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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2746204..2747389+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000937-T1 ID=CBS51388_000937-T1|Name=CBS51388_000937-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1186bp|location=Sequence derived from alignment at An01:2746204..2747389+ (Aspergillus niger CBS 513.88)
ATGAAGCATCATCTTATGGTCGGTACCTGGACCCCTCCAGGCCGCATCTA
CACCGTCGCCTTTGACGATGAGGCCCTCACCCTCGACCTGGTCAAGAAGA
CCGACATCCCCGAGGCTGAGCCCATCTCCTGGATGACCTTCTCGGTAGGC
ATGACCTTCAATGCTTCCTTTACTGCTCCCCGCTCACTCCCCTCCAGCAT
GACAAGAAAGCCATCTATGGCGCCGCCATGAAGAAGTGGAACAGCTTCGC
CGTCCACAGCCCAACTGAGATTGTCCACCAAGCCTCTCACCCTGTCGCTG
GTCACGGTGTGTATTCTCCCTTCTATTAGCCCTCCTGAATCCTGCTAATT
CCTCAGAACTCGCCGCCAGCGCCGACACTAACACCCGCGCCATCTTCGTC
CTCGCCGCCCACAAGCCCCCCTACAACGTCTACGGCAACCCCTTCTACAA
ATACGCCGGCTACGGCAACGTCTTCTCCGCTGGCCCCGATGGCGCTCTCC
TCGAGAACATCCAGAACTACGAGTACGAGCCCAACACCGGCATCCACGGC
ATGGTCTTCGACCCCACCGAAACCTACCTCTACTCCGCCGATCTCCAGGC
CAACAAGATCTGGACACACTTGAAGGACCCCGAAACCGGCAAGCTGACCC
TGATCGACTGCATCGAGGCTCCCTCTCCCGATGACCACCCCCGCTGGGTC
GAGATGCACCCTAGCGGCAAATACCTCTACGCCCTGATGGAAGCTGGCAA
CCGCCTGGCCGTGTACGTCATCGACGAGCGCACCCACAAGCCCGTCTTCA
CCCACATCACATACCCCCTGTTGCCCCAGGGTCTGCCCCCGCGCAACAAG
TACCGCGGCGACGTCACCTTCACCACCCGCAGCGGCGAGTACCTCTTTGC
TACGACCCGTAGTAACCACTTCGATGTCACGGGATACATTACGGCGTTCA
AGCTGGGGCCCAATGGCAACATCGAGAAGCAGCTGTTCATCCACCCTACT
TCGACGAGTGGTGGACACTCGAATGCGGTTAGCCCGTGCGATTTCAGTGA
TGAGTGGTTGGCGCTGTGCGATGACCAGCTTGGATTTGTCGAGATCTACC
GCTTCAAGGATGAGACCCTGGCTCGGGTTGCTCGCGTGGATATCCCTGAG
AAGGGATTCGGTATGAATGCGATTTGGTATGATTAA back to topCoding sequence (CDS) from alignment at An01:2746204..2747389+ >CBS51388_000937-T1 ID=CBS51388_000937-T1|Name=CBS51388_000937-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3249bp|location=Sequence derived from alignment at An01:2746204..2747389+ (Aspergillus niger CBS 513.88)
ATGAAGCATCATCTTATGGTCGGTACCTGGACCCCTCCAGGCCGCATCTA
CACCGTCGCCTTTGACGATGAGGCCCTCACCCTCGACCTGGTCAAGAAGA
CCGACATCCCCGAGGCTGAGCCCATCTCCTGGATGACCTTCTCGCATGAC
AAGAAAGCCATCTATGGCGCCGCCATGAAGAAGTGGAACAGCTTCGCCGT
CCACAGCCCAACTGAGATTGTCCACCAAGCCTCTCACCCTGTCGCTGGTC
ACGAACTCGCCGCCAGCGCCGACACTAACACCCGCGCCATCTTCGTCCTC
GCCGCCCACAAGCCCCCCTACAACGTCTACGGCAACCCCTTCTACAAATA
CGCCGGCTACGGCAACGTCTTCTCCGCTGGCCCCGATGGCGCTCTCCTCG
AGAACATCCAGAACTACGAGTACGAGCCCAACACCGGCATCCACGGCATG
GTCTTCGACCCCACCGAAACCTACCTCTACTCCGCCGATCTCCAGGCCAA
CAAGATCTGGACACACTTGAAGGACCCCGAAACCGGCAAGCTGACCCTGA
TCGACTGCATCGAGGCTCCCTCTCCCGATGACCACCCCCGCTGGGTCGAG
ATGCACCCTAGCGGCAAATACCTCTACGCCCTGATGGAAGCTGGCAACCG
CCTGGCCGTGTACGTCATCGACGAGCGCACCCACAAGCCCGTCTTCACCC
ACATCACATACCCCCTGTTGCCCCAGGGTCTGCCCCCGCGCAACAAGTAC
CGCGGCGACGTCACCTTCACCACCCGCAGCGGCGAGTACCTCTTTGCTAC
GACCCGTAGTAACCACTTCGATGTCACGGGATACATTACGGCGTTCAAGC
TGGGGCCCAATGGCAACATCGAGAAGCAGCTGTTCATCCACCCTACTTCG
ACGAGTGGTGGACACTCGAATGCGGTTAGCCCGTGCGATTTCAGTGATGA
GTGGTTGGCGCTGTGCGATGACCAGCTTGGATTTGTCGAGATCTACCGCT
TCAAGGATGAGACCCTGGCTCGGGTTGCTCGCGTGGATATCCCTGAGAAG
GGATTCGGTATGAATGCGATTTGGTATGATTAAATGAAGCATCATCTTAT
GGTCGGTACCTGGACCCCTCCAGGCCGCATCTACACCGTCGCCTTTGACG
ATGAGGCCCTCACCCTCGACCTGGTCAAGAAGACCGACATCCCCGAGGCT
GAGCCCATCTCCTGGATGACCTTCTCGCATGACAAGAAAGCCATCTATGG
CGCCGCCATGAAGAAGTGGAACAGCTTCGCCGTCCACAGCCCAACTGAGA
TTGTCCACCAAGCCTCTCACCCTGTCGCTGGTCACGAACTCGCCGCCAGC
GCCGACACTAACACCCGCGCCATCTTCGTCCTCGCCGCCCACAAGCCCCC
CTACAACGTCTACGGCAACCCCTTCTACAAATACGCCGGCTACGGCAACG
TCTTCTCCGCTGGCCCCGATGGCGCTCTCCTCGAGAACATCCAGAACTAC
GAGTACGAGCCCAACACCGGCATCCACGGCATGGTCTTCGACCCCACCGA
AACCTACCTCTACTCCGCCGATCTCCAGGCCAACAAGATCTGGACACACT
TGAAGGACCCCGAAACCGGCAAGCTGACCCTGATCGACTGCATCGAGGCT
CCCTCTCCCGATGACCACCCCCGCTGGGTCGAGATGCACCCTAGCGGCAA
ATACCTCTACGCCCTGATGGAAGCTGGCAACCGCCTGGCCGTGTACGTCA
TCGACGAGCGCACCCACAAGCCCGTCTTCACCCACATCACATACCCCCTG
TTGCCCCAGGGTCTGCCCCCGCGCAACAAGTACCGCGGCGACGTCACCTT
CACCACCCGCAGCGGCGAGTACCTCTTTGCTACGACCCGTAGTAACCACT
TCGATGTCACGGGATACATTACGGCGTTCAAGCTGGGGCCCAATGGCAAC
ATCGAGAAGCAGCTGTTCATCCACCCTACTTCGACGAGTGGTGGACACTC
GAATGCGGTTAGCCCGTGCGATTTCAGTGATGAGTGGTTGGCGCTGTGCG
ATGACCAGCTTGGATTTGTCGAGATCTACCGCTTCAAGGATGAGACCCTG
GCTCGGGTTGCTCGCGTGGATATCCCTGAGAAGGGATTCGGTATGAATGC
GATTTGGTATGATTAAATGAAGCATCATCTTATGGTCGGTACCTGGACCC
CTCCAGGCCGCATCTACACCGTCGCCTTTGACGATGAGGCCCTCACCCTC
GACCTGGTCAAGAAGACCGACATCCCCGAGGCTGAGCCCATCTCCTGGAT
GACCTTCTCGCATGACAAGAAAGCCATCTATGGCGCCGCCATGAAGAAGT
GGAACAGCTTCGCCGTCCACAGCCCAACTGAGATTGTCCACCAAGCCTCT
CACCCTGTCGCTGGTCACGAACTCGCCGCCAGCGCCGACACTAACACCCG
CGCCATCTTCGTCCTCGCCGCCCACAAGCCCCCCTACAACGTCTACGGCA
ACCCCTTCTACAAATACGCCGGCTACGGCAACGTCTTCTCCGCTGGCCCC
GATGGCGCTCTCCTCGAGAACATCCAGAACTACGAGTACGAGCCCAACAC
CGGCATCCACGGCATGGTCTTCGACCCCACCGAAACCTACCTCTACTCCG
CCGATCTCCAGGCCAACAAGATCTGGACACACTTGAAGGACCCCGAAACC
GGCAAGCTGACCCTGATCGACTGCATCGAGGCTCCCTCTCCCGATGACCA
CCCCCGCTGGGTCGAGATGCACCCTAGCGGCAAATACCTCTACGCCCTGA
TGGAAGCTGGCAACCGCCTGGCCGTGTACGTCATCGACGAGCGCACCCAC
AAGCCCGTCTTCACCCACATCACATACCCCCTGTTGCCCCAGGGTCTGCC
CCCGCGCAACAAGTACCGCGGCGACGTCACCTTCACCACCCGCAGCGGCG
AGTACCTCTTTGCTACGACCCGTAGTAACCACTTCGATGTCACGGGATAC
ATTACGGCGTTCAAGCTGGGGCCCAATGGCAACATCGAGAAGCAGCTGTT
CATCCACCCTACTTCGACGAGTGGTGGACACTCGAATGCGGTTAGCCCGT
GCGATTTCAGTGATGAGTGGTTGGCGCTGTGCGATGACCAGCTTGGATTT
GTCGAGATCTACCGCTTCAAGGATGAGACCCTGGCTCGGGTTGCTCGCGT
GGATATCCCTGAGAAGGGATTCGGTATGAATGCGATTTGGTATGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR019405 |
| DBxref | PFAM:PF10282 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2746204..2747389 + |
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