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CBS51388_000862-T1, CBS51388_000862-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000862-T1
Unique NameCBS51388_000862-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2567143..2569332-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000862-T1 ID=CBS51388_000862-T1|Name=CBS51388_000862-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2190bp|location=Sequence derived from alignment at An01:2567143..2569332- (Aspergillus niger CBS 513.88)
ATGGATGCGTTTAAGTTATTGACAAGGTCCACCAAGTTCAAGGCTGGTAA
TTCCCTGTCTTCGACACTGCCTTCCAAAGGCAAGGCCGAGAACCCCCAGC
TTTTCCGTGACGCAGAGGCCGAAAAGCTTCTGGAGTCAAATGCTTTTGGG
AAAAAGAGAAAGCGCACGCAAGCTGCAGGTGATTCAGATGCAGAAGATGG
CAATGCTGGCGATCTAGATTTCTTCGGTTCAGGTAAACGGTCTGCGGCCA
GTGCCCCATCGAAAAAGGATGAAGATGGACCTTCCGAGCAGAAAGATGCA
TCTGACTCCGAAGGCGATGATTCGATGGATGAAGTTGAGCGCCGGACGAT
CTTGAACTCTCACAAGATCAAGGTCACTGATATGCGTGATTTTGAAGAAC
TTCAGCCCACTCAGCCTCAGAAGGAGGAATCTAAGAAGAAAAAGAAGAAG
AGAAAGCAGCAGGAAGAGGAGCCCGCTCAGACGCTCACTAAGAAGGAGCA
GAAGAAAGCCCGGCGGTTGTTTCCGGAGCCCTTGGTCTCCTTTAAACAGC
TGCGTACGAAGTACAATATTTCCCGACGTCTAGCGGAAAACATTGCTGAG
CAAGGCTTTACGGTCCCTACTGAAGTTCAACTAGGAAGTCTTCCTCTTTT
GCTCGGAGACCAATCAGTGCCGCAGAAGTCGGGCACTGAAAAGAGCACCG
AACCGGATCTACTGGTCGTTGCGCCTACAGGAAGTGGCAAGACGCTATCA
TTTATGATCCCGGTGATCAACAAGATTGTCCGGCACCATCACGAAAAGCC
AGAGGAACGGGGCATCTTGTCTGTTGTAATTGCTCCGACGAAAGAGCTTG
CTAGCCAAATCGTCAACGAAGGCCGAAAGTTAGCTTTGGGAACTGGTGTG
AAGATCACTTTGATGAAGAAGGGCATGCGTGTGGTAGAGCGTGATGATGA
AGACGATAGCAAAGACGTCCTGGATGAAGATGATTCGGAATCGTTGGGCT
CTGAAGATGATGAAAAGGCCACAGCAAAGAACAGCAAAGGGAAGGCGCCG
GTTACCAAGAGCGACATCCTTGTAACAACACCATTGCTTCTTGTTAACGC
GCTTTCTGCAAACCGGACAAAACCGTTGGCGACTCTCCCTCTTGTGAGAA
ATGTGGTTCTGGATGAGGCGGATGTTCTCCTGGATCCTCTGTTCCGCGAC
CAAACACTTGACATCTGGCGCTCCTGCACGCATCCTGAGCTTCGAGCAAG
TCTCTGGTCAGCGACGATGGGGTCAAATGTCGAAGACCTCGCTAAGTCAA
CGATCAAGGAGCGGAAAGATACTCTAAGCGAGACCAAGTCTTATCCGCTA
CTCCGTTTGGTGGTTGGCCTCAAGGACTCTGCTATTCCAAACATCAAGCA
CAAGCTGGTTTATGCTGCCACTGAGCAAGGAAAGTTGCTCGGTCTTCGGC
AGCTTTTGCACCCCGCCGCAGCATCATCAACGGACATTCGTTTACGCCCA
CCTTTCTTGATCTTTACTCAGACGATTCCCAGAGCGGTTGCGTTACATTC
AGAACTGCGCTACGATATCCCTCCCGAGGCGGGTGGCTCGTCACGTATAG
CTGTCCTCCACTCTGAGTTATCGGACGGCCAACGTTCCGAGATCATGAAG
CAATTCCGGAAGGGTGAAATTTGGATTCTGGTCACCACGGATCTTTTGGC
CCGTGGCGTTGACTTCAGAGGCATTAACGGGGTTGTTAACTACGATATCC
CGAACTCCGCTGCTGTCTACGTCCACCGTGTTGGACGGACGGGCAGAGCT
GGCCGTGAAGGTGGCATTGCAGTCACATACTACACCAAGGAGGATATCCC
TTATGTCAAGAGCATTGCCAATGTAATTGACGTCAGCGAGAAGTTACGGG
GGACAGATGAGGAGAAGTCTGTACAGAAGTGGCTGTTGGACGCTCTTCCG
GACCTCAGCAAGAAGAAGAAGGAGGAGCTCAAGAAGCACGGCGTCAAGGC
CAGGCAGACCCAAGGCACCAAAGACGACAAGAAGACAAGAATTAGCACCA
AGAGTGGTTACGAGCGACGCCAGGAGAACAAGAAGAAGGCTCTCATCTCA
GCCAGCCGCAATAGGAAATCTCAACCAAAGTCAGGCGCAGACTCTGGCAG
TGACGACGACAATCAGGGCTGGCAAGGACTCGAGGACTAG
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Coding sequence (CDS) from alignment at An01:2567143..2569332-

>CBS51388_000862-T1 ID=CBS51388_000862-T1|Name=CBS51388_000862-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2190bp|location=Sequence derived from alignment at An01:2567143..2569332- (Aspergillus niger CBS 513.88)
ATGGATGCGTTTAAGTTATTGACAAGGTCCACCAAGTTCAAGGCTGGTAA
TTCCCTGTCTTCGACACTGCCTTCCAAAGGCAAGGCCGAGAACCCCCAGC
TTTTCCGTGACGCAGAGGCCGAAAAGCTTCTGGAGTCAAATGCTTTTGGG
AAAAAGAGAAAGCGCACGCAAGCTGCAGGTGATTCAGATGCAGAAGATGG
CAATGCTGGCGATCTAGATTTCTTCGGTTCAGGTAAACGGTCTGCGGCCA
GTGCCCCATCGAAAAAGGATGAAGATGGACCTTCCGAGCAGAAAGATGCA
TCTGACTCCGAAGGCGATGATTCGATGGATGAAGTTGAGCGCCGGACGAT
CTTGAACTCTCACAAGATCAAGGTCACTGATATGCGTGATTTTGAAGAAC
TTCAGCCCACTCAGCCTCAGAAGGAGGAATCTAAGAAGAAAAAGAAGAAG
AGAAAGCAGCAGGAAGAGGAGCCCGCTCAGACGCTCACTAAGAAGGAGCA
GAAGAAAGCCCGGCGGTTGTTTCCGGAGCCCTTGGTCTCCTTTAAACAGC
TGCGTACGAAGTACAATATTTCCCGACGTCTAGCGGAAAACATTGCTGAG
CAAGGCTTTACGGTCCCTACTGAAGTTCAACTAGGAAGTCTTCCTCTTTT
GCTCGGAGACCAATCAGTGCCGCAGAAGTCGGGCACTGAAAAGAGCACCG
AACCGGATCTACTGGTCGTTGCGCCTACAGGAAGTGGCAAGACGCTATCA
TTTATGATCCCGGTGATCAACAAGATTGTCCGGCACCATCACGAAAAGCC
AGAGGAACGGGGCATCTTGTCTGTTGTAATTGCTCCGACGAAAGAGCTTG
CTAGCCAAATCGTCAACGAAGGCCGAAAGTTAGCTTTGGGAACTGGTGTG
AAGATCACTTTGATGAAGAAGGGCATGCGTGTGGTAGAGCGTGATGATGA
AGACGATAGCAAAGACGTCCTGGATGAAGATGATTCGGAATCGTTGGGCT
CTGAAGATGATGAAAAGGCCACAGCAAAGAACAGCAAAGGGAAGGCGCCG
GTTACCAAGAGCGACATCCTTGTAACAACACCATTGCTTCTTGTTAACGC
GCTTTCTGCAAACCGGACAAAACCGTTGGCGACTCTCCCTCTTGTGAGAA
ATGTGGTTCTGGATGAGGCGGATGTTCTCCTGGATCCTCTGTTCCGCGAC
CAAACACTTGACATCTGGCGCTCCTGCACGCATCCTGAGCTTCGAGCAAG
TCTCTGGTCAGCGACGATGGGGTCAAATGTCGAAGACCTCGCTAAGTCAA
CGATCAAGGAGCGGAAAGATACTCTAAGCGAGACCAAGTCTTATCCGCTA
CTCCGTTTGGTGGTTGGCCTCAAGGACTCTGCTATTCCAAACATCAAGCA
CAAGCTGGTTTATGCTGCCACTGAGCAAGGAAAGTTGCTCGGTCTTCGGC
AGCTTTTGCACCCCGCCGCAGCATCATCAACGGACATTCGTTTACGCCCA
CCTTTCTTGATCTTTACTCAGACGATTCCCAGAGCGGTTGCGTTACATTC
AGAACTGCGCTACGATATCCCTCCCGAGGCGGGTGGCTCGTCACGTATAG
CTGTCCTCCACTCTGAGTTATCGGACGGCCAACGTTCCGAGATCATGAAG
CAATTCCGGAAGGGTGAAATTTGGATTCTGGTCACCACGGATCTTTTGGC
CCGTGGCGTTGACTTCAGAGGCATTAACGGGGTTGTTAACTACGATATCC
CGAACTCCGCTGCTGTCTACGTCCACCGTGTTGGACGGACGGGCAGAGCT
GGCCGTGAAGGTGGCATTGCAGTCACATACTACACCAAGGAGGATATCCC
TTATGTCAAGAGCATTGCCAATGTAATTGACGTCAGCGAGAAGTTACGGG
GGACAGATGAGGAGAAGTCTGTACAGAAGTGGCTGTTGGACGCTCTTCCG
GACCTCAGCAAGAAGAAGAAGGAGGAGCTCAAGAAGCACGGCGTCAAGGC
CAGGCAGACCCAAGGCACCAAAGACGACAAGAAGACAAGAATTAGCACCA
AGAGTGGTTACGAGCGACGCCAGGAGAACAAGAAGAAGGCTCTCATCTCA
GCCAGCCGCAATAGGAAATCTCAACCAAAGTCAGGCGCAGACTCTGGCAG
TGACGACGACAATCAGGGCTGGCAAGGACTCGAGGACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ROK1CBS51388_000862Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000862-T1.cdsCBS51388_000862-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000862-T1.exon1CBS51388_000862-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000862-T1CBS51388_000862-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductRNA-dependent ATPase rok1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2567143..2569332 -
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