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CBS51388_000901-T1, CBS51388_000901-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000901-T1
Unique NameCBS51388_000901-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2661733..2663060+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000901-T1 ID=CBS51388_000901-T1|Name=CBS51388_000901-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1328bp|location=Sequence derived from alignment at An01:2661733..2663060+ (Aspergillus niger CBS 513.88)
ATGTTCGGTGCATTTCGCTGCAACAACAGTACATCTAAGAATCTGGAATT
CATTGATTTATCGAGAAAGGTCGGTATGGATTCTCGGAATTCTGCTGTAC
TGGTAGGTGATCTATTCGTTTATATGGACGACATTGGCGATGCTAACATG
TGGTCATCAGGCATGTGAACCCTGCCGAGCTCAAAAGGTCAGTCAGCCAG
CAATCAGACCGTGGGTATATTGCTGGACTAACAGTTGTGAAGCTCAAATG
CAATGGTGATCTGTATGGATGCGAAAGATGCCAAGAGTCATCTACCGATT
GCACGTATCGCACCCCTACGCCCACATCCTCCACGCCTTTGAGCTTGAAA
CATCCCGCATCAGATCTTCCGGCACCTCCCATAAAGCGGCGGAGGACAAA
TGGCGTTGGAGCTCTGCGTATACATTGTCCGTCGCCAGTTGGACCCAGCC
CCAGAATACAGTCACCAGTCGTGGCGCCCGAGCCAGTCTTCATCAATTCA
TACCAAGACTGGGGACAATTCTGCAACATGAACACAACGGAACACCCAGG
GTTGAACTTAACTCTAGACGATAATATGCCCTGTTACCCAACGGCGCCTT
TGATCTCAGAGGCACATCTGAGGCCCTCCCATTTGGTGTCGCCAGCTGCA
TCACATTCGAGTGAAAGCGGTCTTAGTGTCTTTGTTCGGAACCCTCATAC
GCCTGTCACTTCGCAAGGCCCATTTGAGCATCAGGGCCAACCTTGCAAGT
GCATTCAGTCCCTTGCCGACACGCTGGAGAAGGTTGGAGGTGACAACGAC
CAAAGGAGTACTATCGACCACAGTGAACGTCTTGATTACCTGCTCATGTC
TTTGCACACCGGTGTTGATACATGTACTCGCGTACTTGACTGCGCCAACT
GCGACATCTGTGCCACAAACTCAATGATCCTAATGGCTTTGATTCAACAG
CTTGCCATAAGGTCGAGTGACCTTTGCGACCTACTTCTCTCGCTCCAGGA
TAAGCCTCAGAGGACCTTGCCAGACGACCCAGCAGATCTCGAGCAGGAAG
CTAGCGTCTTTATAGGAAGGTACCAAATACAAATCGAGGCTGTGTGTAGG
GAGCTTGTCCACACTTTAGCCAACATCCACTTCAGAGACCTTCGTCGGCT
GCTAGCCCGTCTTGCTGATTTGATTGGGAAGAAGCCAAGAGCAAATAAGA
TGCTTACGGAAGCCACTGAGACTTCGGAGAAGGCGTCTCACATACTTGAA
GGGATTTTGGTCAAGCGTGCGGCTGACAAGGCAAAGAACCACGAGCTGTA
CGGCTTGATTACGCAGAGGGGTCCTTAA
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Coding sequence (CDS) from alignment at An01:2661733..2663060+

>CBS51388_000901-T1 ID=CBS51388_000901-T1|Name=CBS51388_000901-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3645bp|location=Sequence derived from alignment at An01:2661733..2663060+ (Aspergillus niger CBS 513.88)
ATGTTCGGTGCATTTCGCTGCAACAACAGTACATCTAAGAATCTGGAATT
CATTGATTTATCGAGAAAGGTCGGTATGGATTCTCGGAATTCTGCTGTAC
TGGCATGTGAACCCTGCCGAGCTCAAAAGCTCAAATGCAATGGTGATCTG
TATGGATGCGAAAGATGCCAAGAGTCATCTACCGATTGCACGTATCGCAC
CCCTACGCCCACATCCTCCACGCCTTTGAGCTTGAAACATCCCGCATCAG
ATCTTCCGGCACCTCCCATAAAGCGGCGGAGGACAAATGGCGTTGGAGCT
CTGCGTATACATTGTCCGTCGCCAGTTGGACCCAGCCCCAGAATACAGTC
ACCAGTCGTGGCGCCCGAGCCAGTCTTCATCAATTCATACCAAGACTGGG
GACAATTCTGCAACATGAACACAACGGAACACCCAGGGTTGAACTTAACT
CTAGACGATAATATGCCCTGTTACCCAACGGCGCCTTTGATCTCAGAGGC
ACATCTGAGGCCCTCCCATTTGGTGTCGCCAGCTGCATCACATTCGAGTG
AAAGCGGTCTTAGTGTCTTTGTTCGGAACCCTCATACGCCTGTCACTTCG
CAAGGCCCATTTGAGCATCAGGGCCAACCTTGCAAGTGCATTCAGTCCCT
TGCCGACACGCTGGAGAAGGTTGGAGGTGACAACGACCAAAGGAGTACTA
TCGACCACAGTGAACGTCTTGATTACCTGCTCATGTCTTTGCACACCGGT
GTTGATACATGTACTCGCGTACTTGACTGCGCCAACTGCGACATCTGTGC
CACAAACTCAATGATCCTAATGGCTTTGATTCAACAGCTTGCCATAAGGT
CGAGTGACCTTTGCGACCTACTTCTCTCGCTCCAGGATAAGCCTCAGAGG
ACCTTGCCAGACGACCCAGCAGATCTCGAGCAGGAAGCTAGCGTCTTTAT
AGGAAGGTACCAAATACAAATCGAGGCTGTGTGTAGGGAGCTTGTCCACA
CTTTAGCCAACATCCACTTCAGAGACCTTCGTCGGCTGCTAGCCCGTCTT
GCTGATTTGATTGGGAAGAAGCCAAGAGCAAATAAGATGCTTACGGAAGC
CACTGAGACTTCGGAGAAGGCGTCTCACATACTTGAAGGGATTTTGGTCA
AGCGTGCGGCTGACAAGGCAAAGAACCACGAGCTGTACGGCTTGATTACG
CAGAGGGGTCCTTAAATGTTCGGTGCATTTCGCTGCAACAACAGTACATC
TAAGAATCTGGAATTCATTGATTTATCGAGAAAGGTCGGTATGGATTCTC
GGAATTCTGCTGTACTGGCATGTGAACCCTGCCGAGCTCAAAAGCTCAAA
TGCAATGGTGATCTGTATGGATGCGAAAGATGCCAAGAGTCATCTACCGA
TTGCACGTATCGCACCCCTACGCCCACATCCTCCACGCCTTTGAGCTTGA
AACATCCCGCATCAGATCTTCCGGCACCTCCCATAAAGCGGCGGAGGACA
AATGGCGTTGGAGCTCTGCGTATACATTGTCCGTCGCCAGTTGGACCCAG
CCCCAGAATACAGTCACCAGTCGTGGCGCCCGAGCCAGTCTTCATCAATT
CATACCAAGACTGGGGACAATTCTGCAACATGAACACAACGGAACACCCA
GGGTTGAACTTAACTCTAGACGATAATATGCCCTGTTACCCAACGGCGCC
TTTGATCTCAGAGGCACATCTGAGGCCCTCCCATTTGGTGTCGCCAGCTG
CATCACATTCGAGTGAAAGCGGTCTTAGTGTCTTTGTTCGGAACCCTCAT
ACGCCTGTCACTTCGCAAGGCCCATTTGAGCATCAGGGCCAACCTTGCAA
GTGCATTCAGTCCCTTGCCGACACGCTGGAGAAGGTTGGAGGTGACAACG
ACCAAAGGAGTACTATCGACCACAGTGAACGTCTTGATTACCTGCTCATG
TCTTTGCACACCGGTGTTGATACATGTACTCGCGTACTTGACTGCGCCAA
CTGCGACATCTGTGCCACAAACTCAATGATCCTAATGGCTTTGATTCAAC
AGCTTGCCATAAGGTCGAGTGACCTTTGCGACCTACTTCTCTCGCTCCAG
GATAAGCCTCAGAGGACCTTGCCAGACGACCCAGCAGATCTCGAGCAGGA
AGCTAGCGTCTTTATAGGAAGGTACCAAATACAAATCGAGGCTGTGTGTA
GGGAGCTTGTCCACACTTTAGCCAACATCCACTTCAGAGACCTTCGTCGG
CTGCTAGCCCGTCTTGCTGATTTGATTGGGAAGAAGCCAAGAGCAAATAA
GATGCTTACGGAAGCCACTGAGACTTCGGAGAAGGCGTCTCACATACTTG
AAGGGATTTTGGTCAAGCGTGCGGCTGACAAGGCAAAGAACCACGAGCTG
TACGGCTTGATTACGCAGAGGGGTCCTTAAATGTTCGGTGCATTTCGCTG
CAACAACAGTACATCTAAGAATCTGGAATTCATTGATTTATCGAGAAAGG
TCGGTATGGATTCTCGGAATTCTGCTGTACTGGCATGTGAACCCTGCCGA
GCTCAAAAGCTCAAATGCAATGGTGATCTGTATGGATGCGAAAGATGCCA
AGAGTCATCTACCGATTGCACGTATCGCACCCCTACGCCCACATCCTCCA
CGCCTTTGAGCTTGAAACATCCCGCATCAGATCTTCCGGCACCTCCCATA
AAGCGGCGGAGGACAAATGGCGTTGGAGCTCTGCGTATACATTGTCCGTC
GCCAGTTGGACCCAGCCCCAGAATACAGTCACCAGTCGTGGCGCCCGAGC
CAGTCTTCATCAATTCATACCAAGACTGGGGACAATTCTGCAACATGAAC
ACAACGGAACACCCAGGGTTGAACTTAACTCTAGACGATAATATGCCCTG
TTACCCAACGGCGCCTTTGATCTCAGAGGCACATCTGAGGCCCTCCCATT
TGGTGTCGCCAGCTGCATCACATTCGAGTGAAAGCGGTCTTAGTGTCTTT
GTTCGGAACCCTCATACGCCTGTCACTTCGCAAGGCCCATTTGAGCATCA
GGGCCAACCTTGCAAGTGCATTCAGTCCCTTGCCGACACGCTGGAGAAGG
TTGGAGGTGACAACGACCAAAGGAGTACTATCGACCACAGTGAACGTCTT
GATTACCTGCTCATGTCTTTGCACACCGGTGTTGATACATGTACTCGCGT
ACTTGACTGCGCCAACTGCGACATCTGTGCCACAAACTCAATGATCCTAA
TGGCTTTGATTCAACAGCTTGCCATAAGGTCGAGTGACCTTTGCGACCTA
CTTCTCTCGCTCCAGGATAAGCCTCAGAGGACCTTGCCAGACGACCCAGC
AGATCTCGAGCAGGAAGCTAGCGTCTTTATAGGAAGGTACCAAATACAAA
TCGAGGCTGTGTGTAGGGAGCTTGTCCACACTTTAGCCAACATCCACTTC
AGAGACCTTCGTCGGCTGCTAGCCCGTCTTGCTGATTTGATTGGGAAGAA
GCCAAGAGCAAATAAGATGCTTACGGAAGCCACTGAGACTTCGGAGAAGG
CGTCTCACATACTTGAAGGGATTTTGGTCAAGCGTGCGGCTGACAAGGCA
AAGAACCACGAGCTGTACGGCTTGATTACGCAGAGGGGTCCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000901CBS51388_000901Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000901-T1.exon1CBS51388_000901-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000901-T1.exon2CBS51388_000901-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000901-T1.exon3CBS51388_000901-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000901-T1.cdsCBS51388_000901-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000901-T1CBS51388_000901-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2661733..2663060 +
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