGCTGGCATGGCTCGACACTGACG
AGCTCCGAGAGGCCGTCTGGGATGCCGCTGCAGCCCGACTTAGCGAGCGC
TCCGGTCGAACCGGTACGCAGAACTGATATTGTCTTTTTGTAGTGCTCAT
TGCGCCATTTTCTTGCCGCATCTAACATGATGTCTTGCTCTTCGAGCGAA
TAGCCATGCCCGCCATGTCCCGAGTCTTCAGCATCCCTAGTACCACATCC
GATGGACTCGAAGTCGAGGAATTTACACTGACCCTCCACGAACCCTCCCT
AACAGCCGACAACCTGGGCATGAAAACCTGGGTCTCCTCATACCTCCTCT
CCCGCCGCCTTCACAACCTCCTCGAATCGCCCCCCAACCTCGTCCCCTCG
ACCTGCACCACTCCTCAACTCTGTCCAGACAACAACAAGACCCTCCGCGC
CCTGGAACTCGGCGCCGGAACAGGGCTCGTAGGCCTCTCCTTCGCCGCTT
TGCGCGGCTCCTCAGCCACCATCCATCTCACAGACCTCCCGGACATTGTG
CCCAATCTGGCCCACAACGCGGCTCTCAACGTCGAATTGCTCAATCGGAC
GGGCGGTGCCGTCACAACGGGTGTTCTTGATTGGACCGTTACCCCGGACC
CGCTGCCCACTGCACAAGAGCAGTACGATCTCATTCTTGCTGCGGATCCG
TTGTATTCGCCTAGTCATCCAAAGTTGCTGGTCGACACGATCACGCATTG
GCTGAGTAGGGGGCTGGATGCCCGTGTTGTGCTGGAAATGCCACTCCGGG
ATGCGTATCTGCCTCAGGTGCAGGAGCTGCGGGATCGGATGGGACGGTTG
GGGCTGGCGGTGGTGGATGAGGGTGAGGAGATTGGCTATGATGATTGGGA
GTCGGCGGACGGGGGCGCGTTGGAGGTGAAGTGTTGGTGGTCAGTTTGGG
GATGGAGCGAGAAGCTCTAG back to topCoding sequence (CDS) from alignment at An01:2560942..2562161+ >CBS51388_000859-T1 ID=CBS51388_000859-T1|Name=CBS51388_000859-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3186bp|location=Sequence derived from alignment at An01:2560942..2562161+ (Aspergillus niger CBS 513.88)
ATGATAAGCGCCGATCCCGACGAGCCTCTCCACGTGTTCGATCTCCCTCA
GATCCACACTAAACCCTCCGGCACTGAGCTCATTCAAGCTCTCGACCTAC
TAACAGTCAAACCGCGGAGTTTCGGGCCCGTAGCCCATGTAGCGACAAAG
GGCCGGACCGTGCAGCCTGCTGGAGTGACCCGCTATCTGACATCCATCAT
CGCCAGCCCGCTGGCATGGCTCGACACTGACGAGCTCCGAGAGGCCGTCT
GGGATGCCGCTGCAGCCCGACTTAGCGAGCGCTCCGGTCGAACCGCCATG
CCCGCCATGTCCCGAGTCTTCAGCATCCCTAGTACCACATCCGATGGACT
CGAAGTCGAGGAATTTACACTGACCCTCCACGAACCCTCCCTAACAGCCG
ACAACCTGGGCATGAAAACCTGGGTCTCCTCATACCTCCTCTCCCGCCGC
CTTCACAACCTCCTCGAATCGCCCCCCAACCTCGTCCCCTCGACCTGCAC
CACTCCTCAACTCTGTCCAGACAACAACAAGACCCTCCGCGCCCTGGAAC
TCGGCGCCGGAACAGGGCTCGTAGGCCTCTCCTTCGCCGCTTTGCGCGGC
TCCTCAGCCACCATCCATCTCACAGACCTCCCGGACATTGTGCCCAATCT
GGCCCACAACGCGGCTCTCAACGTCGAATTGCTCAATCGGACGGGCGGTG
CCGTCACAACGGGTGTTCTTGATTGGACCGTTACCCCGGACCCGCTGCCC
ACTGCACAAGAGCAGTACGATCTCATTCTTGCTGCGGATCCGTTGTATTC
GCCTAGTCATCCAAAGTTGCTGGTCGACACGATCACGCATTGGCTGAGTA
GGGGGCTGGATGCCCGTGTTGTGCTGGAAATGCCACTCCGGGATGCGTAT
CTGCCTCAGGTGCAGGAGCTGCGGGATCGGATGGGACGGTTGGGGCTGGC
GGTGGTGGATGAGGGTGAGGAGATTGGCTATGATGATTGGGAGTCGGCGG
ACGGGGGCGCGTTGGAGGTGAAGTGTTGGTGGTCAGTTTGGGGATGGAGC
GAGAAGCTCTAGATGATAAGCGCCGATCCCGACGAGCCTCTCCACGTGTT
CGATCTCCCTCAGATCCACACTAAACCCTCCGGCACTGAGCTCATTCAAG
CTCTCGACCTACTAACAGTCAAACCGCGGAGTTTCGGGCCCGTAGCCCAT
GTAGCGACAAAGGGCCGGACCGTGCAGCCTGCTGGAGTGACCCGCTATCT
GACATCCATCATCGCCAGCCCGCTGGCATGGCTCGACACTGACGAGCTCC
GAGAGGCCGTCTGGGATGCCGCTGCAGCCCGACTTAGCGAGCGCTCCGGT
CGAACCGCCATGCCCGCCATGTCCCGAGTCTTCAGCATCCCTAGTACCAC
ATCCGATGGACTCGAAGTCGAGGAATTTACACTGACCCTCCACGAACCCT
CCCTAACAGCCGACAACCTGGGCATGAAAACCTGGGTCTCCTCATACCTC
CTCTCCCGCCGCCTTCACAACCTCCTCGAATCGCCCCCCAACCTCGTCCC
CTCGACCTGCACCACTCCTCAACTCTGTCCAGACAACAACAAGACCCTCC
GCGCCCTGGAACTCGGCGCCGGAACAGGGCTCGTAGGCCTCTCCTTCGCC
GCTTTGCGCGGCTCCTCAGCCACCATCCATCTCACAGACCTCCCGGACAT
TGTGCCCAATCTGGCCCACAACGCGGCTCTCAACGTCGAATTGCTCAATC
GGACGGGCGGTGCCGTCACAACGGGTGTTCTTGATTGGACCGTTACCCCG
GACCCGCTGCCCACTGCACAAGAGCAGTACGATCTCATTCTTGCTGCGGA
TCCGTTGTATTCGCCTAGTCATCCAAAGTTGCTGGTCGACACGATCACGC
ATTGGCTGAGTAGGGGGCTGGATGCCCGTGTTGTGCTGGAAATGCCACTC
CGGGATGCGTATCTGCCTCAGGTGCAGGAGCTGCGGGATCGGATGGGACG
GTTGGGGCTGGCGGTGGTGGATGAGGGTGAGGAGATTGGCTATGATGATT
GGGAGTCGGCGGACGGGGGCGCGTTGGAGGTGAAGTGTTGGTGGTCAGTT
TGGGGATGGAGCGAGAAGCTCTAGATGATAAGCGCCGATCCCGACGAGCC
TCTCCACGTGTTCGATCTCCCTCAGATCCACACTAAACCCTCCGGCACTG
AGCTCATTCAAGCTCTCGACCTACTAACAGTCAAACCGCGGAGTTTCGGG
CCCGTAGCCCATGTAGCGACAAAGGGCCGGACCGTGCAGCCTGCTGGAGT
GACCCGCTATCTGACATCCATCATCGCCAGCCCGCTGGCATGGCTCGACA
CTGACGAGCTCCGAGAGGCCGTCTGGGATGCCGCTGCAGCCCGACTTAGC
GAGCGCTCCGGTCGAACCGCCATGCCCGCCATGTCCCGAGTCTTCAGCAT
CCCTAGTACCACATCCGATGGACTCGAAGTCGAGGAATTTACACTGACCC
TCCACGAACCCTCCCTAACAGCCGACAACCTGGGCATGAAAACCTGGGTC
TCCTCATACCTCCTCTCCCGCCGCCTTCACAACCTCCTCGAATCGCCCCC
CAACCTCGTCCCCTCGACCTGCACCACTCCTCAACTCTGTCCAGACAACA
ACAAGACCCTCCGCGCCCTGGAACTCGGCGCCGGAACAGGGCTCGTAGGC
CTCTCCTTCGCCGCTTTGCGCGGCTCCTCAGCCACCATCCATCTCACAGA
CCTCCCGGACATTGTGCCCAATCTGGCCCACAACGCGGCTCTCAACGTCG
AATTGCTCAATCGGACGGGCGGTGCCGTCACAACGGGTGTTCTTGATTGG
ACCGTTACCCCGGACCCGCTGCCCACTGCACAAGAGCAGTACGATCTCAT
TCTTGCTGCGGATCCGTTGTATTCGCCTAGTCATCCAAAGTTGCTGGTCG
ACACGATCACGCATTGGCTGAGTAGGGGGCTGGATGCCCGTGTTGTGCTG
GAAATGCCACTCCGGGATGCGTATCTGCCTCAGGTGCAGGAGCTGCGGGA
TCGGATGGGACGGTTGGGGCTGGCGGTGGTGGATGAGGGTGAGGAGATTG
GCTATGATGATTGGGAGTCGGCGGACGGGGGCGCGTTGGAGGTGAAGTGT
TGGTGGTCAGTTTGGGGATGGAGCGAGAAGCTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR019410 |
| DBxref | PFAM:PF10294 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2560942..2562161 + |
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