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CBS51388_000950-T1, CBS51388_000950-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000950-T1
Unique NameCBS51388_000950-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2781617..2783417+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000950-T1 ID=CBS51388_000950-T1|Name=CBS51388_000950-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1801bp|location=Sequence derived from alignment at An01:2781617..2783417+ (Aspergillus niger CBS 513.88)
ATGACGCAGATCCCTGCGGGCAAGTCTACAGGAGGCGTTCTCCAGATCCC
CGCCGCTGCGACTCAGAAGAATGCCTCTGCGCCGCCAAAGAAGGCTCCAA
AGCCAGCCGCGCCTCGATTGAAGCTCCTCGTCAGACGTCTGCCACCCGGA
CTAACACAAGCGGAATTCGAGACAGCGTTGGGCTCGGAATGGAAGGTTGG
CGGTGGGAAGGTCGACTGGTTCCAATACAAGCCAGGAAAGGTCTCTAAAG
AGTAAGCTAGCATTGTAACCTGTGAAGACTTTCGCTAACAGTATGCTGTA
TAGTCCAGCCAAACCTTCTCGGCCTTCGCGTGCGTATATCCATGTCATGT
CCAGCGATCACACCATCCCGCTCTCGAACAAAGTCCGCCAAACGTCTTTC
TTGGACGCCCGTAATACCTCAACCGATCCTGTCCTTTTGGGACCTCCATC
TTTGGAATTCGCACCTTATGCCAAGATTGCCGGAAACCGTTCGCGCAAAG
ACGCCCGTCAAGGAACTATCGACCAAGACCCCGAGTTCATCGCTTTTCTC
GAGAGCCTCACGCAACCACTTGCCAAACCGGCTCCTGTCGAGTCTGGCGC
TGATGGGGAGGATAAGAAGGAGACGGTGACTGTTACGCCTTTGGTGCAGT
ACATCAGAGAGAAGAAGGCCAACAAGGCGAAGGAATCCAGCAAATCTAAA
CACAAGTCGGACAAGGACTCCAAGGGGGAGAAGATCCAGGCGAAGAAGTT
GCTACAACGTCCTGACAGGGATACAAAGGACTCTGCTGCTACGGAGAAAC
CCGAGAAGAAATCCAAGTCCGACAAAGCTACCAAGGAAGCTGTGAAGGCC
GCAAACAAGCAGGCTGCTAATGTTGCTGCCAAGCAAGCCGCGAAATCATC
TCCAGCGCAAAACTCACCCAAGGATACGCCACAGACATCTACAGAGCGGA
AACGCGAACGTGGAAGTGTCGCGGCTGCTGCCAAGATCCTCCAGCGCGAC
CTGGGGCTTGCTCCGTCCGGTCGCCGCAGGGGTGGCAAAGCAGCGGCCGT
TGATGGAGATACGCCCAAGTCTGATCAGAGCGGAACTGCAACCCCAGATA
CGAGCAAGAAGGAGACGCCGTCCAGACCTTCCAAGGGGGCGAACTCGGCT
CGGGACAAGTCCAAGGGCAGCAACACACAACCACCCAGTGAGCCATCCGA
AGCAAGCACTCCAGTCAGTACTACACCTAAGCCGGGAAAGTCTGGGAAGG
GGAAGCAAGCATCGGCAGGACCGGCAGCGACCGCTACCCAAGCATTCCTC
AAGCACGCCAACCCATCTCAGGGCGTTACCGAGCCACTTCTGGAAGCCGC
ATTCGCGCCATTCGGAAAGGTTCTCAAAGTGGAGATTGATAAGAAGAAAG
GATTCGGCTACATTGATTTCGCAGAACCCGACGGACTTCAAAAGGCCATT
GCTGCTAGTCCTGTCTCGGTCGCGCAGAGTCAAGTTGTCGTGCTAGAGAG
AAAGGCCAACCCCGGTGGAGAGAAGGGCCGCGGCAAAGGCCGCAGTGAAG
CCCAAGCATCCTCGGGAGGCGGCGGCGGCGGTGGTGGTGGTGGCGGTGGT
GGTAACAATAGCCGGGGGAATAAGTCCAATGAAAGCGGCTCGGGGGGCAA
CTCATCTCGTGGACCACGCGGTGGACGAGGGTCCAAGGGCAAGGGAGCCC
CCAAGGGAGGAGGAGGCGGAGGAGGAGGAAACAGTGGTGGAAATGCCGGG
GCTGCGAATGGGAATCACCCTGAGAGCAAGGGGGGTTCAGATAGTAAATG
A
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Coding sequence (CDS) from alignment at An01:2781617..2783417+

>CBS51388_000950-T1 ID=CBS51388_000950-T1|Name=CBS51388_000950-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3498bp|location=Sequence derived from alignment at An01:2781617..2783417+ (Aspergillus niger CBS 513.88)
ATGACGCAGATCCCTGCGGGCAAGTCTACAGGAGGCGTTCTCCAGATCCC
CGCCGCTGCGACTCAGAAGAATGCCTCTGCGCCGCCAAAGAAGGCTCCAA
AGCCAGCCGCGCCTCGATTGAAGCTCCTCGTCAGACGTCTGCCACCCGGA
CTAACACAAGCGGAATTCGAGACAGCGTTGGGCTCGGAATGGAAGGTTGG
CGGTGGGAAGGTCGACTGGTTCCAATACAAGCCAGGAAAGGTCTCTAAAG
ATCCAGCCAAACCTTCTCGGCCTTCGCGTGCGTATATCCATGTCATGTCC
AGCGATCACACCATCCCGCTCTCGAACAAAGTCCGCCAAACGTCTTTCTT
GGACGCCCGTAATACCTCAACCGATCCTGTCCTTTTGGGACCTCCATCTT
TGGAATTCGCACCTTATGCCAAGATTGCCGGAAACCGTTCGCGCAAAGAC
GCCCGTCAAGGAACTATCGACCAAGACCCCGAGTTCATCGCTTTTCTCGA
GAGCCTCACGCAACCACTTGCCAAACCGGCTCCTGTCGAGTCTGGCGCTG
ATGGGGAGGATAAGAAGGAGACGGTGACTGTTACGCCTTTGGTGCAGTAC
ATCAGAGAGAAGAAGGCCAACAAGGCGAAGGAATCCAGCAAATCTAAACA
CAAGTCGGACAAGGACTCCAAGGGGGAGAAGATCCAGGCGAAGAAGTTGC
TACAACGTCCTGACAGGGATACAAAGGACTCTGCTGCTACGGAGAAACCC
GAGAAGAAATCCAAGTCCGACAAAGCTACCAAGGAAGCTGTGAAGGCCGC
AAACAAGCAGGCTGCTAATGTTGCTGCCAAGCAAGCCGCGAAATCATCTC
CAGCGCAAAACTCACCCAAGGATACGCCACAGACATCTACAGAGCGGAAA
CGCGAACGTGGAAGTGTCGCGGCTGCTGCCAAGATCCTCCAGCGCGACCT
GGGGCTTGCTCCGTCCGGTCGCCGCAGGGGTGGCAAAGCAGCGGCCGTTG
ATGGAGATACGCCCAAGTCTGATCAGAGCGGAACTGCAACCCCAGATACG
AGCAAGAAGGAGACGCCGTCCAGACCTTCCAAGGGGGCGAACTCGGCTCG
GGACAAGTCCAAGGGCAGCAACACACAACCACCCAGTGAGCCATCCGAAG
CAAGCACTCCAGTCAGTACTACACCTAAGCCGGGAAAGTCTGGGAAGGGG
AAGCAAGCATCGGCAGGACCGGCAGCGACCGCTACCCAAGCATTCCTCAA
GCACGCCAACCCATCTCAGGGCGTTACCGAGCCACTTCTGGAAGCCGCAT
TCGCGCCATTCGGAAAGGTTCTCAAAGTGGAGATTGATAAGAAGAAAGGA
TTCGGCTACATTGATTTCGCAGAACCCGACGGACTTCAAAAGGCCATTGC
TGCTAGTCCTGTCTCGGTCGCGCAGAGTCAAGTTGTCGTGCTAGAGAGAA
AGGCCAACCCCGGTGGAGAGAAGGGCCGCGGCAAAGGCCGCAGTGAAGCC
CAAGCATCCTCGGGAGGCGGCGGCGGCGGTGGTGGTGGTGGCGGTGGTGG
TAACAATAGCCGGGGGAATAAGTCCAATGAAAGCGGCTCGGGGGGCAACT
CATCTCGTGGACCACGCGGTGGACGAGGGTCCAAGGGCAAGGGAGCCCCC
AAGGGAGGAGGAGGCGGAGGAGGAGGAAACAGTGGTGGAAATGCCGGGGC
TGCGAATGGGAATCACCCTGAGAGCAAGGGGGGTTCAGATAGTAAATGAA
TGACGCAGATCCCTGCGGGCAAGTCTACAGGAGGCGTTCTCCAGATCCCC
GCCGCTGCGACTCAGAAGAATGCCTCTGCGCCGCCAAAGAAGGCTCCAAA
GCCAGCCGCGCCTCGATTGAAGCTCCTCGTCAGACGTCTGCCACCCGGAC
TAACACAAGCGGAATTCGAGACAGCGTTGGGCTCGGAATGGAAGGTTGGC
GGTGGGAAGGTCGACTGGTTCCAATACAAGCCAGGAAAGGTCTCTAAAGA
TCCAGCCAAACCTTCTCGGCCTTCGCGTGCGTATATCCATGTCATGTCCA
GCGATCACACCATCCCGCTCTCGAACAAAGTCCGCCAAACGTCTTTCTTG
GACGCCCGTAATACCTCAACCGATCCTGTCCTTTTGGGACCTCCATCTTT
GGAATTCGCACCTTATGCCAAGATTGCCGGAAACCGTTCGCGCAAAGACG
CCCGTCAAGGAACTATCGACCAAGACCCCGAGTTCATCGCTTTTCTCGAG
AGCCTCACGCAACCACTTGCCAAACCGGCTCCTGTCGAGTCTGGCGCTGA
TGGGGAGGATAAGAAGGAGACGGTGACTGTTACGCCTTTGGTGCAGTACA
TCAGAGAGAAGAAGGCCAACAAGGCGAAGGAATCCAGCAAATCTAAACAC
AAGTCGGACAAGGACTCCAAGGGGGAGAAGATCCAGGCGAAGAAGTTGCT
ACAACGTCCTGACAGGGATACAAAGGACTCTGCTGCTACGGAGAAACCCG
AGAAGAAATCCAAGTCCGACAAAGCTACCAAGGAAGCTGTGAAGGCCGCA
AACAAGCAGGCTGCTAATGTTGCTGCCAAGCAAGCCGCGAAATCATCTCC
AGCGCAAAACTCACCCAAGGATACGCCACAGACATCTACAGAGCGGAAAC
GCGAACGTGGAAGTGTCGCGGCTGCTGCCAAGATCCTCCAGCGCGACCTG
GGGCTTGCTCCGTCCGGTCGCCGCAGGGGTGGCAAAGCAGCGGCCGTTGA
TGGAGATACGCCCAAGTCTGATCAGAGCGGAACTGCAACCCCAGATACGA
GCAAGAAGGAGACGCCGTCCAGACCTTCCAAGGGGGCGAACTCGGCTCGG
GACAAGTCCAAGGGCAGCAACACACAACCACCCAGTGAGCCATCCGAAGC
AAGCACTCCAGTCAGTACTACACCTAAGCCGGGAAAGTCTGGGAAGGGGA
AGCAAGCATCGGCAGGACCGGCAGCGACCGCTACCCAAGCATTCCTCAAG
CACGCCAACCCATCTCAGGGCGTTACCGAGCCACTTCTGGAAGCCGCATT
CGCGCCATTCGGAAAGGTTCTCAAAGTGGAGATTGATAAGAAGAAAGGAT
TCGGCTACATTGATTTCGCAGAACCCGACGGACTTCAAAAGGCCATTGCT
GCTAGTCCTGTCTCGGTCGCGCAGAGTCAAGTTGTCGTGCTAGAGAGAAA
GGCCAACCCCGGTGGAGAGAAGGGCCGCGGCAAAGGCCGCAGTGAAGCCC
AAGCATCCTCGGGAGGCGGCGGCGGCGGTGGTGGTGGTGGCGGTGGTGGT
AACAATAGCCGGGGGAATAAGTCCAATGAAAGCGGCTCGGGGGGCAACTC
ATCTCGTGGACCACGCGGTGGACGAGGGTCCAAGGGCAAGGGAGCCCCCA
AGGGAGGAGGAGGCGGAGGAGGAGGAAACAGTGGTGGAAATGCCGGGGCT
GCGAATGGGAATCACCCTGAGAGCAAGGGGGGTTCAGATAGTAAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000950CBS51388_000950Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000950-T1.exon1CBS51388_000950-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000950-T1.exon2CBS51388_000950-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000950-T1.cdsCBS51388_000950-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000950-T1CBS51388_000950-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_1.4
NoteantiSMASH:Cluster_1.5
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR005120
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF03467
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2781617..2783417 +
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