|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2674688..2675704- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000907-T1 ID=CBS51388_000907-T1|Name=CBS51388_000907-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1017bp|location=Sequence derived from alignment at An01:2674688..2675704- (Aspergillus niger CBS 513.88)
ATGAATACCCCCACCATCGGAGTCTTCCCAGCTGCAGGAGGTATTGGCGG
GAGCACCGTCAAGCATCTCTTGCCACGTCTTCCATCTAAGAAGCTTGTGT
TTATCGCTCGGAGTCCTGAAAAACTCAGGAGCTTGCCCGTGGACCAAGCT
GTTCTCCGGCAGGCTGACTACGACGACGACGAGAGCTTGAAGGTTGCATT
CGAGGGGCTGAACATACTCTTCCTAATCTCCTACGCGTCTGTGGAGCATG
AATATCGAACTGAGGTAAGACTTAACCCCCCCTTATGTGGAAGCATCCAG
TCCGAAACACATGCTGACCGCGATATGCTTGGGGGATAGCGACACCGCAC
TGCCATCGACCATGCGATTCGCATGGGTGTGACACATATCTTCTACGGGT
CGCTAGGCTACGGTGGGAACCCCGAAGGTGATAAGTCGGTGGCACACGTC
ATGCAGGCGCACTTGGACACCGAAAGATACCTGGAGGAATGCACGCGGCA
GCATGTGGGTTTCTCCTACACGGTCATCCGCGAAGGTCTCTACTCCGAGT
CGTACCCGCTCTATACCGCTTTCTTTGATCCGAAGCAGCCCGTCGACGAG
ATCAAGATCCCCCACGATGGTGCGGGCCAGGGGATCGCGTGGGTGAAGCG
TGAGGAACTTGGGGAAGGGTCCGCAGAGCTCATCAAGAGATTCGTGCAGG
ACCCGAACGGGTTTCCCTATCGCAATCGCAAAGTGCTCTTGTCCGGCCCG
CGAACCCTGACCCTCGGGGAAACGGTTGCCATTCTGGCCAAGCTCGCCAA
TCATACGGTGCGCATTCGCCAGGTCTCCGTGGATGAATTCGCCAGACAAC
CTCAGGTTTCTTCCAACTTCACTTACCATGGCGTGGATCATTCGAAGTTG
TGGACCTCCACCTTTGAGGCCTTTCGCCGAGGAGAAGGCGCTTTCGTGTC
CCCTTTGCTAGGCGAGCTCCTGGGACGCGAGCCGGAGGACTTTGAGACTA
CCGTGTCCCGGTCTTGA back to topCoding sequence (CDS) from alignment at An01:2674688..2675704- >CBS51388_000907-T1 ID=CBS51388_000907-T1|Name=CBS51388_000907-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1884bp|location=Sequence derived from alignment at An01:2674688..2675704- (Aspergillus niger CBS 513.88)
CGACACCGCACTGCCATCGACCATGCGATTCGCATGGGTGTGACACATAT
CTTCTACGGGTCGCTAGGCTACGGTGGGAACCCCGAAGGTGATAAGTCGG
TGGCACACGTCATGCAGGCGCACTTGGACACCGAAAGATACCTGGAGGAA
TGCACGCGGCAGCATGTGGGTTTCTCCTACACGGTCATCCGCGAAGGTCT
CTACTCCGAGTCGTACCCGCTCTATACCGCTTTCTTTGATCCGAAGCAGC
CCGTCGACGAGATCAAGATCCCCCACGATGGTGCGGGCCAGGGGATCGCG
TGGGTGAAGCGTGAGGAACTTGGGGAAGGGTCCGCAGAGCTCATCAAGAG
ATTCGTGCAGGACCCGAACGGGTTTCCCTATCGCAATCGCAAAGTGCTCT
TGTCCGGCCCGCGAACCCTGACCCTCGGGGAAACGGTTGCCATTCTGGCC
AAGCTCGCCAATCATACGGTGCGCATTCGCCAGGTCTCCGTGGATGAATT
CGCCAGACAACCTCAGGTTTCTTCCAACTTCACTTACCATGGCGTGGATC
ATTCGAAGTTGTGGACCTCCACCTTTGAGGCCTTTCGCCGAGGAGAAGGC
GCTTTCGTGTCCCCTTTGCTAGGCGAGCTCCTGGGACGCGAGCCGGAGGA
CTTTGAGACTACCGTGTCCCGGTCTTGAATGAATACCCCCACCATCGGAG
TCTTCCCAGCTGCAGGAGGTATTGGCGGGAGCACCGTCAAGCATCTCTTG
CCACGTCTTCCATCTAAGAAGCTTGTGTTTATCGCTCGGAGTCCTGAAAA
ACTCAGGAGCTTGCCCGTGGACCAAGCTGTTCTCCGGCAGGCTGACTACG
ACGACGACGAGAGCTTGAAGGTTGCATTCGAGGGGCTGAACATACTCTTC
CTAATCTCCTACGCGTCTGTGGAGCATGAATATCGAACTGAGCGACACCG
CACTGCCATCGACCATGCGATTCGCATGGGTGTGACACATATCTTCTACG
GGTCGCTAGGCTACGGTGGGAACCCCGAAGGTGATAAGTCGGTGGCACAC
GTCATGCAGGCGCACTTGGACACCGAAAGATACCTGGAGGAATGCACGCG
GCAGCATGTGGGTTTCTCCTACACGGTCATCCGCGAAGGTCTCTACTCCG
AGTCGTACCCGCTCTATACCGCTTTCTTTGATCCGAAGCAGCCCGTCGAC
GAGATCAAGATCCCCCACGATGGTGCGGGCCAGGGGATCGCGTGGGTGAA
GCGTGAGGAACTTGGGGAAGGGTCCGCAGAGCTCATCAAGAGATTCGTGC
AGGACCCGAACGGGTTTCCCTATCGCAATCGCAAAGTGCTCTTGTCCGGC
CCGCGAACCCTGACCCTCGGGGAAACGGTTGCCATTCTGGCCAAGCTCGC
CAATCATACGGTGCGCATTCGCCAGGTCTCCGTGGATGAATTCGCCAGAC
AACCTCAGGTTTCTTCCAACTTCACTTACCATGGCGTGGATCATTCGAAG
TTGTGGACCTCCACCTTTGAGGCCTTTCGCCGAGGAGAAGGCGCTTTCGT
GTCCCCTTTGCTAGGCGAGCTCCTGGGACGCGAGCCGGAGGACTTTGAGA
CTACCGTGTCCCGGTCTTGAATGAATACCCCCACCATCGGAGTCTTCCCA
GCTGCAGGAGGTATTGGCGGGAGCACCGTCAAGCATCTCTTGCCACGTCT
TCCATCTAAGAAGCTTGTGTTTATCGCTCGGAGTCCTGAAAAACTCAGGA
GCTTGCCCGTGGACCAAGCTGTTCTCCGGCAGGCTGACTACGACGACGAC
GAGAGCTTGAAGGTTGCATTCGAGGGGCTGAACATACTCTTCCTAATCTC
CTACGCGTCTGTGGAGCATGAATATCGAACTGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2674688..2675704 - |
|
