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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2754291..2755164+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000939-T1 ID=CBS51388_000939-T1|Name=CBS51388_000939-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=874bp|location=Sequence derived from alignment at An01:2754291..2755164+ (Aspergillus niger CBS 513.88)
ATGATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCCGT
ACTGCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGGGTC
AGTTGATGGGCAGTGTAGTAGTGTACAAGGCTTTGGATATTGCCGGAAGC
CGAGGATATAAGAATTGCTTCATCTCTCAGTGGCCATTCTCTGCATTGCC
TCTGGTGGTGCAGCTGTCCTCCCCGAAAGCCCGACGTATCTCATTCGAAA
AGATCGAATAAGCGCGGCTCGCAAATCACAGCGACGACTGGATTCCGGCC
CTATCGAATCGCATTATCAATCCGAGCAACTACGCTCGTTCATTGAAAAA
GAAGATCAAGATGCAGCCAGCAAGGCGACTGGGTACCGTGACTGCTTCAC
AGGCGTCGACCGCCGGCGTACCATGATCGTTATGTTTGCAAGCCTCATCC
CATCGCTTTTTGGTTTGCCCTTCCTATTCCAAGACTAGTTACTTTCTGCA
AATAGTCGGCATGAGGCATGAGAGCTTTCTGTTCTCACAAGCTGGCATCG
GACTGGGGTTGGCAGCTAACCTAGTCAGCATGCAGACACTGTGTAATTAT
GGCCGTGTGCCTCTGCTTATTGTCAGATTAAGCGTCCCGACGCTCGTCTG
GATGAGCATAAGGGCTGCCGGCTGTTTCCTGGGAACTACTAGCGCCTGGT
AAGTTGTCTGGAATGGATATGCGAAAACAAGGCCAATGGTCGTTCAGGTA
CACGGGGATCACACTAGTGACGGTAATCACGACCTGCGGTATTGGTGTAT
GGCCAACATCCTACGCTGTCGGTGGAGAAGCATCCTCTCTGCGGCTTCGT
GCCAAGTCCCAAGCTGTGGGCTGA back to topCoding sequence (CDS) from alignment at An01:2754291..2755164+ >CBS51388_000939-T1 ID=CBS51388_000939-T1|Name=CBS51388_000939-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2796bp|location=Sequence derived from alignment at An01:2754291..2755164+ (Aspergillus niger CBS 513.88)
ATGATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCCGT
ACTGCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGGTGG
CCATTCTCTGCATTGCCTCTGGTGGTGCAGCTGTCCTCCCCGAAAGCCCG
ACGTATCTCATTCGAAAAGATCGAATAAGCGCGGCTCGCAAATCACAGCG
ACGACTGGATTCCGGCCCTATCGAATCGCATTATCAATCCGAGCAACTAC
GCTCGTTCATTGAAAAAGAAGATCAAGATGCAGCCAGCAAGGCGACTGGG
TACCGTGACTGCTTCACAGGCGTCGACCGCCGGCGTACCATGATCGTTAT
GTTTGCAAGCCTCATCCCATCGCTTTTTGTCGGCATGAGGCATGAGAGCT
TTCTGTTCTCACAAGCTGGCATCGGACTGGGGTTGGCAGCTAACCTAGTC
AGCATGCAGACACTGTGTAATTATGGCCGTGTGCCTCTGCTTATTGTCAG
ATTAAGCGTCCCGACGCTCGTCTGGATGAGCATAAGGGCTGCCGGCTGTT
TCCTGGGAACTACTAGCGCCTGGTACACGGGGATCACACTAGTGACGGTA
ATCACGACCTGCGGTATTGGTGTATGGCCAACATCCTACGCTGTCGGTGG
AGAAGCATCCTCTCTGCGGCTTCGTGCCAAGTCCCAAGCTGTGGGCTGAA
TGATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCCGTA
CTGCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGGTGGC
CATTCTCTGCATTGCCTCTGGTGGTGCAGCTGTCCTCCCCGAAAGCCCGA
CGTATCTCATTCGAAAAGATCGAATAAGCGCGGCTCGCAAATCACAGCGA
CGACTGGATTCCGGCCCTATCGAATCGCATTATCAATCCGAGCAACTACG
CTCGTTCATTGAAAAAGAAGATCAAGATGCAGCCAGCAAGGCGACTGGGT
ACCGTGACTGCTTCACAGGCGTCGACCGCCGGCGTACCATGATCGTTATG
TTTGCAAGCCTCATCCCATCGCTTTTTGTCGGCATGAGGCATGAGAGCTT
TCTGTTCTCACAAGCTGGCATCGGACTGGGGTTGGCAGCTAACCTAGTCA
GCATGCAGACACTGTGTAATTATGGCCGTGTGCCTCTGCTTATTGTCAGA
TTAAGCGTCCCGACGCTCGTCTGGATGAGCATAAGGGCTGCCGGCTGTTT
CCTGGGAACTACTAGCGCCTGGTACACGGGGATCACACTAGTGACGGTAA
TCACGACCTGCGGTATTGGTGTATGGCCAACATCCTACGCTGTCGGTGGA
GAAGCATCCTCTCTGCGGCTTCGTGCCAAGTCCCAAGCTGTGGGCTGAAT
GATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCCGTAC
TGCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGGTGGCC
ATTCTCTGCATTGCCTCTGGTGGTGCAGCTGTCCTCCCCGAAAGCCCGAC
GTATCTCATTCGAAAAGATCGAATAAGCGCGGCTCGCAAATCACAGCGAC
GACTGGATTCCGGCCCTATCGAATCGCATTATCAATCCGAGCAACTACGC
TCGTTCATTGAAAAAGAAGATCAAGATGCAGCCAGCAAGGCGACTGGGTA
CCGTGACTGCTTCACAGGCGTCGACCGCCGGCGTACCATGATCGTTATGT
TTGCAAGCCTCATCCCATCGCTTTTTGTCGGCATGAGGCATGAGAGCTTT
CTGTTCTCACAAGCTGGCATCGGACTGGGGTTGGCAGCTAACCTAGTCAG
CATGCAGACACTGTGTAATTATGGCCGTGTGCCTCTGCTTATTGTCAGAT
TAAGCGTCCCGACGCTCGTCTGGATGAGCATAAGGGCTGCCGGCTGTTTC
CTGGGAACTACTAGCGCCTGGTACACGGGGATCACACTAGTGACGGTAAT
CACGACCTGCGGTATTGGTGTATGGCCAACATCCTACGCTGTCGGTGGAG
AAGCATCCTCTCTGCGGCTTCGTGCCAAGTCCCAAGCTGTGGGCTGAATG
ATCACAGGCACGACGCAGACATACATGTTTGAGATCTTGCCTCCCGTACT
GCGAGGCCCCATGCTGGCCTTCTTTCCGATCTTCATCCTCCTGGTGGCCA
TTCTCTGCATTGCCTCTGGTGGTGCAGCTGTCCTCCCCGAAAGCCCGACG
TATCTCATTCGAAAAGATCGAATAAGCGCGGCTCGCAAATCACAGCGACG
ACTGGATTCCGGCCCTATCGAATCGCATTATCAATCCGAGCAACTACGCT
CGTTCATTGAAAAAGAAGATCAAGATGCAGCCAGCAAGGCGACTGGGTAC
CGTGACTGCTTCACAGGCGTCGACCGCCGGCGTACCATGATCGTTATGTT
TGCAAGCCTCATCCCATCGCTTTTTGTCGGCATGAGGCATGAGAGCTTTC
TGTTCTCACAAGCTGGCATCGGACTGGGGTTGGCAGCTAACCTAGTCAGC
ATGCAGACACTGTGTAATTATGGCCGTGTGCCTCTGCTTATTGTCAGATT
AAGCGTCCCGACGCTCGTCTGGATGAGCATAAGGGCTGCCGGCTGTTTCC
TGGGAACTACTAGCGCCTGGTACACGGGGATCACACTAGTGACGGTAATC
ACGACCTGCGGTATTGGTGTATGGCCAACATCCTACGCTGTCGGTGGAGA
AGCATCCTCTCTGCGGCTTCGTGCCAAGTCCCAAGCTGTGGGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.4 |
| Note | antiSMASH:Cluster_1.5 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR005828 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2754291..2755164 + |
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