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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2743874..2745337+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000936-T1 ID=CBS51388_000936-T1|Name=CBS51388_000936-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1464bp|location=Sequence derived from alignment at An01:2743874..2745337+ (Aspergillus niger CBS 513.88)
ATGAAGACTCTCTCCCTTGCCGCTGTCTTGCTCGTCCAAGCCTGGACTGC
GAACAGCAGTCCGAGGGCTAAGCGGTCGTCTGGTTTCCAATGTACCTCTT
CCTTCTTCACTACCTATTTGAAAGACACATATTGATAAGTGAACAGGGTT
CGGTAGCAACGAATCCGGCGCCGAATTTGGCTCCGGGAATATCCCCGGCA
CTTTGGGCACGGATTACATCTGGCCTGATGCGACGGCTATCGCGACGCTG
CATAGTGCTGGGATGAATATCTTCCGCGTGCCGTTCCTGATGGAGCGGTT
GGTGCCGGATGAGTTGACTGGTGCGGCGGATGCGACGTATATGGCTGATC
TGAAGGCTGTAAGTTCCCCTTATCAGGATATGATGCACTGTGTCTGATGA
CGATGGTGGTGACGATGTAGACGGTGCAAACCATCACAGACCTTGGTGCT
TATGCGGTGGTGGATCCGCATAATTTTGGGAGATAGTATGTGCTTCCTTC
CCTTCCTTCACCTTCCTGTGGTATGGAACTAATGTGATACTATCCAGCTA
CGGTAACATCATCACCTCAACCAGCGACTTTGCAGCCTTCTGGACAACAG
TCGCCAGCGAGTTCACCGACAATGACCTTGTCATCTTCGATACCAGTACG
TACCCTACCTCCCCCCAATCTTTTACATACTAACATGATGCAAATAGACA
ACGAATTCCACGACGAAGACCAAACCCTCGTGCTCGATCTCAATCAAGCC
GCCATCACCGCCATCCGCGCCACCGCTGCCACAACGCAATATATCTTCGT
CGAAGGCAATTCCTACACCGGCGCCTGGACCTGGACCACCACCAACACGA
ACCTCGTCAACCTGACCGACCCCAACGACCATCTCATCTACGAAATGCAC
CAGTACCTGGACAGCGATGGCTCCGGGACGAGTTCGACGTGCGTCAGCTC
GACAATTGGTGCGGAGCGCATTGCTGATGCCACAACCTGGTTGAAAGAGA
ATGGCAAGCAGGCGGTGCTGGGGGAGTTCGCGGGCGGCGCGAATAGTGTA
TGTGAGGAGGCGGTTACAGGCATGTTGGATGCGATGGTGGATGCTAGTGA
TGTTTGGCTGGGGGGCATGTGGTGGTCTGCTGGGCCTTGGTGGGGGGATT
ATATCTTCTCGTTGGAGCCCGATGATGGAATTGCTTATGAGTATTATTTG
GGGGTGTTGGAGGGGTATACGCCTGGTTCATCTTCGGGATCATCTGGAGG
GAGTACAACAAGTGCCGTGGCGAGTGCTAGTAGTACGTCGTCTGCTGGGA
GTACTACGAGCAAAGTGACTACTACTACTGCTGCGACTGCTACATCGACG
GCTGTAGCTGCGCACTATGCTCAGTGTGGTGGGGAGGGCTGGACTGGGGC
GACGACTTGTGCGGATGGATATACCTGCACAGTAGAAAATGAGTGGTATT
CGCAGTGTTTGTAG back to topCoding sequence (CDS) from alignment at An01:2743874..2745337+ >CBS51388_000936-T1 ID=CBS51388_000936-T1|Name=CBS51388_000936-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6165bp|location=Sequence derived from alignment at An01:2743874..2745337+ (Aspergillus niger CBS 513.88)
ATGAAGACTCTCTCCCTTGCCGCTGTCTTGCTCGTCCAAGCCTGGACTGC
GAACAGCAGTCCGAGGGCTAAGCGGTCGTCTGGTTTCCAATGGTTCGGTA
GCAACGAATCCGGCGCCGAATTTGGCTCCGGGAATATCCCCGGCACTTTG
GGCACGGATTACATCTGGCCTGATGCGACGGCTATCGCGACGCTGCATAG
TGCTGGGATGAATATCTTCCGCGTGCCGTTCCTGATGGAGCGGTTGGTGC
CGGATGAGTTGACTGGTGCGGCGGATGCGACGTATATGGCTGATCTGAAG
GCTACGGTGCAAACCATCACAGACCTTGGTGCTTATGCGGTGGTGGATCC
GCATAATTTTGGGAGATACTACGGTAACATCATCACCTCAACCAGCGACT
TTGCAGCCTTCTGGACAACAGTCGCCAGCGAGTTCACCGACAATGACCTT
GTCATCTTCGATACCAACAACGAATTCCACGACGAAGACCAAACCCTCGT
GCTCGATCTCAATCAAGCCGCCATCACCGCCATCCGCGCCACCGCTGCCA
CAACGCAATATATCTTCGTCGAAGGCAATTCCTACACCGGCGCCTGGACC
TGGACCACCACCAACACGAACCTCGTCAACCTGACCGACCCCAACGACCA
TCTCATCTACGAAATGCACCAGTACCTGGACAGCGATGGCTCCGGGACGA
GTTCGACGTGCGTCAGCTCGACAATTGGTGCGGAGCGCATTGCTGATGCC
ACAACCTGGTTGAAAGAGAATGGCAAGCAGGCGGTGCTGGGGGAGTTCGC
GGGCGGCGCGAATAGTGTATGTGAGGAGGCGGTTACAGGCATGTTGGATG
CGATGGTGGATGCTAGTGATGTTTGGCTGGGGGGCATGTGGTGGTCTGCT
GGGCCTTGGTGGGGGGATTATATCTTCTCGTTGGAGCCCGATGATGGAAT
TGCTTATGAGTATTATTTGGGGGTGTTGGAGGGGTATACGCCTGGTTCAT
CTTCGGGATCATCTGGAGGGAGTACAACAAGTGCCGTGGCGAGTGCTAGT
AGTACGTCGTCTGCTGGGAGTACTACGAGCAAAGTGACTACTACTACTGC
TGCGACTGCTACATCGACGGCTGTAGCTGCGCACTATGCTCAGTGTGGTG
GGGAGGGCTGGACTGGGGCGACGACTTGTGCGGATGGATATACCTGCACA
GTAGAAAATGAGTGGTATTCGCAGTGTTTGTAGATGAAGACTCTCTCCCT
TGCCGCTGTCTTGCTCGTCCAAGCCTGGACTGCGAACAGCAGTCCGAGGG
CTAAGCGGTCGTCTGGTTTCCAATGGTTCGGTAGCAACGAATCCGGCGCC
GAATTTGGCTCCGGGAATATCCCCGGCACTTTGGGCACGGATTACATCTG
GCCTGATGCGACGGCTATCGCGACGCTGCATAGTGCTGGGATGAATATCT
TCCGCGTGCCGTTCCTGATGGAGCGGTTGGTGCCGGATGAGTTGACTGGT
GCGGCGGATGCGACGTATATGGCTGATCTGAAGGCTACGGTGCAAACCAT
CACAGACCTTGGTGCTTATGCGGTGGTGGATCCGCATAATTTTGGGAGAT
ACTACGGTAACATCATCACCTCAACCAGCGACTTTGCAGCCTTCTGGACA
ACAGTCGCCAGCGAGTTCACCGACAATGACCTTGTCATCTTCGATACCAA
CAACGAATTCCACGACGAAGACCAAACCCTCGTGCTCGATCTCAATCAAG
CCGCCATCACCGCCATCCGCGCCACCGCTGCCACAACGCAATATATCTTC
GTCGAAGGCAATTCCTACACCGGCGCCTGGACCTGGACCACCACCAACAC
GAACCTCGTCAACCTGACCGACCCCAACGACCATCTCATCTACGAAATGC
ACCAGTACCTGGACAGCGATGGCTCCGGGACGAGTTCGACGTGCGTCAGC
TCGACAATTGGTGCGGAGCGCATTGCTGATGCCACAACCTGGTTGAAAGA
GAATGGCAAGCAGGCGGTGCTGGGGGAGTTCGCGGGCGGCGCGAATAGTG
TATGTGAGGAGGCGGTTACAGGCATGTTGGATGCGATGGTGGATGCTAGT
GATGTTTGGCTGGGGGGCATGTGGTGGTCTGCTGGGCCTTGGTGGGGGGA
TTATATCTTCTCGTTGGAGCCCGATGATGGAATTGCTTATGAGTATTATT
TGGGGGTGTTGGAGGGGTATACGCCTGGTTCATCTTCGGGATCATCTGGA
GGGAGTACAACAAGTGCCGTGGCGAGTGCTAGTAGTACGTCGTCTGCTGG
GAGTACTACGAGCAAAGTGACTACTACTACTGCTGCGACTGCTACATCGA
CGGCTGTAGCTGCGCACTATGCTCAGTGTGGTGGGGAGGGCTGGACTGGG
GCGACGACTTGTGCGGATGGATATACCTGCACAGTAGAAAATGAGTGGTA
TTCGCAGTGTTTGTAGATGAAGACTCTCTCCCTTGCCGCTGTCTTGCTCG
TCCAAGCCTGGACTGCGAACAGCAGTCCGAGGGCTAAGCGGTCGTCTGGT
TTCCAATGGTTCGGTAGCAACGAATCCGGCGCCGAATTTGGCTCCGGGAA
TATCCCCGGCACTTTGGGCACGGATTACATCTGGCCTGATGCGACGGCTA
TCGCGACGCTGCATAGTGCTGGGATGAATATCTTCCGCGTGCCGTTCCTG
ATGGAGCGGTTGGTGCCGGATGAGTTGACTGGTGCGGCGGATGCGACGTA
TATGGCTGATCTGAAGGCTACGGTGCAAACCATCACAGACCTTGGTGCTT
ATGCGGTGGTGGATCCGCATAATTTTGGGAGATACTACGGTAACATCATC
ACCTCAACCAGCGACTTTGCAGCCTTCTGGACAACAGTCGCCAGCGAGTT
CACCGACAATGACCTTGTCATCTTCGATACCAACAACGAATTCCACGACG
AAGACCAAACCCTCGTGCTCGATCTCAATCAAGCCGCCATCACCGCCATC
CGCGCCACCGCTGCCACAACGCAATATATCTTCGTCGAAGGCAATTCCTA
CACCGGCGCCTGGACCTGGACCACCACCAACACGAACCTCGTCAACCTGA
CCGACCCCAACGACCATCTCATCTACGAAATGCACCAGTACCTGGACAGC
GATGGCTCCGGGACGAGTTCGACGTGCGTCAGCTCGACAATTGGTGCGGA
GCGCATTGCTGATGCCACAACCTGGTTGAAAGAGAATGGCAAGCAGGCGG
TGCTGGGGGAGTTCGCGGGCGGCGCGAATAGTGTATGTGAGGAGGCGGTT
ACAGGCATGTTGGATGCGATGGTGGATGCTAGTGATGTTTGGCTGGGGGG
CATGTGGTGGTCTGCTGGGCCTTGGTGGGGGGATTATATCTTCTCGTTGG
AGCCCGATGATGGAATTGCTTATGAGTATTATTTGGGGGTGTTGGAGGGG
TATACGCCTGGTTCATCTTCGGGATCATCTGGAGGGAGTACAACAAGTGC
CGTGGCGAGTGCTAGTAGTACGTCGTCTGCTGGGAGTACTACGAGCAAAG
TGACTACTACTACTGCTGCGACTGCTACATCGACGGCTGTAGCTGCGCAC
TATGCTCAGTGTGGTGGGGAGGGCTGGACTGGGGCGACGACTTGTGCGGA
TGGATATACCTGCACAGTAGAAAATGAGTGGTATTCGCAGTGTTTGTAGA
TGAAGACTCTCTCCCTTGCCGCTGTCTTGCTCGTCCAAGCCTGGACTGCG
AACAGCAGTCCGAGGGCTAAGCGGTCGTCTGGTTTCCAATGGTTCGGTAG
CAACGAATCCGGCGCCGAATTTGGCTCCGGGAATATCCCCGGCACTTTGG
GCACGGATTACATCTGGCCTGATGCGACGGCTATCGCGACGCTGCATAGT
GCTGGGATGAATATCTTCCGCGTGCCGTTCCTGATGGAGCGGTTGGTGCC
GGATGAGTTGACTGGTGCGGCGGATGCGACGTATATGGCTGATCTGAAGG
CTACGGTGCAAACCATCACAGACCTTGGTGCTTATGCGGTGGTGGATCCG
CATAATTTTGGGAGATACTACGGTAACATCATCACCTCAACCAGCGACTT
TGCAGCCTTCTGGACAACAGTCGCCAGCGAGTTCACCGACAATGACCTTG
TCATCTTCGATACCAACAACGAATTCCACGACGAAGACCAAACCCTCGTG
CTCGATCTCAATCAAGCCGCCATCACCGCCATCCGCGCCACCGCTGCCAC
AACGCAATATATCTTCGTCGAAGGCAATTCCTACACCGGCGCCTGGACCT
GGACCACCACCAACACGAACCTCGTCAACCTGACCGACCCCAACGACCAT
CTCATCTACGAAATGCACCAGTACCTGGACAGCGATGGCTCCGGGACGAG
TTCGACGTGCGTCAGCTCGACAATTGGTGCGGAGCGCATTGCTGATGCCA
CAACCTGGTTGAAAGAGAATGGCAAGCAGGCGGTGCTGGGGGAGTTCGCG
GGCGGCGCGAATAGTGTATGTGAGGAGGCGGTTACAGGCATGTTGGATGC
GATGGTGGATGCTAGTGATGTTTGGCTGGGGGGCATGTGGTGGTCTGCTG
GGCCTTGGTGGGGGGATTATATCTTCTCGTTGGAGCCCGATGATGGAATT
GCTTATGAGTATTATTTGGGGGTGTTGGAGGGGTATACGCCTGGTTCATC
TTCGGGATCATCTGGAGGGAGTACAACAAGTGCCGTGGCGAGTGCTAGTA
GTACGTCGTCTGCTGGGAGTACTACGAGCAAAGTGACTACTACTACTGCT
GCGACTGCTACATCGACGGCTGTAGCTGCGCACTATGCTCAGTGTGGTGG
GGAGGGCTGGACTGGGGCGACGACTTGTGCGGATGGATATACCTGCACAG
TAGAAAATGAGTGGTATTCGCAGTGTTTGTAGATGAAGACTCTCTCCCTT
GCCGCTGTCTTGCTCGTCCAAGCCTGGACTGCGAACAGCAGTCCGAGGGC
TAAGCGGTCGTCTGGTTTCCAATGGTTCGGTAGCAACGAATCCGGCGCCG
AATTTGGCTCCGGGAATATCCCCGGCACTTTGGGCACGGATTACATCTGG
CCTGATGCGACGGCTATCGCGACGCTGCATAGTGCTGGGATGAATATCTT
CCGCGTGCCGTTCCTGATGGAGCGGTTGGTGCCGGATGAGTTGACTGGTG
CGGCGGATGCGACGTATATGGCTGATCTGAAGGCTACGGTGCAAACCATC
ACAGACCTTGGTGCTTATGCGGTGGTGGATCCGCATAATTTTGGGAGATA
CTACGGTAACATCATCACCTCAACCAGCGACTTTGCAGCCTTCTGGACAA
CAGTCGCCAGCGAGTTCACCGACAATGACCTTGTCATCTTCGATACCAAC
AACGAATTCCACGACGAAGACCAAACCCTCGTGCTCGATCTCAATCAAGC
CGCCATCACCGCCATCCGCGCCACCGCTGCCACAACGCAATATATCTTCG
TCGAAGGCAATTCCTACACCGGCGCCTGGACCTGGACCACCACCAACACG
AACCTCGTCAACCTGACCGACCCCAACGACCATCTCATCTACGAAATGCA
CCAGTACCTGGACAGCGATGGCTCCGGGACGAGTTCGACGTGCGTCAGCT
CGACAATTGGTGCGGAGCGCATTGCTGATGCCACAACCTGGTTGAAAGAG
AATGGCAAGCAGGCGGTGCTGGGGGAGTTCGCGGGCGGCGCGAATAGTGT
ATGTGAGGAGGCGGTTACAGGCATGTTGGATGCGATGGTGGATGCTAGTG
ATGTTTGGCTGGGGGGCATGTGGTGGTCTGCTGGGCCTTGGTGGGGGGAT
TATATCTTCTCGTTGGAGCCCGATGATGGAATTGCTTATGAGTATTATTT
GGGGGTGTTGGAGGGGTATACGCCTGGTTCATCTTCGGGATCATCTGGAG
GGAGTACAACAAGTGCCGTGGCGAGTGCTAGTAGTACGTCGTCTGCTGGG
AGTACTACGAGCAAAGTGACTACTACTACTGCTGCGACTGCTACATCGAC
GGCTGTAGCTGCGCACTATGCTCAGTGTGGTGGGGAGGGCTGGACTGGGG
CGACGACTTGTGCGGATGGATATACCTGCACAGTAGAAAATGAGTGGTAT
TCGCAGTGTTTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0030248 | cellulose binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH5 |
| Note | CAZy:GH5_5 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR035971 |
| DBxref | InterPro:IPR001547 |
| DBxref | InterPro:IPR000254 |
| DBxref | PFAM:PF00150 |
| DBxref | PFAM:PF00734 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2743874..2745337 + |
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