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CBS51388_000875-T1, CBS51388_000875-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000875-T1
Unique NameCBS51388_000875-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2600567..2601952-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000875-T1 ID=CBS51388_000875-T1|Name=CBS51388_000875-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1386bp|location=Sequence derived from alignment at An01:2600567..2601952- (Aspergillus niger CBS 513.88)
ATGTACTTCTCCAAGACTGCTGTTGCGTTGGCTGCGGTGCTGCCCTTGGC
CACCGCGCAGACCTACACAGACTGTGACCCTCTCAACAGTATGTTTCTTC
TGTTCATACCCATATTTGTTCAGAGCTAACCGAGTGAACAGAGACCTGCC
CTGCTGATACGGCTTTGAGCTCCACCACCTTCACCACTGATTTCACCACT
GGCTCTTTCAGTGGCTGGATTGCTACCGCCAACAATGTCACCTTTACCGA
TGAGGGTGCCAACTTCGTCATCAGCGAGAAGGGTGAAGCTCCCACCATTG
AGACCGATTTCTACTTCTTTTTCGGCAAGGCCGAGGTTGTCATGAAGGCC
GCCAGTGGTACCGGTATCTGCAGCAGTGTTGTCCTGGAGTCGGATGATCT
CGACGAGATTGACTGGGTAAGCTCTCTAATCCCCTCGGACACATAAATTA
TCATTCGACAGCCCCTATTGCCCCTGCCAACCCTATCATGCACGCTTAGC
TGCACCCTTATCACCCAGTATGCATGGGATAGTAAGCTAACCAGATTGGG
ATATCCAGGAAGCTCTTGGTGGTGACACCACTCAGATTGAGACCAACTAC
TTCGGCAAGGGTGACACATCCTCCTACGACCGTGCTACCTGGGCAACCGT
GTCGACCCCCCAGGAGACCTTCCACACTTACACCGTTGAGTGGACTGAAT
CCGCCACTACCTGGAGCATCGACGGCACTGTTGTGCGCACCCTTGCCTAC
AGCGATGCCCAGAGCGGTACTCGCTACCCCCAGACTCCCATGCGCTTGAA
GCTTGGTATCTGGGCTGCTGGTGACTCCTCTGAGCCCGAGGGTACCATCG
AATGGGCCGGTGGTGAGACTGACTACTCCGACGGTCCCTTCACCATGACT
GTCAAGTCTGTCAGCATCACCAACTATAACCCTGGCTCCTCCTACACCTA
CTCCGACAAGACCGGTGACTACACCAGCATTGTCGTCAACAACGGTACCT
CCAGCTCTAGCGTCAGCTCCACCACCGGCTCGACCTCCAGCTCTACCTCC
AGCTCCACCAGCTCCTCCTCCAGCTCTACCTCCAGCTCCGACTCTACCTC
CAGCTCCGGCTCTACCTCCAGCTCCGGCTCTAGCACCAGCTCTGGCTCCA
GCACTAGCGCTTCCAGCGCCGCTGCCGCCGGCTCCTCCTCTGCCCTCATT
GGATCTGGCTCCAGCACCAGCAGCGGCTCCTCCGCCGCTGGCTCTGGCGC
CGCCTCTGCTTCGGGCTCTGCCTCTGCTTCCTCCAGCGCTAGCGCCAGCG
CCTCCCCCGTCTACACCGGTGCTGCCACCCATGTCGGCGCCTCCACCAGT
GTTCTCTTCGCTGGTCTCCTCGCCGCCCTTTTGTAA
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Coding sequence (CDS) from alignment at An01:2600567..2601952-

>CBS51388_000875-T1 ID=CBS51388_000875-T1|Name=CBS51388_000875-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3573bp|location=Sequence derived from alignment at An01:2600567..2601952- (Aspergillus niger CBS 513.88)
GAAGCTCTTGGTGGTGACACCACTCAGATTGAGACCAACTACTTCGGCAA
GGGTGACACATCCTCCTACGACCGTGCTACCTGGGCAACCGTGTCGACCC
CCCAGGAGACCTTCCACACTTACACCGTTGAGTGGACTGAATCCGCCACT
ACCTGGAGCATCGACGGCACTGTTGTGCGCACCCTTGCCTACAGCGATGC
CCAGAGCGGTACTCGCTACCCCCAGACTCCCATGCGCTTGAAGCTTGGTA
TCTGGGCTGCTGGTGACTCCTCTGAGCCCGAGGGTACCATCGAATGGGCC
GGTGGTGAGACTGACTACTCCGACGGTCCCTTCACCATGACTGTCAAGTC
TGTCAGCATCACCAACTATAACCCTGGCTCCTCCTACACCTACTCCGACA
AGACCGGTGACTACACCAGCATTGTCGTCAACAACGGTACCTCCAGCTCT
AGCGTCAGCTCCACCACCGGCTCGACCTCCAGCTCTACCTCCAGCTCCAC
CAGCTCCTCCTCCAGCTCTACCTCCAGCTCCGACTCTACCTCCAGCTCCG
GCTCTACCTCCAGCTCCGGCTCTAGCACCAGCTCTGGCTCCAGCACTAGC
GCTTCCAGCGCCGCTGCCGCCGGCTCCTCCTCTGCCCTCATTGGATCTGG
CTCCAGCACCAGCAGCGGCTCCTCCGCCGCTGGCTCTGGCGCCGCCTCTG
CTTCGGGCTCTGCCTCTGCTTCCTCCAGCGCTAGCGCCAGCGCCTCCCCC
GTCTACACCGGTGCTGCCACCCATGTCGGCGCCTCCACCAGTGTTCTCTT
CGCTGGTCTCCTCGCCGCCCTTTTGTAAAGACCTGCCCTGCTGATACGGC
TTTGAGCTCCACCACCTTCACCACTGATTTCACCACTGGCTCTTTCAGTG
GCTGGATTGCTACCGCCAACAATGTCACCTTTACCGATGAGGGTGCCAAC
TTCGTCATCAGCGAGAAGGGTGAAGCTCCCACCATTGAGACCGATTTCTA
CTTCTTTTTCGGCAAGGCCGAGGTTGTCATGAAGGCCGCCAGTGGTACCG
GTATCTGCAGCAGTGTTGTCCTGGAGTCGGATGATCTCGACGAGATTGAC
TGGATGTACTTCTCCAAGACTGCTGTTGCGTTGGCTGCGGTGCTGCCCTT
GGCCACCGCGCAGACCTACACAGACTGTGACCCTCTCAACAGAAGCTCTT
GGTGGTGACACCACTCAGATTGAGACCAACTACTTCGGCAAGGGTGACAC
ATCCTCCTACGACCGTGCTACCTGGGCAACCGTGTCGACCCCCCAGGAGA
CCTTCCACACTTACACCGTTGAGTGGACTGAATCCGCCACTACCTGGAGC
ATCGACGGCACTGTTGTGCGCACCCTTGCCTACAGCGATGCCCAGAGCGG
TACTCGCTACCCCCAGACTCCCATGCGCTTGAAGCTTGGTATCTGGGCTG
CTGGTGACTCCTCTGAGCCCGAGGGTACCATCGAATGGGCCGGTGGTGAG
ACTGACTACTCCGACGGTCCCTTCACCATGACTGTCAAGTCTGTCAGCAT
CACCAACTATAACCCTGGCTCCTCCTACACCTACTCCGACAAGACCGGTG
ACTACACCAGCATTGTCGTCAACAACGGTACCTCCAGCTCTAGCGTCAGC
TCCACCACCGGCTCGACCTCCAGCTCTACCTCCAGCTCCACCAGCTCCTC
CTCCAGCTCTACCTCCAGCTCCGACTCTACCTCCAGCTCCGGCTCTACCT
CCAGCTCCGGCTCTAGCACCAGCTCTGGCTCCAGCACTAGCGCTTCCAGC
GCCGCTGCCGCCGGCTCCTCCTCTGCCCTCATTGGATCTGGCTCCAGCAC
CAGCAGCGGCTCCTCCGCCGCTGGCTCTGGCGCCGCCTCTGCTTCGGGCT
CTGCCTCTGCTTCCTCCAGCGCTAGCGCCAGCGCCTCCCCCGTCTACACC
GGTGCTGCCACCCATGTCGGCGCCTCCACCAGTGTTCTCTTCGCTGGTCT
CCTCGCCGCCCTTTTGTAAAGACCTGCCCTGCTGATACGGCTTTGAGCTC
CACCACCTTCACCACTGATTTCACCACTGGCTCTTTCAGTGGCTGGATTG
CTACCGCCAACAATGTCACCTTTACCGATGAGGGTGCCAACTTCGTCATC
AGCGAGAAGGGTGAAGCTCCCACCATTGAGACCGATTTCTACTTCTTTTT
CGGCAAGGCCGAGGTTGTCATGAAGGCCGCCAGTGGTACCGGTATCTGCA
GCAGTGTTGTCCTGGAGTCGGATGATCTCGACGAGATTGACTGGATGTAC
TTCTCCAAGACTGCTGTTGCGTTGGCTGCGGTGCTGCCCTTGGCCACCGC
GCAGACCTACACAGACTGTGACCCTCTCAACAGAAGCTCTTGGTGGTGAC
ACCACTCAGATTGAGACCAACTACTTCGGCAAGGGTGACACATCCTCCTA
CGACCGTGCTACCTGGGCAACCGTGTCGACCCCCCAGGAGACCTTCCACA
CTTACACCGTTGAGTGGACTGAATCCGCCACTACCTGGAGCATCGACGGC
ACTGTTGTGCGCACCCTTGCCTACAGCGATGCCCAGAGCGGTACTCGCTA
CCCCCAGACTCCCATGCGCTTGAAGCTTGGTATCTGGGCTGCTGGTGACT
CCTCTGAGCCCGAGGGTACCATCGAATGGGCCGGTGGTGAGACTGACTAC
TCCGACGGTCCCTTCACCATGACTGTCAAGTCTGTCAGCATCACCAACTA
TAACCCTGGCTCCTCCTACACCTACTCCGACAAGACCGGTGACTACACCA
GCATTGTCGTCAACAACGGTACCTCCAGCTCTAGCGTCAGCTCCACCACC
GGCTCGACCTCCAGCTCTACCTCCAGCTCCACCAGCTCCTCCTCCAGCTC
TACCTCCAGCTCCGACTCTACCTCCAGCTCCGGCTCTACCTCCAGCTCCG
GCTCTAGCACCAGCTCTGGCTCCAGCACTAGCGCTTCCAGCGCCGCTGCC
GCCGGCTCCTCCTCTGCCCTCATTGGATCTGGCTCCAGCACCAGCAGCGG
CTCCTCCGCCGCTGGCTCTGGCGCCGCCTCTGCTTCGGGCTCTGCCTCTG
CTTCCTCCAGCGCTAGCGCCAGCGCCTCCCCCGTCTACACCGGTGCTGCC
ACCCATGTCGGCGCCTCCACCAGTGTTCTCTTCGCTGGTCTCCTCGCCGC
CCTTTTGTAAAGACCTGCCCTGCTGATACGGCTTTGAGCTCCACCACCTT
CACCACTGATTTCACCACTGGCTCTTTCAGTGGCTGGATTGCTACCGCCA
ACAATGTCACCTTTACCGATGAGGGTGCCAACTTCGTCATCAGCGAGAAG
GGTGAAGCTCCCACCATTGAGACCGATTTCTACTTCTTTTTCGGCAAGGC
CGAGGTTGTCATGAAGGCCGCCAGTGGTACCGGTATCTGCAGCAGTGTTG
TCCTGGAGTCGGATGATCTCGACGAGATTGACTGGATGTACTTCTCCAAG
ACTGCTGTTGCGTTGGCTGCGGTGCTGCCCTTGGCCACCGCGCAGACCTA
CACAGACTGTGACCCTCTCAACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0071555cell wall organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRF1CBS51388_000875Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000875-T1CBS51388_000875-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000875-T1.cdsCBS51388_000875-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000875-T1.exon3CBS51388_000875-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_000875-T1.exon2CBS51388_000875-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000875-T1.exon1CBS51388_000875-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH16
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR000757
DBxrefInterPro:IPR017168
DBxrefPFAM:PF00722
Productcopper resistance protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2600567..2601952 -
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